prot_S-firma_F_contig1075.1012.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1075.1012.1
Unique Nameprot_S-firma_F_contig1075.1012.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length1679
Homology
BLAST of mRNA_S-firma_F_contig1075.1012.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 1.640e-170
Identity = 708/1573 (45.01%), Postives = 797/1573 (50.67%), Query Frame = 0
Query:    1 MDGPWARVGYGGKEDGWVLTANKRGAMLTAADDQAAAGELWSDQERNASTAAGHDGPAADDGQPHPGDDRPIGGRRPTHHPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVDSDGXXXXXXXXXXXALPAGGLKPWQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAAPEGP-DAEAAVAAGGEGFDEVEGGATSGVPAAAPAKPWLKKRRPVGA---GAASASSVFGDGADVVVAAKPWQAAAAVKGAAGAAAVADASPGGEAAAPGERERDDVAGGDGGVAGLEACLGDRDWKKRVAAFEAATRACREGGKGAAGTVGPLLPRMLLDKNVQAVDAAVDTLTAYLSLRWSTMGAEEGAALASALAERALCCGRGPVEAKADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRAVSGCVRAMSAGMKERAGFAGAGGDSRKEVYAAAKSMLGSSKLPVRMAGVSLSAALYAAEGTVVKNDLGLEDLESRIKAQVERAFADADADAAGAPAADGPPVAASEEPLPAPPSPPIRPRAAPXXXXXXXXXXXXXTIDD--LLADND-TLDLLTPXXXXXPHPSAGRTLGAALAEPTASXXXXXXXXXXXXXXXXXXXXXVTEEDVADARAAPAADDLLSEDALESDGDYEDAAESAGIATAAXXXXXXXXXXXXXXAV------------------AAMPDLRVTTSPPFDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRRTLGERLAAARDRAGSGAAAAGGAPETPQSFARRRSDASAARPSTPGYHRASAKKTGVRSAVDRETQFLGTQMLVLPEGERSAWDDILADVLLKAPPANPTRWRRHRLSADGAATHAALRAGGAGGSLASPRRLLDGGGHRDREHG----RHDAMPXXXXXXXXXXXXXXXXXXXXXXXXXLLAPGTFGTAED----GGRSGRASSGFGVDSGSDERSVGWRRERAASDGSDNHGDRRRRRPSTEESAPL--PEASLASPLREGEQERGAAELGPESAPSWTQSQQA----LAMRSSADESVRERMAKFGARRQARQAQEQLAXXXXXXXXXXXXXXXXXNTDDEMAAAVGTANIVATSGRRHLLRGPGSWTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------SNLVVTQAALGNLTNNLAS-MKITSSQPTSGNRESRRQSISRRLSRGASMGAGRV--VVRDAPDLGAVEEAEAVALGASPAXXXXXXXXXXXXXXXXXRRRVAEQRLANRRSLNYQVAVEAQEEPVDLGTVLDDGVVDRRRGDDERGYSGRREPRRSSPRPGRPGRLPPADNALESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFFAQRGEDFHVHXXXXXRYSAAASPVSWDTDTPLDSPRSGSDSDAAYDSLRGVLSKVSLSKYFKGFRRREVRLEDLRHLTEADLTEMGMPVGARKRLLVEVHGVATPTSTAALPTP 1520
            M G WARV Y G  DGWVLT NKRG MLTAA+DQ  A   W++QE+NA    G+D        P   DDRPIGG+R T H                           G +D+             A P+GGLKPWQR                     XXXXX                          XXXXXXXXX   A   P D+ A V  GGE  D     A +              +RP G    GA   SS    G D  V AKPW+AAA     A +  V +A+        G  E    AG + G+AGLEAC  +RDWKKRVA FEAA+RAC    +GA  TVGPLLPRML DKNVQAVDAAV+TLTAYLSLR S MGAEEG++LASALAERALCCGR PVEAKADAA                                                            AP+AVSGCVRAMSAGM +       GGDSR+EVY+AAK+MLGSSKLPV+MAG+SLS+ALYAAEG V ++DLG+E +E+RIK+Q+ERAFADA                        P SPPIRP A  XXXXXXXXXXXXX      LL DND  L+LLTP       P A R     LAEP   XXXXXXXXXXX            E   +        D+L SED                     XXXXXXXXXXXXXX                    A +PDLR+T SPP  D                              R  L ERL++ R     G AAAG A ETP+ F            STPGY R SAKK GVR++V+RETQFLGTQMLVLPEGERSAWDDIL D+LLKAPPA+P RW +HRLSADG                 +P  +  GGG     HG      DA+   XXXXXXXXXXXXXXXXXXXXX  LL P +  +  D    G  SGR S GF V S SD+R                            E+APL  PE+  AS    GE++ G      ES PSW + QQ     LA+RSSADESVRERMA+  ARR  RQ+++  A                 + D E  AA   AN+VAT+GRRHLLRGPGSWTSG                     XXXXXXXX           SNLVVTQ ALGNL NNLAS M +     TS NRESR+QSISRRLSRGAS+G  R   V  +A +LGA EEAEAVALGASP XXXXXXXXXXX      R R  E R A+RRS        ++     L    D+ VVD       RG       R  S        + PAD  LESE                 XXXXXXXXXXXXXXXXXXXXX                     FF Q+G D +       RYS  ++P +          RSGSDSDAAYDSLRGVL KVSLSKYFK FRRREVRLEDL+HLTE DLTEMGMPVG RKRLLVEVHG+ TP  T    TP
Sbjct: 1690 MKGLWARVAYRGNTDGWVLTENKRGKMLTAAEDQEEAEAAWAEQEQNAWQDDGNDNVP-----PASRDDRPIGGKRSTQHDGFDPGADSGRLETTGAASSPSGNGGGGVLDTWSQAAVGTDGGPAAPPSGGLKPWQRRRKVASSRKPAEVQGGAEHAEXXXXXPPAKPWQRRGAAKSDPLADGSEGAVTXXXXXXXXXXXKAGALPKDSTAEV--GGEAGDS----AAAADXXXXXXXXXXXXKRPGGGVRVGAVDGSSSGKPGGDDAVVAKPWEAAAR----AASETVEEAAVVPVGVERGAGEGVGGAGREDGLAGLEACFEERDWKKRVAVFEAASRACHSRVEGATATVGPLLPRMLQDKNVQAVDAAVETLTAYLSLR-SNMGAEEGSSLASALAERALCCGRAPVEAKADAAAATLLAGAGGTGGLARRGAWLTLAARAGGLENEFFPPAGEEGGLGRSKVAAA--------APKAVSGCVRAMSAGMGKGRTIVAGGGDSREEVYSAAKAMLGSSKLPVKMAGISLSSALYAAEGDVARDDLGVEGMEARIKSQLERAFADAXXXXXXXX------XXXXXXXXXXPASPPIRPPATXXXXXXXXXXXXXXXXXAIYLLGDNDGNLELLTPP------PPAPRVPEQRLAEPRGXXXXXXXXXXXXEGVAPLGGSEPAEAAKSGIPEPTVDDELWSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDGLSADLPDLRITISPPEGDGSLAAPPRGAGEVGRAK------------ARLGLAERLSSER-----GLAAAGAAAETPRGF------------STPGY-RGSAKKRGVRTSVERETQFLGTQMLVLPEGERSAWDDILDDMLLKAPPADPLRWSQHRLSADG-----------------TPGIVGPGGG--SAPHGARPDEEDALKLMXXXXXXXXXXXXXXXXXXXXXA-LLRPDSLRSVGDDDGVGSGSGRGSMGFEVGSDSDDRXXXXXXXXXXXXXXXXXX--------XXEAAPLSLPESFSAS-FGRGEED-GPVGTTAESRPSWNEQQQQRQDMLAVRSSADESVRERMARLSARR--RQSRQATAPRTGEEPLQKAPADSAMD-DGEGGAA---ANVVATAGRRHLLRGPGSWTSGIGSGSGPGGVRSPRLSRAGHGXXXXXXXXXXXXXGSPSSSSNLVVTQEALGNLNNNLASLMSVKRQASTSENRESRKQSISRRLSRGASLGTFRATAVATEAAELGAAEEAEAVALGASPXXXXXXXXXXXXETIAA-RHRALEMRRASRRSRGGDAPGGSEGA---LREFQDESVVDLSPA--ARGXXXXXXXRLGS--------ILPADTVLESEEESYATPRGGRCSSESVXXXXXXXXXXXXXXXXXXXXXGQETSRGHGGSG---------FFGQQGSDPYRRKG---RYSTISTPNATXXXXXXXXXRSGSDSDAAYDSLRGVLGKVSLSKYFKEFRRREVRLEDLQHLTEGDLTEMGMPVGPRKRLLVEVHGITTPVRTPVAATP 3134          
BLAST of mRNA_S-firma_F_contig1075.1012.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 2.020e-65
Identity = 280/557 (50.27%), Postives = 312/557 (56.01%), Query Frame = 0
Query:    5 WARVGYGGKEDGWVLTANKRGAMLTAADDQAAAGELWSDQERNASTAAGHDGPAADDGQPHPGDDRPIGGRRPTHHPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVDSDGXXXXXXXXXXXALPAGGLKPWQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPK----AAPEGPDAEAAVAAGGEGFDEVEGGATSGVPAAAPAKPWLKKRRPVGAGAASASSVFGDGADVVVAAKPWQAAAAVKGAAGAAAVADASPGGEAAAPGERERDDVAGGDGGVAGLEACLGDRDWKKRVAAFEAATRACREGGKGAAGTVGPLLPRMLLDKNVQAVDAAVDTLTAYLSLRWSTMGAEEGAALASALAERALCCGRGPVEAKADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRAVSGCVRAMSAGMKERAGFAGAGGDSRKEVYAAAKSMLGSSKLPVRMAGVSLSAALYAAEGTVVKNDLGLEDLESRIKAQ 557
            WARVGY GK DGWVLT NKRG MLTAA+DQ  A   W++QE+NAS   G+D        P   DDRPIGG+R T                   XXXXXXXXXX       XXXXXXXXXXX      LKPWQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   XXXXXXXXXXXXX      A P+   AE   +AG                                                 V AKPW+A A     A +  V +A+   E    G  E    AGG+ G+AGLEACL +RDWKKRVA FEAA+ ACR   +GAAG VGPLLPRML DKNVQAVDAAVDTLTAYLSLR STMGAEEG++LASALAERALCCGR PVEAKADAA                                                            AP+AV+GCVRAMSAGM +       GGDSRKEVY+AAK+MLGSSKLPV+MAG+SLS ALYAAEG V ++DLG+E +E+RIK+Q
Sbjct: 2054 WARVGYRGKTDGWVLTENKRGKMLTAAEDQEEAEAAWAEQEQNASQDDGNDNVP-----PASRDDRPIGGKRSTQLDGFDPGADSGGLETTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKPWQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPWQRRGAAKSDPLADGTXXXXXXXXXXXXXXTKKAGALPKDSTAEVGGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVAKPWEADAR----AASETVEEAAVMPEGVGRGAGEGGVSAGGEDGLAGLEACLEERDWKKRVAVFEAASLACRSRVEGAAGKVGPLLPRMLQDKNVQAVDAAVDTLTAYLSLR-STMGAEEGSSLASALAERALCCGRAPVEAKADAAAATLLAGAGGSGGLARRGAWLALAARAGGLENEFFPPGGEEGGRGRSKVAAA--------APKAVTGCVRAMSAGMGKGRTVVAGGGDSRKEVYSAAKAMLGSSKLPVKMAGISLSGALYAAEGDVARDDLGVEGMEARIKSQ 2592          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1075.1012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4T0_9PHAE1.640e-17045.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7L6_ECTSI2.020e-6550.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1076..1100
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 1446..1511
e-value: 0.0035
score: 26.6
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 1456..1507
e-value: 2.7E-5
score: 24.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 313..576
e-value: 1.0E-8
score: 37.3
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 1445..1515
e-value: 3.4E-11
score: 44.7
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 1451..1508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1075contigS-firma_F_contig1075:783..10303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1075.1012.1mRNA_S-firma_F_contig1075.1012.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1075 783..10303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1075.1012.1 ID=prot_S-firma_F_contig1075.1012.1|Name=mRNA_S-firma_F_contig1075.1012.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1679bp
MDGPWARVGYGGKEDGWVLTANKRGAMLTAADDQAAAGELWSDQERNAST
AAGHDGPAADDGQPHPGDDRPIGGRRPTHHPHPDPGAGDSNGSVSVSNND
DRGLGLGGGVDSDGGGTTTDAGAAAALPAGGLKPWQRRKKPALSSRKTAA
AAKPGGGGGGGAGGAGDDGAQEAGGTDPPLKPWQKKKKNTAAAAAAAAPK
AAPEGPDAEAAVAAGGEGFDEVEGGATSGVPAAAPAKPWLKKRRPVGAGA
ASASSVFGDGADVVVAAKPWQAAAAVKGAAGAAAVADASPGGEAAAPGER
ERDDVAGGDGGVAGLEACLGDRDWKKRVAAFEAATRACREGGKGAAGTVG
PLLPRMLLDKNVQAVDAAVDTLTAYLSLRWSTMGAEEGAALASALAERAL
CCGRGPVEAKADAAAAALLAGGGSGGGGGELARRGAWLVLAARAGGLENE
FFPPVSLEPGGGARKGAAAAAAAAAPRAVSGCVRAMSAGMKERAGFAGAG
GDSRKEVYAAAKSMLGSSKLPVRMAGVSLSAALYAAEGTVVKNDLGLEDL
ESRIKAQVERAFADADADAAGAPAADGPPVAASEEPLPAPPSPPIRPRAA
PAAGGSGEGGGGGGTIDDLLADNDTLDLLTPPPPPAPHPSAGRTLGAALA
EPTASAAAVRVASDDGGGGGGDGDDDVTEEDVADARAAPAADDLLSEDAL
ESDGDYEDAAESAGIATAAAAAEAAAAAALEDDAVAAMPDLRVTTSPPFD
DDDDDDGDGESQARSQAGGRGREASTSSSSTRRTLGERLAAARDRAGSGA
AAAGGAPETPQSFARRRSDASAARPSTPGYHRASAKKTGVRSAVDRETQF
LGTQMLVLPEGERSAWDDILADVLLKAPPANPTRWRRHRLSADGAATHAA
LRAGGAGGSLASPRRLLDGGGHRDREHGRHDAMPPPPPPVAAAAAATFSM
EPSSSSSSSLLAPGTFGTAEDGGRSGRASSGFGVDSGSDERSVGWRRERA
ASDGSDNHGDRRRRRPSTEESAPLPEASLASPLREGEQERGAAELGPESA
PSWTQSQQALAMRSSADESVRERMAKFGARRQARQAQEQLAQQQQQQQRA
RPSADDVDNTDDEMAAAVGTANIVATSGRRHLLRGPGSWTSGGGGGGPRS
PLLSRSGSTGGSSSLGSPSSSSNLVVTQAALGNLTNNLASMKITSSQPTS
GNRESRRQSISRRLSRGASMGAGRVVVRDAPDLGAVEEAEAVALGASPAA
ARAAADAAAASETLAIRRRVAEQRLANRRSLNYQVAVEAQEEPVDLGTVL
DDGVVDRRRGDDERGYSGRREPRRSSPRPGRPGRLPPADNALESEEEEEE
YATPRGGRGSSASIASGSSVGGSRRQHQGRRPSAADSDTSRERGGGGGGG
GGGRFFAQRGEDFHVHGGGGGRYSAAASPVSWDTDTPLDSPRSGSDSDAA
YDSLRGVLSKVSLSKYFKGFRRREVRLEDLRHLTEADLTEMGMPVGARKR
LLVEVHGVATPTSTAALPTPAVVVPSAASPPPPQQQQQPPPPPPLKTVRS
PRLSQSGGAASRSASSPGANEGASTAAEQMPAPRSLISRRSTTAPGVSAA
SLRARLAAQQPRQASPRPARKSLSPRPSSSGSTSPRPSLGATRARTASDS
AGGGGGAGAGGADSDESFESGRGSSGAVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR011989ARM-like
IPR001660SAM