prot_S-firma_F_contig10626.855.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10626.855.1
Unique Nameprot_S-firma_F_contig10626.855.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length225
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10626.855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 85..98
score: 54.65
coord: 106..119
score: 45.79
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 1..89
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 1..89
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 58..144
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 58..144
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 6..146
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 106..130
e-value: 36.0
score: 8.7
coord: 10..33
e-value: 110.0
score: 4.6
coord: 58..81
e-value: 81.0
score: 5.8
coord: 82..105
e-value: 14.0
score: 12.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 84..143
e-value: 5.8E-9
score: 35.6
coord: 12..71
e-value: 6.3E-8
score: 32.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..166
e-value: 6.8E-46
score: 158.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10626contigS-firma_F_contig10626:266..4676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10626.855.1mRNA_S-firma_F_contig10626.855.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10626 266..4676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10626.855.1 ID=prot_S-firma_F_contig10626.855.1|Name=mRNA_S-firma_F_contig10626.855.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=225bp
GPISEALGTLAKLSKLNLGFNELTGCIPEALSAVTNLKKMSLNTNHLTGP
IPAALGALTNLTSLSLINNQLAGPIPEALGALASLAELDLSRNQLTGSIP
EALGALTNLTRLQLQSNQLSGTVPFSLWKLDSLTWAHVTHNRLTHFTDPE
EKTASMPVVLDCMSKRQWYTADNPWEFPPAAVMVNGPESIRKFYGTWEQC
DFALVEIHALKVVFVGAYGAGKTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp