prot_S-firma_F_contig10519.729.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10519.729.1
Unique Nameprot_S-firma_F_contig10519.729.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length111
Homology
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A6H5JSV6_9PHAE (tRNA_SAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV6_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.390e-24
Identity = 59/105 (56.19%), Postives = 69/105 (65.71%), Query Frame = 0
Query:    9 ETGQDSNGGKAPAPLEGEAVGVGGT-ENKVPSHGGVERRAGAEGI------SGATKYGAETRIVTVAGLSCPCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYSL 106
            E G ++    A +  EG A G  GT   +V      E R G   +      + ATKYGA TRIVTVAGLSCPCGGTHVRSTRE+EGVR+TK KAKKGT+RVSY+L
Sbjct:   22 EHGDEAPSSSASSAQEGPARGAAGTGREEVAVVAEPEGRRGKGNVPASLTAAAATKYGAATRIVTVAGLSCPCGGTHVRSTREMEGVRITKAKAKKGTIRVSYTL 126          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: D7FQB2_ECTSI (Similar to ATP binding / alanine-tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB2_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 5.290e-24
Identity = 64/118 (54.24%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    1 MADMATVVETGQDSNGGKAPAPL-----EGEAVGVGGTENK----VPSHGGVERRAGAEGIS---GATKYGAETRIVTVAGLSCPCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYSL 106
            MA+M T+V+     +G +AP+       EG + G  G   +    V   GG   R      S    ATKYGA TR VTVAGLSCPCGGTHVRSTRE+EGVR+TKVKAKKGTLRVSY+L
Sbjct:  165 MANMETMVKMADQEHGDEAPSSSSSSAQEGPSRGAAGRGREEVTVVAERGGRGGRGKVPASSTAAAATKYGAATRTVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTL 282          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A835Z9X7_9STRA (Alanyl-tRNA editing protein AlaX-M-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.770e-12
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0
Query:   63 RIVTVAGLSCPCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYSL 106
            R+V+V G +CPCGGTHVRST EL G+RVTK KAK G LRVSY++
Sbjct:  179 RVVSVGGCACPCGGTHVRSTAELRGLRVTKAKAKSGRLRVSYTI 222          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A7S1TVS7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS7_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.340e-11
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   63 RIVTVAGL-SCPCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYSLISP 109
            R+VTVAG  +CPCGGTHVRST EL GV VTKVK+KKG ++VSYS+  P
Sbjct:  236 RVVTVAGGGTCPCGGTHVRSTAELGGVTVTKVKSKKGRIKVSYSVTPP 283          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A7S2WSC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSC3_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.390e-9
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   59 GAETRIVTVAGLSCPCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYSL 106
            GA  R+V V G  CPCGGTHV +  ELE V VT++KAKKGT++VSY +
Sbjct:  245 GAMIRVVNVGGCWCPCGGTHVGNASELERVTVTRIKAKKGTVKVSYEV 292          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A4D9CZR6_9STRA (AA_TRNA_LIGASE_II_ALA domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZR6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.320e-9
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   60 AETRIVTVAGLSCPCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYSL 106
            A+ R+V+V G  CPCGGTHV+ST+EL GV +T++K KK   ++SY +
Sbjct:  227 AQVRLVSVGGNICPCGGTHVKSTKELGGVEITRIKTKKNVTKISYRI 273          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A7S1DXT9_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DXT9_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.390e-8
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   57 KYGAET-RIVTVAGLSCPCGGTHVRSTRELEGVR--VTKVKAKKGTLRVSYS 105
            +YG ++ RIVTVAG +CPCGGTHVRST++L+  +  V  +K+KKG +RV Y+
Sbjct:   46 EYGDDSIRIVTVAGWACPCGGTHVRSTKDLKQRQWGVVGIKSKKGVVRVKYA 97          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A7G7HSS4_9MICO (tRNA_SAD domain-containing protein n=1 Tax=Janibacter sp. YB324 TaxID=2761047 RepID=A0A7G7HSS4_9MICO)

HSP 1 Score: 57.8 bits (138), Expect = 1.490e-8
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   50 EGISGATKYGAET-----RIVTVAGLSC-PCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYS 105
            E ++ A  +GAE      R VT+ GL   PCGGTHVR+T +L G+++T+V+ KKG L++SY+
Sbjct:   41 EHVAAALPFGAEVDAEGVRRVTIEGLQTDPCGGTHVRTTADLTGIQITRVRTKKGQLKLSYT 102          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: L8GVN5_ACACA (Threonine/alanine tRNA ligase subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVN5_ACACA)

HSP 1 Score: 59.7 bits (143), Expect = 2.850e-8
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   43 VERRAGAEGISGATKYGAETRIVTV-AGLSCPCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYSLIS 108
            VER  G+   SGA       R+VTV A L CPCGGTHV++T E+  + + K+ AKKG +R+SY+L++
Sbjct:  199 VERLCGSASDSGANPT-EPVRVVTVCAPLGCPCGGTHVQNTGEIGRIAIPKMSAKKGVVRISYTLLA 264          
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Match: A0A1W1YJ62_9MICO (Threonyl and Alanyl tRNA synthetase second additional domain-containing protein n=2 Tax=Janibacter indicus TaxID=857417 RepID=A0A1W1YJ62_9MICO)

HSP 1 Score: 57.0 bits (136), Expect = 6.030e-8
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   50 EGISGATKYGAET-----RIVTVAGLSC-PCGGTHVRSTRELEGVRVTKVKAKKGTLRVSYS 105
            E ++ A  +GAE      R VT+ GL   PCGGTHVR+T +L G+++T+V+ KKG L++SY+
Sbjct:   75 EHVAAALPFGAEVDAEGVRRVTIEGLQTDPCGGTHVRTTADLTGLQITRVRTKKGQLKLSYT 136          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10519.729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSV6_9PHAE1.390e-2456.19tRNA_SAD domain-containing protein n=1 Tax=Ectocar... [more]
D7FQB2_ECTSI5.290e-2454.24Similar to ATP binding / alanine-tRNA ligase n=1 T... [more]
A0A835Z9X7_9STRA1.770e-1270.45Alanyl-tRNA editing protein AlaX-M-like protein n=... [more]
A0A7S1TVS7_9STRA1.340e-1170.83Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WSC3_9STRA1.390e-960.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CZR6_9STRA3.320e-953.19AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
A0A7S1DXT9_9STRA1.390e-855.77Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7G7HSS4_9MICO1.490e-846.77tRNA_SAD domain-containing protein n=1 Tax=Janibac... [more]
L8GVN5_ACACA2.850e-847.76Threonine/alanine tRNA ligase subfamily protein n=... [more]
A0A1W1YJ62_9MICO6.030e-846.77Threonyl and Alanyl tRNA synthetase second additio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 62..103
e-value: 3.5E-5
score: 33.2
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 63..101
e-value: 3.0E-6
score: 27.2
NoneNo IPR availableGENE3D3.30.980.10coord: 33..108
e-value: 2.1E-11
score: 46.1
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 51..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10519contigS-firma_F_contig10519:2445..3022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10519.729.1mRNA_S-firma_F_contig10519.729.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10519 2402..3747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10519.729.1 ID=prot_S-firma_F_contig10519.729.1|Name=mRNA_S-firma_F_contig10519.729.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=111bp
MADMATVVETGQDSNGGKAPAPLEGEAVGVGGTENKVPSHGGVERRAGAE
GISGATKYGAETRIVTVAGLSCPCGGTHVRSTRELEGVRVTKVKAKKGTL
RVSYSLISPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018163Thr/Ala-tRNA-synth_IIc_edit
IPR012947tRNA_SAD