prot_S-firma_F_contig10627.856.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10627.856.1
Unique Nameprot_S-firma_F_contig10627.856.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length249
Homology
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BLAST of mRNA_S-firma_F_contig10627.856.1 vs. uniprot
Match: D7G0F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F9_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 2.100e-68
Identity = 137/253 (54.15%), Postives = 165/253 (65.22%), Query Frame = 0 
Query:    1 DNKAKIWVVRLLTSLLQSACPPKRPSSAXXXXXXXXXXXXATPGETEDLPGVGVGRLGDMFEPKGAVSILLDLAEKEAKLEEDRGADARSPLLQALVQACVVADECNKKRGLGAVARDGAGASFPEWPRRANTTRSDDNRSVRTEPGSPVVRSPLLAVPGYVAPAGTGGARMIRWHVKVLGLSSSSPR----IGVGQPQSPVEKSGLQRSPWLLTWDSAGTIQMTTWSGKGTRLSFGPQVKEGDVVTVEVDAV 249
            DNKAKIWVVRL++SLLQSAC PK    +                E  D       RL  MFEP G V +LL+LA+KEAK EED+G   RSPLLQALVQACVVADEC+KKRG GAV RDGA A FP W +RAN  RSDD+R VR+   + +  +PL+A PG+VAP G GG  +IRWHVKVL +S S PR    +GV QP + V   G     WLLTW   G +QM   +G+G  L +GP++K GD+VTVEVDA+
Sbjct:  201 DNKAKIWVVRLISSLLQSACSPKADGDSL---------------EAADWDD----RLEAMFEPAGPVPVLLELAKKEAKAEEDKGTSTRSPLLQALVQACVVADECDKKRGPGAVLRDGAEAVFPRWSQRANVERSDDDRLVRSTSNA-IDTAPLVATPGFVAPVGMGGRGVIRWHVKVLAVSESGPRSGLRLGVFQPNTSV---GCPS--WLLTWGCDGNLQM---AGQGMPLPYGPKIKTGDMVTVEVDAL 425
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BLAST of mRNA_S-firma_F_contig10627.856.1 vs. uniprot
Match: A0A6H5K114_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K114_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.270e-15
Identity = 52/98 (53.06%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:    1 DNKAKIWVVRLLTSLLQSACPPKRPSSAXXXXXXXXXXXXATPGETEDLPGVGVGRLGDMFEPKGAVSILLDLAEKEAKLEEDRGADARSPLLQALVQ 98
            DNKAKIWVVRL++SLLQSAC PK   ++                E  D       RL  MFEP G V +LL+LA+KEAK EED+G   RSPLLQALVQ
Sbjct: 4496 DNKAKIWVVRLISSLLQSACSPKADCNSL---------------EAADWDD----RLEAMFEPAGPVPVLLELAKKEAKAEEDKGISTRSPLLQALVQ 4574
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10627.856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0F9_ECTSI2.100e-6854.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K114_9PHAE1.270e-1553.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10627contigS-firma_F_contig10627:203..3014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10627.856.1mRNA_S-firma_F_contig10627.856.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10627 203..3016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10627.856.1 ID=prot_S-firma_F_contig10627.856.1|Name=mRNA_S-firma_F_contig10627.856.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=249bp
DNKAKIWVVRLLTSLLQSACPPKRPSSASAGAAGAAGAAAATPGETEDLP
GVGVGRLGDMFEPKGAVSILLDLAEKEAKLEEDRGADARSPLLQALVQAC
VVADECNKKRGLGAVARDGAGASFPEWPRRANTTRSDDNRSVRTEPGSPV
VRSPLLAVPGYVAPAGTGGARMIRWHVKVLGLSSSSPRIGVGQPQSPVEK
SGLQRSPWLLTWDSAGTIQMTTWSGKGTRLSFGPQVKEGDVVTVEVDAV
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