prot_S-firma_F_contig10529.738.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10529.738.1
Unique Nameprot_S-firma_F_contig10529.738.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length181
Homology
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 7.190e-115
Identity = 161/180 (89.44%), Postives = 174/180 (96.67%), Query Frame = 0
Query:    1 YWIFTSDVYIYDGVKLELHADSGTTGMRLKSDSKIIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 180
            YW+FTSDVYIYDGVKLELHA+SGTTGMRLKSDSK+IELRAHGGWLSLLNTELSSWD DE+DYASN   SAPRSYVTAISEVL++P +TC+GHAKNDAGEARFDIINSEVHHLG+ GTEAYGITWKVRGFCVDLSNEDLF+RVNVRGDIRFSDIHHN+FGMYTYGHQDGLWEYNLMH+NA+
Sbjct:  103 YWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKVIELRAHGGWLSLLNTELSSWDVDEADYASNY--SAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAK 280          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D8LKL1_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL1_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 2.420e-96
Identity = 144/185 (77.84%), Postives = 158/185 (85.41%), Query Frame = 0
Query:    1 YWIFTSDVYIYDGVKLELHADSGTTGMRLKSDSKIIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDI-----INSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 180
            YW+FTSDVYIYDGVKLELHA+SGTTGMRLKSDSK+IELRAHGGWLSLLNTELSSWD DE+DYASN   SAPRSYVTAISEVLETP +TC+GHAKNDAGEARFD            H  +   + Y    +VRGFCVDLSNEDLF+RVNVRG+IRFSDIHHN+FGMYTYGHQDGLWEYNLMH+NA+
Sbjct:   27 YWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKVIELRAHGGWLSLLNTELSSWDVDEADYASNY--SAPRSYVTAISEVLETPPQTCVGHAKNDAGEARFDSDVEPRAAPSAQHTRFFSLQTYA-RQQVRGFCVDLSNEDLFDRVNVRGNIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAK 208          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 3.870e-58
Identity = 95/180 (52.78%), Postives = 130/180 (72.22%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELHADSGTTGMRLKSDS-KIIELRAHGGWLSLLNTELSSWDEDESDYASNSND-SAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 179
            W+ T  +Y+  G  L LH D G T +R+ S S   + L   GG++S+LNT+++SW     +  + + D S PRSY++A+SE+   P +TC G A +DAGEAR DIINS+V +LGY+  E+YG+T+KVRG+C D SN ++F+RVNVRGDIRFSDIHHN+FG Y+YGHQDGLWEYN M ++ 
Sbjct:   97 WLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTH-PSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSG 275          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 7.660e-55
Identity = 94/182 (51.65%), Postives = 126/182 (69.23%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELH---ADSGTTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 179
            W+ T ++Y+ DG+ L++H   A      +RL S S   I LRA+GG L  L+T++ +WD  ++  A + ++S  RSY++A+SEV+    +TC G AKN+ GEAR DI NSE+ +LGY GTE YG+TWKVRGFCVD  N +LF+ VNV G+I  SDIHHN FG+YTYGHQ G W  N MHDN+
Sbjct:   74 WLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKN--APDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNS 253          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 7.150e-54
Identity = 95/182 (52.20%), Postives = 124/182 (68.13%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELHADSG---TTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 179
            W+ T ++++ DG+ L++H  S       +RL S S   I LRAHGG L  L+T++ +WD   +    +  D   RSYV+A+SEV+    +TC G AKN+ GEAR DI +SE+ +LGY G+E+YG+TWKVRGFCVD SN DLFE VNV G+I  SDIHHN FG+YTYGHQ G W  N MHDN+
Sbjct:  100 WLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG--RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNS 279          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D7FMJ0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ0_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 7.650e-52
Identity = 93/183 (50.82%), Postives = 127/183 (69.40%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELHA-DSG--TTGMRLKSD-SKIIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 180
            W+ T ++Y+ DGV L++H  D G     +RL SD +  I LRAHGG  S L T++ SW+E +    +N  D   RSY++A+SEV+  P +TC G AK++ GEAR D+I+SE+  LGY  +E+YG+TWKVRGFC+D SN D+F+ VNV GD+  S+IH N+FG Y+YGHQ G W YN MH+N E
Sbjct:  411 WLLTEELYVTDGVILQVHGTDRGGDCDELRLLSDETTFINLRAHGGSFSFLGTKVVSWNEGKGTVDTNHEDG--RSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCIDKSNLDVFDFVNVYGDMINSNIHDNYFGHYSYGHQGGNWSYNKMHENVE 591          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.230e-51
Identity = 89/183 (48.63%), Postives = 123/183 (67.21%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELHADSG---TTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 180
            W+ T D+Y+ DG+ L++H  S       +RL S SK  I LRAHGG L  ++T++ +WD  ++   ++   S  RSY++A+SE++    E C G AK   GEAR DI +SE+ +LGY+G+E+YG+TWKVRGFC D SN ++F+ VNV G+I  SDIHHN FG+YTYGH+ G W  N MH N E
Sbjct:  103 WLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDG--SKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNRE 283          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 181 bits (459), Expect = 1.620e-51
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELHADSG---TTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 180
            W+ T  +Y+ DG+ L++H  S       +RL S SK  I LRAHGG L  ++T++ +WD  ++     ++DS  RSY++A+SEV+    + C G AK + GEAR DI +SE+ +LGY G+E+YG+TWKVRG C DLSN ++F+ VNV G+I  SDIHHN+FG+YTYGH+ G W  N MH N E
Sbjct:  100 WLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKV--RTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTE 280          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.300e-50
Identity = 88/182 (48.35%), Postives = 125/182 (68.68%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELH---ADSGTTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 179
            W+ T ++Y+ DG+ LE++   A      +RL S ++  I LRAHGG L  ++T++ SWD   S  + + +++  RSY++AISE++    ETC G+AKN  GEAR DI +SE+ +LGY  +E+YG+TWKVRGFC D SN ++F+ VNV G++  SDIHH  FG+YTYGHQ G W  N MHDN+
Sbjct:  103 WLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDT--STNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNS 282          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 3.330e-50
Identity = 88/183 (48.09%), Postives = 125/183 (68.31%), Query Frame = 0
Query:    2 WIFTSDVYIYDGVKLELHADSGTTG----MRLKSDSKI-IELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 179
            W+ T ++Y+ DG+ L+++  +G  G    +RL S +   I LRAHGG L  + T++ SWD   S  + + +++  RSY++AISE++    ETC G+AKN  GEAR DI NSE+ +LG++ +E+YG+TWKVRGFC D SN  +F+ VNV G++  SDIHH  FG+YTYGHQ G W  N MHDN+
Sbjct:  106 WLLTEELYVEDGITLKVYG-TGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDT--STNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNS 285          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9I9_9PHAE7.190e-11589.44MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LKL1_ECTSI2.420e-9677.84Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G1_ECTSI3.870e-5852.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE7.660e-5551.65Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ7_9PHAE7.150e-5452.20Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FMJ0_ECTSI7.650e-5250.82Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE1.230e-5148.63Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A8CEP1_SACJA1.620e-5148.63Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7FXE5_ECTSI1.300e-5048.35Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE3.330e-5048.09MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..180
e-value: 1.7E-39
score: 137.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10529contigS-firma_F_contig10529:1245..4812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10529.738.1mRNA_S-firma_F_contig10529.738.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10529 1245..4812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10529.738.1 ID=prot_S-firma_F_contig10529.738.1|Name=mRNA_S-firma_F_contig10529.738.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=181bp
YWIFTSDVYIYDGVKLELHADSGTTGMRLKSDSKIIELRAHGGWLSLLNT
ELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEA
RFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRF
SDIHHNFFGMYTYGHQDGLWEYNLMHDNAE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold