mRNA_S-firma_F_contig10529.738.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10529.738.1
Unique NamemRNA_S-firma_F_contig10529.738.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 7.190e-115
Identity = 161/180 (89.44%), Postives = 174/180 (96.67%), Query Frame = 1
Query:    1 YWIFTSDVYIYDGVKLELHADSGTTGMRLKSDSKIIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 540
            YW+FTSDVYIYDGVKLELHA+SGTTGMRLKSDSK+IELRAHGGWLSLLNTELSSWD DE+DYASN   SAPRSYVTAISEVL++P +TC+GHAKNDAGEARFDIINSEVHHLG+ GTEAYGITWKVRGFCVDLSNEDLF+RVNVRGDIRFSDIHHN+FGMYTYGHQDGLWEYNLMH+NA+
Sbjct:  103 YWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKVIELRAHGGWLSLLNTELSSWDVDEADYASNY--SAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAK 280          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D8LKL1_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL1_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 2.420e-96
Identity = 144/185 (77.84%), Postives = 158/185 (85.41%), Query Frame = 1
Query:    1 YWIFTSDVYIYDGVKLELHADSGTTGMRLKSDSKIIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDI-----INSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 540
            YW+FTSDVYIYDGVKLELHA+SGTTGMRLKSDSK+IELRAHGGWLSLLNTELSSWD DE+DYASN   SAPRSYVTAISEVLETP +TC+GHAKNDAGEARFD            H  +   + Y    +VRGFCVDLSNEDLF+RVNVRG+IRFSDIHHN+FGMYTYGHQDGLWEYNLMH+NA+
Sbjct:   27 YWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKVIELRAHGGWLSLLNTELSSWDVDEADYASNY--SAPRSYVTAISEVLETPPQTCVGHAKNDAGEARFDSDVEPRAAPSAQHTRFFSLQTYA-RQQVRGFCVDLSNEDLFDRVNVRGNIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAK 208          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 3.870e-58
Identity = 95/180 (52.78%), Postives = 130/180 (72.22%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELHADSGTTGMRLKSDS-KIIELRAHGGWLSLLNTELSSWDEDESDYASNSND-SAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 537
            W+ T  +Y+  G  L LH D G T +R+ S S   + L   GG++S+LNT+++SW     +  + + D S PRSY++A+SE+   P +TC G A +DAGEAR DIINS+V +LGY+  E+YG+T+KVRG+C D SN ++F+RVNVRGDIRFSDIHHN+FG Y+YGHQDGLWEYN M ++ 
Sbjct:   97 WLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTH-PSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSG 275          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 7.660e-55
Identity = 94/182 (51.65%), Postives = 126/182 (69.23%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELH---ADSGTTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 537
            W+ T ++Y+ DG+ L++H   A      +RL S S   I LRA+GG L  L+T++ +WD  ++  A + ++S  RSY++A+SEV+    +TC G AKN+ GEAR DI NSE+ +LGY GTE YG+TWKVRGFCVD  N +LF+ VNV G+I  SDIHHN FG+YTYGHQ G W  N MHDN+
Sbjct:   74 WLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKN--APDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNS 253          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 7.150e-54
Identity = 95/182 (52.20%), Postives = 124/182 (68.13%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELHADSG---TTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 537
            W+ T ++++ DG+ L++H  S       +RL S S   I LRAHGG L  L+T++ +WD   +    +  D   RSYV+A+SEV+    +TC G AKN+ GEAR DI +SE+ +LGY G+E+YG+TWKVRGFCVD SN DLFE VNV G+I  SDIHHN FG+YTYGHQ G W  N MHDN+
Sbjct:  100 WLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG--RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNS 279          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D7FMJ0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ0_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 7.650e-52
Identity = 93/183 (50.82%), Postives = 127/183 (69.40%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELHA-DSG--TTGMRLKSD-SKIIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 540
            W+ T ++Y+ DGV L++H  D G     +RL SD +  I LRAHGG  S L T++ SW+E +    +N  D   RSY++A+SEV+  P +TC G AK++ GEAR D+I+SE+  LGY  +E+YG+TWKVRGFC+D SN D+F+ VNV GD+  S+IH N+FG Y+YGHQ G W YN MH+N E
Sbjct:  411 WLLTEELYVTDGVILQVHGTDRGGDCDELRLLSDETTFINLRAHGGSFSFLGTKVVSWNEGKGTVDTNHEDG--RSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCIDKSNLDVFDFVNVYGDMINSNIHDNYFGHYSYGHQGGNWSYNKMHENVE 591          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.230e-51
Identity = 89/183 (48.63%), Postives = 123/183 (67.21%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELHADSG---TTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 540
            W+ T D+Y+ DG+ L++H  S       +RL S SK  I LRAHGG L  ++T++ +WD  ++   ++   S  RSY++A+SE++    E C G AK   GEAR DI +SE+ +LGY+G+E+YG+TWKVRGFC D SN ++F+ VNV G+I  SDIHHN FG+YTYGH+ G W  N MH N E
Sbjct:  103 WLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDG--SKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNRE 283          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 181 bits (459), Expect = 1.620e-51
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELHADSG---TTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNAE 540
            W+ T  +Y+ DG+ L++H  S       +RL S SK  I LRAHGG L  ++T++ +WD  ++     ++DS  RSY++A+SEV+    + C G AK + GEAR DI +SE+ +LGY G+E+YG+TWKVRG C DLSN ++F+ VNV G+I  SDIHHN+FG+YTYGH+ G W  N MH N E
Sbjct:  100 WLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKV--RTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTE 280          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.300e-50
Identity = 88/182 (48.35%), Postives = 125/182 (68.68%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELH---ADSGTTGMRLKSDSK-IIELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 537
            W+ T ++Y+ DG+ LE++   A      +RL S ++  I LRAHGG L  ++T++ SWD   S  + + +++  RSY++AISE++    ETC G+AKN  GEAR DI +SE+ +LGY  +E+YG+TWKVRGFC D SN ++F+ VNV G++  SDIHH  FG+YTYGHQ G W  N MHDN+
Sbjct:  103 WLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDT--STNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNS 282          
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 3.330e-50
Identity = 88/183 (48.09%), Postives = 125/183 (68.31%), Query Frame = 1
Query:    4 WIFTSDVYIYDGVKLELHADSGTTG----MRLKSDSKI-IELRAHGGWLSLLNTELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEARFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRFSDIHHNFFGMYTYGHQDGLWEYNLMHDNA 537
            W+ T ++Y+ DG+ L+++  +G  G    +RL S +   I LRAHGG L  + T++ SWD   S  + + +++  RSY++AISE++    ETC G+AKN  GEAR DI NSE+ +LG++ +E+YG+TWKVRGFC D SN  +F+ VNV G++  SDIHH  FG+YTYGHQ G W  N MHDN+
Sbjct:  106 WLLTEELYVEDGITLKVYG-TGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDT--STNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNS 285          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10529.738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9I9_9PHAE7.190e-11589.44MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LKL1_ECTSI2.420e-9677.84Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G1_ECTSI3.870e-5852.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE7.660e-5551.65Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ7_9PHAE7.150e-5452.20Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FMJ0_ECTSI7.650e-5250.82Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE1.230e-5148.63Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A8CEP1_SACJA1.620e-5148.63Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7FXE5_ECTSI1.300e-5048.35Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE3.330e-5048.09MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10529contigS-firma_F_contig10529:1245..4812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LC73
PFAMsWSC
Max annot lvl2759|Eukaryota
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Evalue1.28e-38
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Descriptionprotein xylosyltransferase activity
COG categoryU
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionmannuronan C-5 epimerase C-terminal fragment
Ec32 orthologEc-16_003370.1
Exons6
Model size543
Cds size543
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10529.738.1prot_S-firma_F_contig10529.738.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10529 1245..4812 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815588.7903981-CDS-S-firma_F_contig10529:1244..13081622815588.7903981-CDS-S-firma_F_contig10529:1244..1308Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 1245..1308 -
1696949437.1745934-CDS-S-firma_F_contig10529:1244..13081696949437.1745934-CDS-S-firma_F_contig10529:1244..1308Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 1245..1308 -
1622815588.802083-CDS-S-firma_F_contig10529:1596..17001622815588.802083-CDS-S-firma_F_contig10529:1596..1700Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 1597..1700 -
1696949437.19162-CDS-S-firma_F_contig10529:1596..17001696949437.19162-CDS-S-firma_F_contig10529:1596..1700Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 1597..1700 -
1622815588.814104-CDS-S-firma_F_contig10529:2203..22681622815588.814104-CDS-S-firma_F_contig10529:2203..2268Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 2204..2268 -
1696949437.2008166-CDS-S-firma_F_contig10529:2203..22681696949437.2008166-CDS-S-firma_F_contig10529:2203..2268Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 2204..2268 -
1622815588.8252528-CDS-S-firma_F_contig10529:3066..32231622815588.8252528-CDS-S-firma_F_contig10529:3066..3223Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 3067..3223 -
1696949437.2102268-CDS-S-firma_F_contig10529:3066..32231696949437.2102268-CDS-S-firma_F_contig10529:3066..3223Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 3067..3223 -
1622815588.8367288-CDS-S-firma_F_contig10529:3448..35261622815588.8367288-CDS-S-firma_F_contig10529:3448..3526Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 3449..3526 -
1696949437.2190783-CDS-S-firma_F_contig10529:3448..35261696949437.2190783-CDS-S-firma_F_contig10529:3448..3526Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 3449..3526 -
1622815588.8551826-CDS-S-firma_F_contig10529:4737..48121622815588.8551826-CDS-S-firma_F_contig10529:4737..4812Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 4738..4812 -
1696949437.2273285-CDS-S-firma_F_contig10529:4737..48121696949437.2273285-CDS-S-firma_F_contig10529:4737..4812Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10529 4738..4812 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10529.738.1

>prot_S-firma_F_contig10529.738.1 ID=prot_S-firma_F_contig10529.738.1|Name=mRNA_S-firma_F_contig10529.738.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=181bp
YWIFTSDVYIYDGVKLELHADSGTTGMRLKSDSKIIELRAHGGWLSLLNT
ELSSWDEDESDYASNSNDSAPRSYVTAISEVLETPLETCIGHAKNDAGEA
RFDIINSEVHHLGYKGTEAYGITWKVRGFCVDLSNEDLFERVNVRGDIRF
SDIHHNFFGMYTYGHQDGLWEYNLMHDNAE*
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mRNA from alignment at S-firma_F_contig10529:1245..4812-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10529.738.1 ID=mRNA_S-firma_F_contig10529.738.1|Name=mRNA_S-firma_F_contig10529.738.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3568bp|location=Sequence derived from alignment at S-firma_F_contig10529:1245..4812- (Sphaerotrichia firma ET2_F female)
TACTGGATTTTCACCTCCGACGTCTACATCTACGACGGGGTTAAGCTCGA GCTCCACGCCGACTCCGGCACCACGGTGAGTGAATATTGGTGGTGTGATG AATTTGGTCTTGACTTCGGCACCACTGTGAAGTGGCGGTGTGGTGAACTT GCTCTTGATTCCGACACCATGGTGAGTGAAAAGTGGTGGTACGATGACTT TGGTCTTGACTTCGGCACCATTGTAAGTGAAGTGGTGTGATGCATTCGTT CTTGACATTCGGCACCACGGTAAGTGAAGTAGTGGTGTGGTGAATTTGCT CTTGATTCCCACACCACGGTGAGTGAAGTGGTGGTGTGATGAATTTGCTC TTGATTCCGACACCATGGTGAGTGAAAAGTGGTGGTGTGGTGCTCTCGTT CTTGACTCCGACACCATGGTGAGTGAGGTGGTGGTGTGATGAATTTGCTC TTGACTCCGACACCACGGTAAGTGAGGTGGTGGTGTGATGAATCTGCTCT TGACTCCGACACCATGGTGAGTGAAAAGTTGTGGTGTGATGAATTTGCTC TTGATTCCGACACCATGGTGAGTGAAAAGTGGTGGTGTGGTGCTCTCGTT CTTGACTCCGACACCACGGTGAGTGAAGTGAGTGGTGGTGTGATGAATTT GTTATTGACTCGGACACCACAACAAAAAAATGGTGGTGCGGTGCGGTGCG GTGCTCTCGTTCTTCACGCGACGACGAGAGTTGTTAACTCATCATGTCAT GTTATGTGTGGTGTGGCGAAGGTCACCCCGAGACGATGGAGCTGTTTTTT TGTTTTTTTTTATTGTTTTTCTCACTGTGGGTTGAAGGGGAGATCCACAA AATCGGAGACAGAACAGTTAGTCCCCACATTGGAGACGGGACTGACTGCT TGGGCTCCACAACTGGTTTGTTTTGGTGCGGAACGTGTACATTCGCCTGT TTTACTGTTTTTCGATCGGAAAACACGAAAACACCGGTTCGGCGTTTCCG GCTAGGTGCCCTTGCAGGCTCACGCTGACCAAAACCTAACCATACCAGTC GGAAACTCCTTGTACTTTTTTGTTTTTCCTCCCATTGGTGGATTCTGTCG TCTGCCCCACTGGTCCCTACGTGGTGCATGGTGTTTATATACAGTACCTC TCTCATCTCATCTCATCTCATCTCATCTCATCTCATCTCCTCTCATCTCA TCTAATCTTATCTCATCCCATCTCGTCTCATGTCATCTCATCTCATCTCA TCTCATCTCATCTCATCTCGTCTCATCTCGTCTCAGGGTATGCGGCTCAA GTCCGACTCGAAGATCATCGAGCTTAGGGCGCACGGCGGCTGGTTGTCTC TCCTCAACACAGAGGTATGTACTTCGTATGTATGTATGATGTGTACTCTG TATGCACATGCAACTTTTTTTTTTTTTTTTTCCCTCCCATTGTTGGATCT TGCATGGGGATGAGGGATGACCGTGGTTCTCGACCGCCGGGAAATGGCGC TCGCTACAAATGGCACCACCAACGAAAGATCTAGATTACCTAATATTCAT GTGTTTGAGTGCTCGCCTCGCGCCTGACTGCTCCAACAGCTCTCGTCGTG GGACGAAGACGAGTCGGACTACGCGAGCAACTCGAACGACTCGGCGCCGC GCTCGTACGTGACGGCCATCAGCGAGGTCCTGGAGACGCCGCTCGAGACG TGCATCGGCCACGCCAAGAACGACGCCGGAGAGGCTCGGTTCGACAGTGA GTTTTTTTTTTTTCGTTTTGTTGGGTTTTTTGGGGGGGGGGGTTGGTTTT TTCAACATTGGTGCTAAATTCCAAGGAATGTGCTTGTCTTGCTTTGCGGC CTGCTGTTGTAGTGTGGTGTGGTTAATGTTTGGTCGTTGCTTTGGTGAAC GTAGTCGAGCGCTGTCGTGTCTTTAAGTGTCGTTGGCGTAGAGTAGGTGA ACTTGGCTCTCGTGTCCAAGTGTCGTTGGTGTAGAGTGGCTGACAACAGC TCGCGCTTTTTTCACGGCTGGATGGACACAGGCACGATCGTTATTTTGTT TTTGTTACTCCCGTCATTGTATCTCGTCGCCTGCCTTCTCCTCCACTACT CCACGACTGCTGTGCAAACCTATCAACAGGGGTCACGCAAAAGGGGGTCT GTGGGACACCCCCAAGCCCCTGCGGTGCCCCTGCCTCTGATGTTTTTTTG TCGGTTGGAATGTGAAGTGGTGTTCTTAGTGTCATGTCTGGTCCCTTGGT GACCTCACTCGCGCTTTAGTAGCTGCTCCACGGCGCGCTGGCTGATGGGT GTCCGAGGGGAGGCCGGGATTTGTTTTGTGCCCTCCGTGGGGTTGAATTA TGAGCACCCGAAGGAGTGTGGATCAAGCACGATGTCAGACCCCCAGTGCC CCTACTACTGACTGTCTGTGTGGATCATGCACGATGTCAGACCCCCAATG CCCCTATAATACTACTGTCTGTAACCACATGCCTTTTGCCTTAATCCCCT TTCGCTGTCTGCCGTCCATGGTGTGGTTTGGTGTCCTGTTGTAGTCATCA ACAGCGAAGTCCACCACCTGGGGTACAAGGGCACCGAGGCTTACGGCATC ACATGGAAGGTAATCATACCTTCCTACATTCCTAAGTCACTACTTTACTT TGAAGTTTGCTGGTTGTGGAAAAGCACGGTGTTCGCGGATTGAAGATGTG GTGATGCGCTGTTCACGCGTGTGTATGTGTGTAGGTATGAAATGTGTGTA TGTATGTATGATTCGTCGCCTGTTTTGTCTTTCGGGCGATGGTGGGGGCT GCTCTGCTGACACACTGCTGCCATTCACGAGTGGGCCGGTTGATGTCCAG TACCACATCACATGTCCAGTCCAAAGTTGTTCTTGTTTTGTAGCCCCCGC CCCCCTCTCATCTCTCGCTCCCTCTCTCTCTCCCCCCCGTGTGTGACTCA GGCGGTAGTCTACGCCGTTCAATTGTCCCGATTTCCATGCTGTATCCAGT GTTTGCTTCATGTGTTTTTGGTTCTGGGGGTTAGGGTTAGAGTCACGGAG CCCCTATTGTATGTCCCATATAATGTTCATATTTCTTGCGTGCTGTACCC GGTCCGACTCAGGTGCGAGGGTTCTGCGTGGACCTGTCTAACGAGGACTT GTTCGAGCGTGTCAACGTGAGAGGAGACATCCGCTTCTCCGACATCCACC ACAACTTCTTCGGAATGTAAGAAACTTGGAGGCTTGGTTTCCATTTTACG ACTTCTTCGGGATGCAAAATGCATCAAGGCCCGGCATGTATTTTACATTT TACAACCTCTTCGGAATGTAGACACATGAAAGCGAATACTGTTGTAGGTA TCTATTCCGTAGTCAGTCGCCGCAGCAGAGGCGATGTCCACTTCTCCAAC ATCCGCCACAACTTGTTCGGAATGTAAGATGCAAGGTGCACGAAGGCCTG TCTATTTTACAACTTCTTTCGTTTTCTTCTTCTGTATTTTTTTTTTTTTG CCAGGTACACGTACGGCCACCAGGACGGGCTGTGGGAATACAACCTCATG CACGACAACGCCGAGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10529:1245..4812-

>mRNA_S-firma_F_contig10529.738.1 ID=mRNA_S-firma_F_contig10529.738.1|Name=mRNA_S-firma_F_contig10529.738.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1086bp|location=Sequence derived from alignment at S-firma_F_contig10529:1245..4812- (Sphaerotrichia firma ET2_F female)
TACTGGATTTTCACCTCCGACGTCTACATCTACGACGGGGTTAAGCTCGA
GCTCCACGCCGACTCCGGCACCACGTACTGGATTTTCACCTCCGACGTCT
ACATCTACGACGGGGTTAAGCTCGAGCTCCACGCCGACTCCGGCACCACG
GGTATGCGGCTCAAGTCCGACTCGAAGATCATCGAGCTTAGGGCGCACGG
CGGCTGGTTGTCTCTCCTCAACACAGAGGGTATGCGGCTCAAGTCCGACT
CGAAGATCATCGAGCTTAGGGCGCACGGCGGCTGGTTGTCTCTCCTCAAC
ACAGAGCTCTCGTCGTGGGACGAAGACGAGTCGGACTACGCGAGCAACTC
GAACGACTCGGCGCCGCGCTCGTACGTGACGGCCATCAGCGAGGTCCTGG
AGACGCCGCTCGAGACGTGCATCGGCCACGCCAAGAACGACGCCGGAGAG
GCTCGGTTCGACACTCTCGTCGTGGGACGAAGACGAGTCGGACTACGCGA
GCAACTCGAACGACTCGGCGCCGCGCTCGTACGTGACGGCCATCAGCGAG
GTCCTGGAGACGCCGCTCGAGACGTGCATCGGCCACGCCAAGAACGACGC
CGGAGAGGCTCGGTTCGACATCATCAACAGCGAAGTCCACCACCTGGGGT
ACAAGGGCACCGAGGCTTACGGCATCACATGGAAGTCATCAACAGCGAAG
TCCACCACCTGGGGTACAAGGGCACCGAGGCTTACGGCATCACATGGAAG
GTGCGAGGGTTCTGCGTGGACCTGTCTAACGAGGACTTGTTCGAGCGTGT
CAACGTGAGAGGAGACATCCGCTTCTCCGACATCCACCACAACTTCTTCG
GAATGTGCGAGGGTTCTGCGTGGACCTGTCTAACGAGGACTTGTTCGAGC
GTGTCAACGTGAGAGGAGACATCCGCTTCTCCGACATCCACCACAACTTC
TTCGGAATGTACACGTACGGCCACCAGGACGGGCTGTGGGAATACAACCT
CATGCACGACAACGCCGAGTGAGTACACGTACGGCCACCAGGACGGGCTG
TGGGAATACAACCTCATGCACGACAACGCCGAGTGA
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