prot_S-firma_F_contig1066.894.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1066.894.1
Unique Nameprot_S-firma_F_contig1066.894.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length210
Homology
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BLAST of mRNA_S-firma_F_contig1066.894.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 9.600e-76
Identity = 142/216 (65.74%), Postives = 158/216 (73.15%), Query Frame = 0 
Query:    1 MVAAATDAGKRVPPT----GGAEATAKDGASRLPPT--EDKLLLACCRAIKKESGWQERTLRQACDWATGELERNQYPGAGLGRYYRVVELAMESNSEDVVETALGQLHKLVAGGLVRRRTMTTLKDGGSANLAEVLVGVVLRTGSKDKTVRRGGRAQAVRCLLSCVSSPEIQVHGEELRRAFAFVHETFLAIDSTANRAKYNKAQARATLDHILQ 210
            MV AA +AG   PPT    G   +   D ++  PP+  EDKLLLA CR I+KE+GWQERTLRQACDWATGELE+NQ+PG G+ RYYRVVELAM S SEDVVE ALGQLHKL+AGGLVRR TMTTLKDG SANL E+LVGVV+ TGS+DKTV                       HGEELR+   FVHETFL IDSTANRA+YNKAQARATLDHILQ
Sbjct:    1 MVVAA-EAGVHPPPTESDTGTNVSNNDDSSTGQPPSGGEDKLLLAMCRTIRKETGWQERTLRQACDWATGELEQNQHPGVGMARYYRVVELAMGSKSEDVVEAALGQLHKLIAGGLVRRNTMTTLKDGSSANLGEILVGVVMETGSRDKTV-----------------------HGEELRKVALFVHETFLVIDSTANRARYNKAQARATLDHILQ 192
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BLAST of mRNA_S-firma_F_contig1066.894.1 vs. uniprot
Match: A0A6H5KGZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ2_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 2.860e-12
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0 
Query:    1 MVAAATDAGKRVPPT----GGAEATAKDGASRLPPT--EDKLLLACCRAIKKESGWQERTLRQACDWATG 64
            MV AA +AG   PPT    G   +   D ++  PP+  EDKLLLA CR I+KE+GWQERTLRQACDWATG
Sbjct:    1 MVVAA-EAGVHPPPTESDTGTNVSNNDDSSTGQPPSGGEDKLLLAMCRTIRKETGWQERTLRQACDWATG 69
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1066.894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA1_ECTSI9.600e-7665.74BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax... [more]
A0A6H5KGZ2_9PHAE2.860e-1258.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1066contigS-firma_F_contig1066:818..3865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1066.894.1mRNA_S-firma_F_contig1066.894.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1066 818..4311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1066.894.1 ID=prot_S-firma_F_contig1066.894.1|Name=mRNA_S-firma_F_contig1066.894.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=210bp
MVAAATDAGKRVPPTGGAEATAKDGASRLPPTEDKLLLACCRAIKKESGW
QERTLRQACDWATGELERNQYPGAGLGRYYRVVELAMESNSEDVVETALG
QLHKLVAGGLVRRRTMTTLKDGGSANLAEVLVGVVLRTGSKDKTVRRGGR
AQAVRCLLSCVSSPEIQVHGEELRRAFAFVHETFLAIDSTANRAKYNKAQ
ARATLDHILQ
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