prot_S-firma_F_contig108.1071.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig108.1071.1
Unique Nameprot_S-firma_F_contig108.1071.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length304
Homology
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BLAST of mRNA_S-firma_F_contig108.1071.1 vs. uniprot
Match: D8LKZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ0_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 1.210e-129
Identity = 190/231 (82.25%), Postives = 207/231 (89.61%), Query Frame = 0 
Query:   46 PRTHPWCSIPGCTERPLRQYLSAPTNQIVFMCKTHFNTVPASTREGWKQYRGTRTFPETRIAVSCRPGPNRGHGTAAVXXXXXXXXTEVDPGYTNHPDDEKASRGASKSALWPGKVYNVLYQVWNAHAERKKISTGDGYMTSCNRAALVPEAANVLREQGLPEMANILDNTTEGARKVIHSRVLAKYLKNREAFTAKIRTIGLDPPEVAEWEAALNAAQHHADLAPSRERD 276
            P  +PWCS+ GCTERPLRQY +A + QI+FMCKTHFNTVP STREGWKQYRGTRTFPE+RIA SCRPGP RG G A  XXXXXXXX+EVDPGYTNHPDDEK +RG +KSALWPGKVYNVLYQVWNA AE+KKIS+GDGYMTS +RAALVP+AANVLREQG PEMA ILDNTTEGARKVIHSRVLAKYLKNRE F+AK+R IGLDP E+AEW+AAL AAQHHADLAP RERD
Sbjct:    2 PECYPWCSVAGCTERPLRQYTAASSKQIMFMCKTHFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGLGAAXXXXXXXXXXSEVDPGYTNHPDDEKGNRGPTKSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNREIFSAKLRNIGLDPTEIAEWDAALVAAQHHADLAP-RERD 231
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BLAST of mRNA_S-firma_F_contig108.1071.1 vs. uniprot
Match: A0A6H5L718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L718_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 9.660e-107
Identity = 169/229 (73.80%), Postives = 186/229 (81.22%), Query Frame = 0 
Query:   74 VFMCKTHFNTVPASTREGWKQYRGTRTFPETRIAVSCRPGPNRGHGTAAVXXXXXXXXTEVDPGYTNHPDDEKASRGASKSALWPGKVYNVLYQVWNAHAERKKISTGDGYMTSCNRAALVPEAANVLREQGLPEMANILDNTTEGARKVIHSRVLAKYLKNREAFTAKIRTIGLDPPEVAEWEAALNAAQHHADLAPSRERDS------LTYSHSGGAHAQSPLQKDA 296
            +FMCKT FNTVP STREGWKQYRGTRTFPE+RIA SCRPGP RGHG A  XXXXX   +EVDPG+TNHPDDEK +RG + SALWPGKVYNVLYQVWNA AE+KKIS+GDGYMTS +RAALVP+AANVLR+QG PEMA ILDNTTEGARKVI SRVLAKYLKNRE F+AK+R IGLDP E+AEW+ AL AAQHHADLAP RERD       L+  H    H     + DA
Sbjct:    1 MFMCKTRFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGHGAAXXXXXXX---SEVDPGHTNHPDDEKGNRGPTNSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLRDQGHPEMATILDNTTEGARKVIRSRVLAKYLKNREVFSAKLRNIGLDPTEIAEWDVALVAAQHHADLAP-RERDQPHSAVPLSLPHHSSPHCHQQQEGDA 225
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig108.1071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKZ0_ECTSI1.210e-12982.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L718_9PHAE9.660e-10773.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig108contigS-firma_F_contig108:13781..16905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig108.1071.1mRNA_S-firma_F_contig108.1071.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig108 13781..16905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig108.1071.1 ID=prot_S-firma_F_contig108.1071.1|Name=mRNA_S-firma_F_contig108.1071.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=304bp
MAHQLGAPLPGVPPQQPQQYGHELHQQHGHEGLEELDGTRVPRNCPRTHP
WCSIPGCTERPLRQYLSAPTNQIVFMCKTHFNTVPASTREGWKQYRGTRT
FPETRIAVSCRPGPNRGHGTAAVAAAAAAAATEVDPGYTNHPDDEKASRG
ASKSALWPGKVYNVLYQVWNAHAERKKISTGDGYMTSCNRAALVPEAANV
LREQGLPEMANILDNTTEGARKVIHSRVLAKYLKNREAFTAKIRTIGLDP
PEVAEWEAALNAAQHHADLAPSRERDSLTYSHSGGAHAQSPLQKDAPGGP
ADGG
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