prot_S-firma_F_contig10622.850.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10622.850.1
Unique Nameprot_S-firma_F_contig10622.850.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length466
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10622.850.1 vs. uniprot
Match: A0A813ARJ6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813ARJ6_9DINO)

HSP 1 Score: 317 bits (811), Expect = 3.020e-98
Identity = 184/471 (39.07%), Postives = 293/471 (62.21%), Query Frame = 0 
Query:    1 SETLKKRLTERWETIRRVLPPTFSGKFDREQFEIFLEANLLLLGFLSVCMGILLGIQWYASIRLRSALKAAAELD-EEAAEYGLPSEHRPNRMKVAWKRKWTHGSKSSRRCIKCICCGVLLAFILAIVLATLALYFATSCANFSSFSEDQSY-ENMGTDVFLHNSYTRGLTHVRPSVSLDTTAMYPTNTSVVFTKSAFRSGLQADGFPEVTNMSTL--YGFEAVPAAKTKVMGFDISCQLADLELALPPALVYSGNGFQESLSSPSLEFITISDRASVEYDLTLYQTVNRPRPKYVKMSTTSGPIDVAGALFGASGAVLVSDLGELSMKTSDAWCDEDTLGDSDFGVHMTSDRGSVSVEDSTFRNCDVFLEGSAALVFMDNVVMSNNGGGATLTVTGERGLIDLNNVQADVYAIQSDAGSVRVDSLNGTQ-FRVRGGAASTSGSVEALNLRMGA-GTVQAETDSGAITVHL 465
            ++T++  +++ W+++RRVLP TF+GK+D+EQFE F+ +NLL LGF+++ +G++L  QW ++ RLR ALK  A+++  +  E GL    +P  +++ WK++WTHGSK SRR I C CC   +   L + +A L+LYF+TSCA+   +   ++   + G DVF+ +S+TRG+     SVS+ +++  P N +  + K AFR       FP +   +TL   G +A P A T+V+GFD+SCQ A++++ALPPA  Y GN F ES  SPS+  ++ S  ASV+ D+      +RPR + +  +++ GP D+AG L GA G  + + LG++S++  D  CD   LG+ D+GV +++ +G++ V  S FR+CDV L    +L  +   V++N  GG T+ + G +GLID+    ADV++++ D GSV + ++ G +  +V    A+ SG V    L M   G VQ ET SG I+V L
Sbjct:   81 ADTVQGYVSDNWDSVRRVLPSTFAGKYDKEQFEKFIASNLLALGFMALVVGLVLTAQWESARRLRVALKIEADIEGRDEMEEGLTE--KPGAVQMLWKQRWTHGSKQSRRVIMCTCCCTAVCVSLILTMAVLSLYFSTSCASIGEYKASRTLTSDDGMDVFVDSSFTRGVV----SVSVASSSTAP-NATFTYEKGAFRKQYADTSFPALETDTTLGAEGIDADPKAPTQVLGFDVSCQFANVDVALPPAARYGGNSFAESERSPSVTLVSSSGLASVQADVRSVPEADRPRLRRLVSASSDGPTDLAGLLVGAEGLQVSTTLGDISLEDVDGACDPALLGEPDYGVDLSTQKGAIIVSSSAFRDCDVKLSAVQSLTEVVGSVVTNTNGGGTMYILGTKGLIDIRRSTADVFSVRGDEGSVVMSNVTGREAVKV----ATASGRVTLSRLAMAQRGVVQVETSSGDISVSL 540
[Close]
BLAST of mRNA_S-firma_F_contig10622.850.1 vs. uniprot
Match: A0A5A8CWG0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CWG0_CAFRO)

HSP 1 Score: 75.1 bits (183), Expect = 1.400e-10
Identity = 32/76 (42.11%), Postives = 58/76 (76.32%), Query Frame = 0 
Query:    1 SETLKKRLTERWETIRRVLPPTFSGKFDREQFEIFLEANLLLLGFLSVCMGILLGIQWYASIRLRSALKAAAELDE 76
            ++T++ +L  +W+ IRR+LPP+FSGK+D+ QF+ F++ NL  +GF+++C GI+L IQ +A+ RLR  +K   ++++
Sbjct:  292 ADTVRDQLLAQWDDIRRILPPSFSGKYDQGQFQAFVDTNLKAIGFMALCAGIILLIQLWAATRLRGEIKRMNDVED 367
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10622.850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A813ARJ6_9DINO3.020e-9839.07Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A5A8CWG0_CAFRO1.400e-1042.11Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025164Putative adhesinPFAMPF13349DUF4097coord: 343..465
e-value: 1.3E-6
score: 27.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..466
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..60
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10622contigS-firma_F_contig10622:3378..5004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10622.850.1mRNA_S-firma_F_contig10622.850.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10622 3378..5004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10622.850.1 ID=prot_S-firma_F_contig10622.850.1|Name=mRNA_S-firma_F_contig10622.850.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=466bp
SETLKKRLTERWETIRRVLPPTFSGKFDREQFEIFLEANLLLLGFLSVCM
GILLGIQWYASIRLRSALKAAAELDEEAAEYGLPSEHRPNRMKVAWKRKW
THGSKSSRRCIKCICCGVLLAFILAIVLATLALYFATSCANFSSFSEDQS
YENMGTDVFLHNSYTRGLTHVRPSVSLDTTAMYPTNTSVVFTKSAFRSGL
QADGFPEVTNMSTLYGFEAVPAAKTKVMGFDISCQLADLELALPPALVYS
GNGFQESLSSPSLEFITISDRASVEYDLTLYQTVNRPRPKYVKMSTTSGP
IDVAGALFGASGAVLVSDLGELSMKTSDAWCDEDTLGDSDFGVHMTSDRG
SVSVEDSTFRNCDVFLEGSAALVFMDNVVMSNNGGGATLTVTGERGLIDL
NNVQADVYAIQSDAGSVRVDSLNGTQFRVRGGAASTSGSVEALNLRMGAG
TVQAETDSGAITVHLA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025164DUF4097