prot_S-firma_F_contig10519.728.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10519.728.1
Unique Nameprot_S-firma_F_contig10519.728.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length198
Homology
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: D7FQB2_ECTSI (Similar to ATP binding / alanine-tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB2_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 2.340e-84
Identity = 130/173 (75.14%), Postives = 145/173 (83.82%), Query Frame = 0
Query:   24 VYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLGSPSWP-EVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVE 195
            +Y+ DTY +  EA +LGVVED++QG+A+ILDRTIFHPQGGGQPSD+GTITCG C   V  VRDV GVIYH+G M G+P    E G P SLALD  KRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRG LP GL KDAFIEK N+ELDKLVMA+M T+V+
Sbjct:    1 MYLQDTYLMTSEATVLGVVEDDSQGSAIILDRTIFHPQGGGQPSDEGTITCGDCTVPVSKVRDVGGVIYHYGTMSGTPQPRLEAGRPASLALDSAKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGTLPAGLEKDAFIEKCNSELDKLVMANMETMVK 173          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A6H5JDI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI3_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.400e-43
Identity = 76/96 (79.17%), Postives = 82/96 (85.42%), Query Frame = 0
Query:  103 WPEVGW---PVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVE 195
            +P + W   PVSLALD  KRLRHA LHSAGHAVDKAV GAVGAGVFSPLKGYHFDDSPYVEYRG LP GL KDAFIEK N+ELDKLV+A+M TVV+
Sbjct:    5 YPPLSWAGRPVSLALDSAKRLRHAVLHSAGHAVDKAVAGAVGAGVFSPLKGYHFDDSPYVEYRGTLPAGLEKDAFIEKCNSELDKLVVANMETVVK 100          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A2D9ITL3_9FLAO (AA_TRNA_LIGASE_II_ALA domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D9ITL3_9FLAO)

HSP 1 Score: 125 bits (313), Expect = 4.040e-32
Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 0
Query:   21 TQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVA-GVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADM 190
            T+ +Y+ DTY    EA    ++ D+  G A++LD+TIF+PQGGGQPSD G I C   +F V  VR    G++ H+G    S  W E G  V L +D  KRL HA +HSAGH +D AV  ++G    SP KG+HF + PYVEY G+L D     ++I  L  ++++LV+ D+
Sbjct:    2 TELIYLQDTYLSTLEARAQELICDDF-GEALVLDKTIFYPQGGGQPSDSGEIVCDTFVFEVSKVRLTNDGLVMHYGEF-SSGGWVE-GLAVELKIDAVKRLVHAKVHSAGHLLDCAV-SSLGLNQLSPTKGFHFPEGPYVEYEGILEDS---SSWIAPLEKKINELVLQDL 165          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A835Z9X7_9STRA (Alanyl-tRNA editing protein AlaX-M-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.280e-31
Identity = 76/180 (42.22%), Postives = 102/180 (56.67%), Query Frame = 0
Query:   20 ATQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITC-GPCIFSVGMVRDVAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVETGQ 198
            +T+R+Y+ DTY     A ++ V +D     AV+LDRT+FHPQGGGQP+D+GT+       F V  V+    VI HFG         + G  V  ++D  +RL+ A LHSAGHA+D AV  A G     P KGYHF+D PYVEY G L     +   ++KLN EL  L+ A + T V   +
Sbjct:    3 STERLYLQDTYSHACSARVVEVRDD-----AVVLDRTVFHPQGGGQPTDRGTLKIHNEVAFVVANVKADGDVILHFGQHGEGDKKLQTGDEVEASIDLQRRLQLARLHSAGHALDAAVRNA-GFAALKPTKGYHFEDGPYVEYEGALSAD-DRATLVDKLNAELALLIEAAIETAVRQSE 175          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A7S1TVS7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.840e-31
Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 0
Query:   21 TQRVYMLDTYKLVDEAVLLGVV------EDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLG----SPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVV 194
            T+R+Y+LDTY    +A  L V       +D+A   AVILDRT+FH QGGGQP+D GTIT    +F V  VR     ++HFG+  G    +P+    G  V L++D  KR+ HA  HSAGHA+D AV    G    +  KGYHF D PYVEY G L   + K+  ++ LN ++ +++  D+ T V
Sbjct:   28 TERLYLLDTYLFEADAAALSVEALEPNPKDDATH-AVILDRTVFHAQGGGQPADLGTITADGAVFEVTGVRSAGDAVHHFGSFRGGDGDAPAAFAAGAAVHLSVDEVKRVAHARCHSAGHALDVAVARIFGEDWVAG-KGYHFLDGPYVEYIGKLAPEM-KETIVDTLNEKIAEVLSEDIPTEV 208          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A2M7QBX6_9BACT (AA_TRNA_LIGASE_II_ALA domain-containing protein n=1 Tax=Candidatus Roizmanbacteria bacterium CG_4_10_14_0_8_um_filter_39_9 TaxID=1974829 RepID=A0A2M7QBX6_9BACT)

HSP 1 Score: 120 bits (300), Expect = 4.250e-30
Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 0
Query:   17 LFPATQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLV 186
            +  AT+ +YM D+YKL D A+ + +++ E   TA+ILD+TIF+PQGGGQP D GTIT    +FSV  VR   G +YH G    +    E G  V+L +DG +R  +   H+AGH +D A+   +G  + +P KGYHF D  YVEY G++ D   K+    K+  E+++L+
Sbjct:    1 MIQATELLYMDDSYKLQDSAIYIDIIQTEGGKTALILDQTIFYPQGGGQPYDLGTITQEGNVFSVEEVRFKDGNVYHIGKF--TQGVIEKGAQVTLHVDGERRKFNRRNHTAGHLIDVAIKN-LGLSL-TPAKGYHFPDGAYVEYIGLM-DEAQKEELKSKIEAEVNRLI 165          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A7S2WSC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSC3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.860e-29
Identity = 74/183 (40.44%), Postives = 106/183 (57.92%), Query Frame = 0
Query:    8 AAPKAQ-PPSLFPATQRVYMLDTYKLVDEAVLLGVVE-DEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRD--VAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLV 186
            A P +Q PP     T ++Y+ DTY+    AV++ V    E+    VILD+T+FHPQGGGQP+D+G ++     F V MV++    G+++HFG+M       E G  V   +D   R   + LHSAGHA+D A+     +G+ +P KGYHF D+PYVEY G L     KD+  E+L  EL  ++
Sbjct:   34 AGPASQDPPPSGLGTNKLYLADTYRTETPAVVVEVEPVPESGDLKVILDKTVFHPQGGGQPADKGVLSFPGGEFRVSMVKEDRSTGLVFHFGSMGSGSGSLEAGTEVDARIDPEWRSVCSRLHSAGHAMDAAMTALAVSGL-TPTKGYHFPDAPYVEYAGTLA-AEEKDSLQERLTNELQSII 214          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A7S2G7E6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G7E6_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 3.910e-29
Identity = 80/196 (40.82%), Postives = 109/196 (55.61%), Query Frame = 0
Query:    7 AAAPKAQPPSLFPATQRVYMLDTYKLVDEAVLLGVVED-EAQGTAVILDRTIFHPQGGGQPSDQGTITC--GPCIFSVGMV-RDVAGVIYHFGAMLGSPSWP--EVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVET 196
            A+   ++P S  P T+ +Y  DTY     A +L +  D +  G +V LDRT FHPQGGGQP+DQGTI+   G   F+V MV +D AGV+ H G     P  P  +VG  V+  +D   R ++A +HSAGH +D A+  A       P KGYHF    YVEY G L +   +DA + KL   +D+L+   + T V T
Sbjct:    6 ASVAASEPASNLPPTEALYQTDTYLFTASATVLAIGPDAKGTGWSVKLDRTCFHPQGGGQPADQGTISACEGGGTFAVSMVSKDKAGVVSHDG-----PEEPSLKVGDSVTCTVDEASRRKNARVHSAGHLIDVAMTNAKCN--LRPTKGYHFTPGSYVEYDGKL-EAAERDALLPKLQASMDELIGQALPTKVLT 193          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A2H0SAS6_9BACT (AA_TRNA_LIGASE_II_ALA domain-containing protein n=1 Tax=Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_19 TaxID=1974784 RepID=A0A2H0SAS6_9BACT)

HSP 1 Score: 115 bits (288), Expect = 2.130e-28
Identity = 70/171 (40.94%), Postives = 102/171 (59.65%), Query Frame = 0
Query:   21 TQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVR-DVAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADM 190
            T+ +Y+ DTY    EA +  +   E +G A+ILD+TIF+PQGGGQP+D G IT    +F+V  VR D  GV+YHFG        P  G  V+L +D  +R+ +A LHSAGH + +AV      G+  P+KG+HF + PYVEY G L +      +I ++   +++LV  D+
Sbjct:    2 TKLIYLEDTYLFESEAEVKEIKNTE-KGLAIILDQTIFYPQGGGQPTDHGKITTENVVFNVADVRLDEDGVVYHFGNFQNGTIKP--GEKVTLKVDKERRINNAKLHSAGHLIAEAVKKLEIPGI-KPVKGFHFPEGPYVEYEGTLEN---PQEYIPEIEKTVNELVEEDI 165          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: V4LWR5_EUTSA (AA_TRNA_LIGASE_II_ALA domain-containing protein n=4 Tax=Brassicaceae TaxID=3700 RepID=V4LWR5_EUTSA)

HSP 1 Score: 115 bits (289), Expect = 2.410e-28
Identity = 72/175 (41.14%), Postives = 100/175 (57.14%), Query Frame = 0
Query:   18 FPATQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTI--TCGPCIFSVGMVRDVAGVIYHFGAMLGSPSWP----EVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLV 186
            FP T+ VY +D + L  +A  L + + +   TA+ILD T+FHPQGGGQPSD G I  T     FSV  VR   G++ H+G   GS        E G  V L +D  +R  ++ LHSAGH +D  +   VG G   P KGYHF D P+VEY+G+LP  + +    ++L  E ++L+
Sbjct:    3 FPPTKLVYHVDMFNLQSQARFLSLFKAQDGRTALILDSTVFHPQGGGQPSDTGFIVFTGSDSKFSVQDVRSKDGIVLHYGVFEGSNPESGMNIEEGQEVHLIVDESRRKLNSRLHSAGHLLDLCMQ-KVGLGHLEPGKGYHFPDGPFVEYKGILPQDVLQ-VKQKELEAEANELI 175          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB2_ECTSI2.340e-8475.14Similar to ATP binding / alanine-tRNA ligase n=1 T... [more]
A0A6H5JDI3_9PHAE2.400e-4379.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D9ITL3_9FLAO4.040e-3243.27AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
A0A835Z9X7_9STRA2.280e-3142.22Alanyl-tRNA editing protein AlaX-M-like protein n=... [more]
A0A7S1TVS7_9STRA4.840e-3142.39Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A2M7QBX6_9BACT4.250e-3041.76AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
A0A7S2WSC3_9STRA2.860e-2940.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G7E6_9EUKA3.910e-2940.82Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A2H0SAS6_9BACT2.130e-2840.94AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
V4LWR5_EUTSA2.410e-2841.14AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 45..99
e-value: 4.1E-9
score: 35.5
NoneNo IPR availableGENE3D2.40.30.130coord: 13..101
e-value: 8.9E-16
score: 59.7
NoneNo IPR availablePANTHERPTHR43462:SF2THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEINcoord: 19..194
NoneNo IPR availablePANTHERPTHR43462FAMILY NOT NAMEDcoord: 19..194
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 115..194
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 19..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10519contigS-firma_F_contig10519:420..2480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10519.728.1mRNA_S-firma_F_contig10519.728.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10519 389..2480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10519.728.1 ID=prot_S-firma_F_contig10519.728.1|Name=mRNA_S-firma_F_contig10519.728.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=198bp
MQEPQKAAAPKAQPPSLFPATQRVYMLDTYKLVDEAVLLGVVEDEAQGTA
VILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLGS
PSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKG
YHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVETGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf
IPR018163Thr/Ala-tRNA-synth_IIc_edit
IPR018164Ala-tRNA-synth_IIc_N