prot_S-firma_F_contig1054.750.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1054.750.1
Unique Nameprot_S-firma_F_contig1054.750.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length840
Homology
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BLAST of mRNA_S-firma_F_contig1054.750.1 vs. uniprot
Match: D7G4L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L4_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.560e-18
Identity = 161/490 (32.86%), Postives = 202/490 (41.22%), Query Frame = 0 
Query:   13 MVDLSVAPEELAALAEELAKTSSKIERVELALSGRGEYLGITDKDKLLGQLEVLQTKEAQLQKKELLIMGAMAGASAAAPTSAS-SAPLP----LPAGPPSATTPXXXSARTVALPRACVAPPTPTAASAASPSSSPASALSLXXXXXPSTNDAIGVSATTTSGFDGGAANIQAGGSGHPSLNGPDGLPASCAPVNGAAAELGQ-GVDGGAPVASAPANVGVDLAVTEGGGVA---QGAVSQGDVPV-------GYGGGTIAAXXXXXXVGVTAPPAALLTFTHQLLSQVRETKMWTVMLRSSSKFSSNTVGVLNFLTLPRPYQLLNNTITNTGVVTTLPPGTGAGTDPPLPGTAGVLNVLPSQAIPVCGAPVAALSATPVGVVTLAAGPGVGNGAAAGAPAAVGVELL----GQANGNGVPSTAKRRASGEG-------PGSSKGRARVSTQCLHLGCATARTFGRDGDKHASYCAVHRLEGMVNIKGR 475
            M D      EL A+AE+LAKTS+KIE VE+ALSG+G YLGITDKD LL QL+VLQ KEAQLQ KEL IM A+AGASA+A  +AS S   P    LP G   A+T       T                               XXXXX             +SG  G A   Q    GH   +  D   A          + G  GV  GAP  +  A      A  EGGGV    +G ++ G  P        G  GG +        + + +P        HQLL+Q             + + SS T+ V                    G    LPP   A            + V P+Q         ++ +    G     AG G                      G A G G P  + +R +G+G        GS+K RAR S +C + GC TARTFGR GD+ AS+CAVH+ EGM+NIKGR
Sbjct:    1 MADAGTTTAELTAVAEDLAKTSAKIESVEMALSGQGVYLGITDKDTLLSQLDVLQKKEAQLQTKELFIMAAVAGASASAVQAASISVAFPPVGALPTGTAPASTDTSMEELTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAHGGPDNSSGEHGDATTGQ---DGHHVADDSDFGGAEVGGQEVVVPDGGDIGVASGAPSPTVEAGAAQVAATLEGGGVTDVTEGVLNAGVTPAAGYVSGGGGDGGAVGVVHGDVQIALASP--------HQLLAQ-----------SPAPELSSPTLHVNGA----------------PGAAAELPPSLEA------------VGVSPAQHHAAAAGGASSPAEGARGEEYALAGRGAXXXXXXXXXXXXXXXXXXGGQGGAVGCGGPLRSVKRRAGDGGAGISQAAGSNKRRARASARCQYPGCMTARTFGRQGDRQASFCAVHKEEGMINIKGR 440
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BLAST of mRNA_S-firma_F_contig1054.750.1 vs. uniprot
Match: A0A6H5KKE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE2_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 4.160e-8
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:   42 LALSGRGEYLGITDKDKLLGQLEVLQTKEAQLQKKELLIMGAMAGASA 89
            +ALSG+G YLGITDKD LL QL+VLQ KEAQLQ KEL IM A+ GASA
Sbjct:    1 MALSGQGVYLGITDKDTLLSQLDVLQKKEAQLQTKELFIMAAVTGASA 48
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1054.750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4L4_ECTSI1.560e-1832.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKE2_9PHAE4.160e-875.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 631..652
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableCOILSCoilCoilcoord: 23..43
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 63..713

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1054contigS-firma_F_contig1054:5661..11469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1054.750.1mRNA_S-firma_F_contig1054.750.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1054 5242..12450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1054.750.1 ID=prot_S-firma_F_contig1054.750.1|Name=mRNA_S-firma_F_contig1054.750.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=840bp
MEDEGHQQQYYGMVDLSVAPEELAALAEELAKTSSKIERVELALSGRGEY
LGITDKDKLLGQLEVLQTKEAQLQKKELLIMGAMAGASAAAPTSASSAPL
PLPAGPPSATTPAPTSARTVALPRACVAPPTPTAASAASPSSSPASALSL
SSASSPSTNDAIGVSATTTSGFDGGAANIQAGGSGHPSLNGPDGLPASCA
PVNGAAAELGQGVDGGAPVASAPANVGVDLAVTEGGGVAQGAVSQGDVPV
GYGGGTIAAASGGGGVGVTAPPAALLTFTHQLLSQVRETKMWTVMLRSSS
KFSSNTVGVLNFLTLPRPYQLLNNTITNTGVVTTLPPGTGAGTDPPLPGT
AGVLNVLPSQAIPVCGAPVAALSATPVGVVTLAAGPGVGNGAAAGAPAAV
GVELLGQANGNGVPSTAKRRASGEGPGSSKGRARVSTQCLHLGCATARTF
GRDGDKHASYCAVHRLEGMVNIKGRRCNSAGCNHRPGFAMPGEKRGKFCA
THRKPGMVDVVSRKCQAESGDCERQPVYGWPGERATRCGTHKLSRTLTNL
ATGTAVVEMMYDVRGKRCQEKGCLRQPGFGHPVKDKGPVRCHEHKLEGQT
NVRKRRAMERQARQNNPDVNYPPHTHSPAEILHHQQRLKQEQQEKQQQQE
QQQGGQLAPPTSQPSYGNQQQPTGGAGRGGGGGGGQSNLLPIPILPRPSP
HAVASLGNPLASAPLPVAGFVPFQPPPTEASVTVNLPASAAGVVATNAGF
GEEQAAPAPDAEGVSHMIFLMQQQQPQPQPQPQPQPEQQQYNGLQDSTGV
VQPQHQHGVQPGAPPPAAEPAAMTFEVPSTVGTAAPTAV*
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