prot_S-firma_F_contig10685.925.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10685.925.1
Unique Nameprot_S-firma_F_contig10685.925.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length143
Homology
BLAST of mRNA_S-firma_F_contig10685.925.1 vs. uniprot
Match: D7FSZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSZ1_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 7.310e-46
Identity = 90/143 (62.94%), Postives = 104/143 (72.73%), Query Frame = 0
Query:    1 QDLFDIVLAGPLVGLAASTAALLVGLQMTAAAGTEALAGFPSLPSSLLQGSSFVGSLVDAFLHTNLGAQDIVAERIAMHPLAVGGAVAMLWNAATVLPLPGSDGKTAIDTLNNELPVAAVASFLATTFVVRSRWGFCRYLFSV 143
            QDLFD+ +AGP VG A + AAL++GLQMTAAAG + LAGFPSLPSSLLQ SS VGS+VD FLHTNL  QD+  ER+AMHPLAVGG   MLW AATVLPLPGSDG+  IDTL+      A+ + LA  F V    G   +L SV
Sbjct:  449 QDLFDVAIAGPTVGFATAAAALVMGLQMTAAAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTNLAVQDLAVERVAMHPLAVGGVAGMLWTAATVLPLPGSDGEAVIDTLDTNFKYNAIVTPLAYLFAVSQIIGGGMFLLSV 591          
BLAST of mRNA_S-firma_F_contig10685.925.1 vs. uniprot
Match: A0A7S2A261_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A261_TRICV)

HSP 1 Score: 77.0 bits (188), Expect = 3.490e-14
Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 0
Query:    1 QDLFDIVLAGPLVGLAASTAALLVGLQMTAAAGTEALAGFPSLPSSLLQGSSFVGSLVDAFLHTN-LGAQDIVAERIAMHPLAVGGAVAMLWNAATVLPLPGSDGKTAIDTLNNELPVAAVASFLATTFVVRSRWG 135
              LFD  +AGPL GL AS A L+VGL+ T  +   ALA FP+LP S ++ SS VG +V   L    L   +   + IA+HPLAV G   ++ N+ ++LPL  +DG      L        V +F +   V+   +G
Sbjct:   84 NSLFDFAVAGPLAGLVASFALLVVGLESTLYSDAAALAQFPNLPISFVRSSSLVGGIVQGLLGDGILLTPNPALDTIALHPLAVAGFAGLMINSLSLLPLGNTDGGRVCQALFGRSWSRIVTTFTSLFMVLAGVFG 219          
BLAST of mRNA_S-firma_F_contig10685.925.1 vs. uniprot
Match: A0A7S2A296_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A296_TRICV)

HSP 1 Score: 77.0 bits (188), Expect = 1.150e-13
Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 0
Query:    1 QDLFDIVLAGPLVGLAASTAALLVGLQMTAAAGTEALAGFPSLPSSLLQGSSFVGSLVDAFLHTN-LGAQDIVAERIAMHPLAVGGAVAMLWNAATVLPLPGSDGKTAIDTLNNELPVAAVASFLATTFVVRSRWG 135
              LFD  +AGPL GL AS A L+VGL+ T  +   ALA FP+LP S ++ SS VG +V   L    L   +   + IA+HPLAV G   ++ N+ ++LPL  +DG      L        V +F +   V+   +G
Sbjct:  649 NSLFDFAVAGPLAGLVASFALLVVGLESTLYSDAAALAQFPNLPISFVRSSSLVGGIVQGLLGDGILLTPNPALDTIALHPLAVAGFAGLMINSLSLLPLGNTDGGRVCQALFGRSWSRIVTTFTSLFMVLAGVFG 784          
BLAST of mRNA_S-firma_F_contig10685.925.1 vs. uniprot
Match: R7Q4W8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4W8_CHOCR)

HSP 1 Score: 70.1 bits (170), Expect = 2.840e-11
Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 0
Query:    1 QDLFDIVLAGPLVGLAASTAALLVGLQMTAAAGTEALAGFPSLPSSLLQGSSFVGSLVDAFLHTNLGAQDIVAERIAMHPLAVGGAVAMLWNAATVLPLPGSDG 104
            +DLFD+ +AGPLVG  AS +AL+ GL +T++   +    FP +PS+L   S  VGSL D  L   L  Q      IA+HPLAV G   +L NA  ++P+   DG
Sbjct:  361 KDLFDVAVAGPLVGSVASISALIAGLLITSSG--QIADWFPQVPSALFHASILVGSLADIILPAGLREQ----ATIAVHPLAVVGYTGLLANALNLMPIGRLDG 458          
BLAST of mRNA_S-firma_F_contig10685.925.1 vs. uniprot
Match: A0A7S3P6Y7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6Y7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.040e-10
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    1 QDLFDIVLAGPLVGLAASTAALLVGLQMTAAAGTEALAGFPSLPSSLLQGSSFVGSLVDAFLHTN--------LGAQDIVAERIAMHPLAVGGAVAMLWNAATVLPLPGSDG 104
            Q +FD  +AGPLVG+ AS AA++VG Q++    T  L+  P++P  +L+ SS  G ++DA +           LG + +    I +HP+AV G + ++ NA  VLP+  +DG
Sbjct:  657 QAMFDFSVAGPLVGMVASIAAIVVGAQLSM---TSDLSMLPNMPLEILRQSSLGGGILDAIMGNGVLSVPDGALGTRAVATMTIPLHPVAVAGFIGLIVNALNVLPIGTTDG 765          
BLAST of mRNA_S-firma_F_contig10685.925.1 vs. uniprot
Match: A0A7J7IQ76_9RHOD (Peptidase M50 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQ76_9RHOD)

HSP 1 Score: 67.4 bits (163), Expect = 2.530e-10
Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 0
Query:    3 LFDIVLAGPLVGLAASTAALLVGLQMTAAAGTEALAGFPSLPSSLLQGSSFVGSLVDAFLHTNLGAQDIVAERIAMHPLAVGGAVAMLWNAATVLPLPGSDG 104
            LFD+ +AGP+ GLAAS  AL+ GL +TA  G+  L  FP +PS L   S  +G+L  A L  ++ +Q      IA+HPL V G   +L  A  +LP+  +DG
Sbjct:  437 LFDVAVAGPVAGLAASMLALIAGLILTAQQGSTPLDWFPQIPSGLFDASLLIGALGKAVLPQSVLSQ----PTIAVHPLCVVGYTGLLSQALQLLPVGRTDG 534          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10685.925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FSZ1_ECTSI7.310e-4662.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2A261_TRICV3.490e-1437.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2A296_TRICV1.150e-1337.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
R7Q4W8_CHOCR2.840e-1143.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3P6Y7_9STRA1.040e-1036.61Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7J7IQ76_9RHOD2.530e-1042.16Peptidase M50 n=1 Tax=Cyanidiococcus yangmingshane... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31412FAMILY NOT NAMEDcoord: 1..104
NoneNo IPR availablePANTHERPTHR31412:SF0ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATEDcoord: 1..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 81..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10685contigS-firma_F_contig10685:2882..4586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10685.925.1mRNA_S-firma_F_contig10685.925.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10685 2882..4586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10685.925.1 ID=prot_S-firma_F_contig10685.925.1|Name=mRNA_S-firma_F_contig10685.925.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=143bp
QDLFDIVLAGPLVGLAASTAALLVGLQMTAAAGTEALAGFPSLPSSLLQG
SSFVGSLVDAFLHTNLGAQDIVAERIAMHPLAVGGAVAMLWNAATVLPLP
GSDGKTAIDTLNNELPVAAVASFLATTFVVRSRWGFCRYLFSV
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