prot_S-firma_F_contig10652.883.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10652.883.1
Unique Nameprot_S-firma_F_contig10652.883.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length227
Homology
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BLAST of mRNA_S-firma_F_contig10652.883.1 vs. uniprot
Match: UPI0018D1DBFF (LOW QUALITY PROTEIN: neuroblastoma-amplified sequence n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D1DBFF)

HSP 1 Score: 61.6 bits (148), Expect = 2.390e-7
Identity = 64/240 (26.67%), Postives = 108/240 (45.00%), Query Frame = 0 
Query:    1 VTSVAHDAATDLLVIGGDSTWAPGAPPAVATSGVSMWRLFDGYPYYRLVGTAED-----GPPPVGLGVPRTMGTVPARAGAWVVRLVVSPDGAHVAGLDARGQARVWSAADGALLNVVLADN-----VVPRGEAAPAAPTPPTAAPHIPYVDVAWWSNDHLVLATSTGRVNVVPAATPATQDVLEPTPSGFLGAPCVVADADRGATLVLDCAR-TVQPR--RLQWAQLVDGGGGDSDDED 227
            V +VAH AA D L + G    +   P +   +G++ WR+    PYY+L   ++          + L +P     V ++  A++V++V+SPDG+H+  +   G+  VW       L ++   N     + P+ +      T           DV WWSN+ ++++   G V+V  ++     D+     + +L     VA     A + L+C R T QPR  R Q  +LV     D+D ED
Sbjct:  214 VAAVAHSAAHDTLYVAGVPRGSCKDPSSPLYAGLTAWRILSDDPYYKLSVVSDSLEAQMASDSLHLYIP----FVSSKNLAFIVQMVISPDGSHLLCVHCTGEVSVWR------LPLLKLQNRWPLAIQPQHDVDNPLETEEKREGMYHPADVDWWSNEDIIISRFNGAVSVCSSS-----DLAPLLQAQWLRGSARVASHSGAALVALECERSTHQPRAPRSQSTELVKQ---DADSED 435
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10652.883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0018D1DBFF2.390e-726.67LOW QUALITY PROTEIN: neuroblastoma-amplified seque... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 67..182
e-value: 7.0E-7
score: 30.1
NoneNo IPR availablePANTHERPTHR15922FAMILY NOT NAMEDcoord: 3..201
NoneNo IPR availableSUPERFAMILY69322Tricorn protease domain 2coord: 31..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10652contigS-firma_F_contig10652:1031..1795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10652.883.1mRNA_S-firma_F_contig10652.883.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10652 1031..1795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10652.883.1 ID=prot_S-firma_F_contig10652.883.1|Name=mRNA_S-firma_F_contig10652.883.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=227bp
VTSVAHDAATDLLVIGGDSTWAPGAPPAVATSGVSMWRLFDGYPYYRLVG
TAEDGPPPVGLGVPRTMGTVPARAGAWVVRLVVSPDGAHVAGLDARGQAR
VWSAADGALLNVVLADNVVPRGEAAPAAPTPPTAAPHIPYVDVAWWSNDH
LVLATSTGRVNVVPAATPATQDVLEPTPSGFLGAPCVVADADRGATLVLD
CARTVQPRRLQWAQLVDGGGGDSDDED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf