prot_S-firma_F_contig10584.793.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10584.793.1
Unique Nameprot_S-firma_F_contig10584.793.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length181
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10584.793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.904
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10584contigS-firma_F_contig10584:1217..1986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10584.793.1mRNA_S-firma_F_contig10584.793.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10584 925..5070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10584.793.1 ID=prot_S-firma_F_contig10584.793.1|Name=mRNA_S-firma_F_contig10584.793.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=181bp
MAGRSTSSLVPVIVVLVFLLAGLVAGAPSDAHLVGAAADDIVPHGTMLRR
ALQTTTSESECAAEQIACTSDASCPECSLAFGGALLGDCGDVDDDATCSD
AQEAFCCAIDVASDDCIDNDAFDDWIGCQVENSAFLSICEVEISDCSGAS
GRSSSWGAACIFLCSTAVAGALVSTFGIVV*
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