prot_S-firma_F_contig107.948.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig107.948.1
Unique Nameprot_S-firma_F_contig107.948.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length389
Homology
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BLAST of mRNA_S-firma_F_contig107.948.1 vs. uniprot
Match: D8LE96_ECTSI (Ubiquitin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE96_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 1.510e-160
Identity = 291/415 (70.12%), Postives = 332/415 (80.00%), Query Frame = 0 
Query:    1 AFEEQHAPEAAAELMCAWASDSSKLLRPLSRMIVNGVDSTPFADVDSWLLALRAWLEVDDTLQVERYQLVLGNGKQEAEPRLLWLMYSQREKYEKWLFQVLMVLTELMAEHPGIGAYVSKLHSHETYPLADWMTKHLIETY----GTLRGVGPTRVKEMDLLQIKENLSAYDKQYLGQTAEERVLDMTRRARIGPAEGEPGVTRVESSSSNGVQVEMLDVMGDSAMMLGAAGA----------VKRFWRVTNHRMDSVNFTFKIDPTP----TMYSTRRPNFHLPMGREVKRRLEPQQTVGITEVDKLDLTREFQPHPFKWVFEAGTTPPPA------APXXXXXXXXXXXXXXXXX--------LSASDLLEQQAQMDGDLGEVARVALALEREEARELEAAAVAAAQKADEDE 383
            AFEE HAPEAAAELMCAWA+D+SKLLRPLSR+IV GVDSTPFADVDSWLLALRAWLEVDDTL+VERYQ+VLG GKQE EP+LL LM  Q+EKY+KWLF+VLMV++ELMAE+ GIGA+VSKL SHE  P ADWMTKHL++TY      L GVGP RVKEMDL+QIKENLSAY+K Y G TAEER++DMTRRARIGPAEGEPGVTRVESS+SNGVQVEMLD    + MMLGA G           +KRFWRVTNHRMDSV FTFKI+PTP    T+Y +RRPN+H+P GR+V   L+P++T GI EVDKLDLTREFQPHPF WVFEA    P A      APXXXXXXXXXXXXX            L+ASDLLE+QAQ++GDLGE ARVAL LE+EEA E +AAA+  A++A+E E
Sbjct: 3462 AFEEHHAPEAAAELMCAWAADASKLLRPLSRLIVQGVDSTPFADVDSWLLALRAWLEVDDTLKVERYQMVLGTGKQEVEPKLLLLMMLQQEKYDKWLFRVLMVVSELMAENAGIGAHVSKLRSHEMLPWADWMTKHLMDTYDAYGSALGGVGPLRVKEMDLIQIKENLSAYEKAYFGHTAEERLVDMTRRARIGPAEGEPGVTRVESSTSNGVQVEMLDATDTAMMMLGAGGGGHMTMAGGFPLKRFWRVTNHRMDSVTFTFKIEPTPSRLDTVYPSRRPNYHVPAGRDVTLLLKPRETAGIMEVDKLDLTREFQPHPFNWVFEALPETPTATEGAATAPXXXXXXXXXXXXXGEAVPTTVLPTALTASDLLEKQAQLEGDLGEAARVALKLEQEEAAEAQAAAIXXAKRAEEHE 3876
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig107.948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE96_ECTSI1.510e-16070.12Ubiquitin domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 358..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig107contigS-firma_F_contig107:51545..56773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig107.948.1mRNA_S-firma_F_contig107.948.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig107 51544..56773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig107.948.1 ID=prot_S-firma_F_contig107.948.1|Name=mRNA_S-firma_F_contig107.948.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=389bp
AFEEQHAPEAAAELMCAWASDSSKLLRPLSRMIVNGVDSTPFADVDSWLL
ALRAWLEVDDTLQVERYQLVLGNGKQEAEPRLLWLMYSQREKYEKWLFQV
LMVLTELMAEHPGIGAYVSKLHSHETYPLADWMTKHLIETYGTLRGVGPT
RVKEMDLLQIKENLSAYDKQYLGQTAEERVLDMTRRARIGPAEGEPGVTR
VESSSSNGVQVEMLDVMGDSAMMLGAAGAVKRFWRVTNHRMDSVNFTFKI
DPTPTMYSTRRPNFHLPMGREVKRRLEPQQTVGITEVDKLDLTREFQPHP
FKWVFEAGTTPPPAAPAPAPAAAAAAPAAPAAALSASDLLEQQAQMDGDL
GEVARVALALEREEARELEAAAVAAAQKADEDERLTEEL
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