prot_S-firma_F_contig1055.759.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1055.759.1
Unique Nameprot_S-firma_F_contig1055.759.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length250
Homology
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 6.330e-140
Identity = 206/250 (82.40%), Postives = 235/250 (94.00%), Query Frame = 0
Query:    1 MGLAALVAGVAVGAAPANAAAGTAVEVMRLRFGDKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGMATTKAIIKLETSSALGMREIKVVPLDYVAKTIEQQGITN-KTSKRMRTVS 249
            + LAA+  G A GAAPA A AG+AVEVMRLRFGDKLRRAAKMLDELQ+DI+N DWDLV+TYPNAFR+LVPVFTKYTDAAFPT+DPVDTTSRVALRYEVGRF+GAVERLKRAAE+QN+REAQ+AFAAMSVAYDRYLKAGNLYDGYD+VTSTEGFYA VSN++LK+VPPSKDPPKI+DNVLL+AGPDKGKTG++IG+EGG ++ TKAI+KLETSSALGMREIKVVPLDYVAKT++QQG+ N KT+K+MR  S
Sbjct:   99 LSLAAVAMGGATGAAPAKAQAGSAVEVMRLRFGDKLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAKTVDQQGMFNSKTTKKMRPSS 348          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK)

HSP 1 Score: 246 bits (628), Expect = 7.540e-78
Identity = 135/229 (58.95%), Postives = 162/229 (70.74%), Query Frame = 0
Query:   14 AAPANAAAGTAVEVMRLRFGDKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGME----GGGMATTKAIIKLETS--SALGMREIKVVPLDYVAKTIEQQG 236
            A PA AA   A E     +GD+LRR A+ LDELQ DI N+DW+ V+TYP  FR+ VPVFT+YTDA F  E   D  SRVALRYEVGR FGAVERLKRAAE+++ REAQ AFA +SVAYDRYLKAG LYD YD VTSTE F+A V ++ L+F PP+ DPPKI+D VLL AGPDKGKTG +IG+E      G      I+KL+ +      +REIKVVP   VAK ++ +G
Sbjct:   69 ALPAAAAPAPAKEAALKGYGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 297          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC)

HSP 1 Score: 234 bits (596), Expect = 1.660e-72
Identity = 118/222 (53.15%), Postives = 165/222 (74.32%), Query Frame = 0
Query:   16 PANAAAGTAVEVMRLRFGDKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGMATTK--AIIKLETSSALGMREIKVVPLDYVAKTIEQQ 235
            P+ AA  TA   +  +   ++R+ A +LDELQ DI ++DWD++++YP   R+ VP+FTKYTD+AFP +DPVD  +R ALRYEVGR FG+VERLKRA ++++ RE + AFAAMSV++DRYLKAG+LY+ YD + STE F+ GV ++ L +VPP +DPPKI+D VLLL GPDKGKTG ++G+EG  +A  K   ++KL+T     +RE+KVVP  ++AK   +Q
Sbjct:   95 PSEAAKNTA---LAQKIAPRIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVG-SIRELKVVPYAFIAKRKGEQ 312          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK)

HSP 1 Score: 242 bits (617), Expect = 3.680e-71
Identity = 128/211 (60.66%), Postives = 155/211 (73.46%), Query Frame = 0
Query:   32 FGDKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGME----GGGMATTKAIIKLETS--SALGMREIKVVPLDYVAKTIEQQG 236
            +GD+LRR A+ LDELQ DI N+DW+ V+TYP  FR+ VPVFT+YTDA F  E   D  SRVALRYEVGR FGAVERLKRAAE+++ REAQ AFA +SVAYDRYLKAG LYD YD VTSTE F+A V ++ L+F PP+ DPPKI+D VLL AGPDKGKTG +IG+E      G      I+KL+ +      +REIKVVP   VAK ++ +G
Sbjct:  596 YGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 806          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: A0A7R9UEJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEJ4_9STRA)

HSP 1 Score: 215 bits (548), Expect = 4.880e-67
Identity = 101/166 (60.84%), Postives = 131/166 (78.92%), Query Frame = 0
Query:   31 RFGDKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGME 196
            R G+K+RR A++LD+LQ DI  +DW  +STYP   RS VP+FTKYTD AFP+E  +DT +R ALRYEVGRFFGAVERLKRA + ++  EA+ +FA +S+++DRYLKAGNLY+ YD + STE FY G+ + +L FVPPS + PK +D VLL+AGPDKGKTG +IG+E
Sbjct:   39 RAGEKIRRIARILDDLQRDIFEEDWTFISTYPVELRSFVPIFTKYTDTAFPSESAIDTQTRFALRYEVGRFFGAVERLKRAVDSRDIGEAEASFAQISISFDRYLKAGNLYEQYDPIVSTEKFYEGIPDKDLVFVPPSAETPKTRDPVLLIAGPDKGKTGLLIGIE 204          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: B7FPD1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPD1_PHATC)

HSP 1 Score: 194 bits (492), Expect = 3.550e-57
Identity = 100/204 (49.02%), Postives = 136/204 (66.67%), Query Frame = 0
Query:   32 FGDKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGMATTKAIIKLETSSALGMREIKVVPLDYVAKTIEQQ 235
               K+R    ++DELQ D+  + WDLV +YP   RS VPVFT YTD+AFP++ P D   RVALRYEVGRFF +VER K+AA  Q   EA  A++ M++ +DRYL+ G LY  YD   STE ++ G+++  L +  P  DPP ++D V+L+ GP+KGKTG +IGM   G  T K++IKL+     GMREI+VV  D+VAK + +Q
Sbjct:  110 LASKIRNIGSVMDELQRDLMQERWDLVESYPAQLRSFVPVFTTYTDSAFPSDAPTDKGLRVALRYEVGRFFASVERFKQAASRQALDEAYLAYSEMALHFDRYLRVGGLYTYYDDSISTEPYFQGIADDALVYSDPKTDPPFVRDLVILVRGPEKGKTGIIIGMYSDG--TNKSVIKLDRYK--GMREIRVVANDWVAKRLGEQ 309          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: B8BUB6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUB6_THAPS)

HSP 1 Score: 194 bits (493), Expect = 4.580e-57
Identity = 99/204 (48.53%), Postives = 135/204 (66.18%), Query Frame = 0
Query:   32 FGDKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGMATTKAIIKLETSSALGMREIKVVPLDYVAKTIEQQ 235
              +K+R  +K++DELQ D+  + WDLV  YPN  RS VPVFT YTD+AFPT+ P D   RVALRYEVGRFF ++ERLK A   ++  EA  A++ MS+ +DRYL+ G LY  YD   S E ++ G   TNL +V P KDP  ++D ++L  GPDKG+TG VIG+   G  T   ++KL+ +   G+REI+VVP  + AK + +Q
Sbjct:  132 LSNKIRGVSKVMDELQRDLMQERWDLVENYPNQLRSYVPVFTSYTDSAFPTDIPTDQGLRVALRYEVGRFFASLERLKTATSRRSINEAYVAYSDMSLHFDRYLRVGGLYTFYDDTVSLETYFQGTPETNLVYVDPKKDPALVRDLIVLREGPDKGRTGIVIGIYPDGSNT--CVVKLDRTR--GIREIRVVPCMWAAKRLGEQ 331          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: A0A7S2IJZ6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJZ6_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.300e-56
Identity = 99/202 (49.01%), Postives = 136/202 (67.33%), Query Frame = 0
Query:   34 DKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGMATTKAIIKLETSSALGMREIKVVPLDYVAKTIEQQ 235
            +K+R  A+++DELQ D+  + WDLV  YP   RS VPVFT YTD+AFP+++P D   RVALRYEVGRFF ++ERL++A   ++  EA TAFA MS+ +DRYL+ G LY  YD+  +TE  +  +S+  L F  P KDPP ++D ++L  GPDKGKTG VIG+   G  T   ++KL+      MREI+VVPL +  K + +Q
Sbjct:  109 NKIRGVARVMDELQRDLMQERWDLVEKYPPQIRSYVPVFTTYTDSAFPSDEPTDQGLRVALRYEVGRFFASLERLRQATSRRSLDEAYTAFADMSLHFDRYLRVGGLYTYYDSTITTEPLFKNISDDALVFSDPKKDPPAVRDLIVLTKGPDKGKTGIVIGIYPDGKGT--CVVKLDRYK--DMREIRVVPLLWAGKRLGEQ 306          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: A0A7S2UB68_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB68_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.260e-55
Identity = 96/202 (47.52%), Postives = 134/202 (66.34%), Query Frame = 0
Query:   34 DKLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGMATTKAIIKLETSSALGMREIKVVPLDYVAKTIEQQ 235
            +K+R   ++LDELQ D+  + WDLV  YPN  RS VPVFT YTD+AFP+++P D   RVALRYEVGRFF ++ER ++A   +   EA  A++ M++ +DRYL  G LY  YD V +TE ++ G+S + L +  P KD P ++D ++L+ GPDKGKTG VIG+   G  T    +KL+ S   GMREIK+VP  +  K + +Q
Sbjct:  137 NKIRSIGQVLDELQRDLMQERWDLVEQYPNQLRSYVPVFTTYTDSAFPSDEPTDKGLRVALRYEVGRFFASLERFRQAVARRALSEAYVAYSDMALHFDRYLHVGGLYTYYDDVVTTEVYFKGISESALVYADPIKDAPDVRDLIVLVKGPDKGKTGIVIGIYPDG--TNNCAVKLDRSK--GMREIKIVPRSWAGKRLGEQ 334          
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Match: A0A7S3L2H9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2H9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.420e-55
Identity = 98/201 (48.76%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   35 KLRRAAKMLDELQEDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGMATTKAIIKLETSSALGMREIKVVPLDYVAKTIEQQ 235
            K+R    ++DELQ D+  + WDLV  YP   RS VPVFT YTD AFP++ P D   RVALRYEVGR F +VER   A+  Q+  EA  A+A M++ +DRYL+ G LY  YD   S E ++ GVS+T L F  P KDPP ++D ++L++GPDKGKTG V+     G  + K ++KL+     GMREI+VVP  +VAK + +Q
Sbjct:   54 KIRTVGNIMDELQRDLMQERWDLVGGYPAQLRSYVPVFTTYTDTAFPSDAPTDKGLRVALRYEVGRLFASVERFNLASSRQSLDEAYLAYADMALHFDRYLRVGGLYSYYDDTISNEPYFKGVSDTALVFADPIKDPPLVRDLIVLVSGPDKGKTGIVLAQYRDG--SNKTVVKLDRFK--GMREIEVVPNAWVAKRLGEQ 250          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1055.759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKJ3_ECTSI6.330e-14082.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y3I2_HETAK7.540e-7858.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GSY0_VITBC1.660e-7253.15Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S3Y3T3_HETAK3.680e-7160.66Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A7R9UEJ4_9STRA4.880e-6760.84Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
B7FPD1_PHATC3.550e-5749.02Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B8BUB6_THAPS4.580e-5748.53Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2IJZ6_9STRA1.300e-5649.01Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2UB68_9STRA2.260e-5547.52Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3L2H9_9STRA2.420e-5548.76Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1055contigS-firma_F_contig1055:439..2812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1055.759.1mRNA_S-firma_F_contig1055.759.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1055 2..4554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1055.759.1 ID=prot_S-firma_F_contig1055.759.1|Name=mRNA_S-firma_F_contig1055.759.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=250bp
MGLAALVAGVAVGAAPANAAAGTAVEVMRLRFGDKLRRAAKMLDELQEDI
ANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTEDPVDTTSRVALRYEVGR
FFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTST
EGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGGM
ATTKAIIKLETSSALGMREIKVVPLDYVAKTIEQQGITNKTSKRMRTVS*
back to top