prot_S-firma_F_contig10515.722.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10515.722.1
Unique Nameprot_S-firma_F_contig10515.722.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length147
Homology
BLAST of mRNA_S-firma_F_contig10515.722.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 4.220e-54
Identity = 95/127 (74.80%), Postives = 108/127 (85.04%), Query Frame = 0
Query:    2 PPASSAHKYKIDVKERVVRADFSGSITSRIDPLDEAYVLRLFERPDVTVIIKGLAAGLDPDLWNTRFLAERCGEMMYHSFRRFVLPNGNSSGPFSPIPEREKAWSSMRLRDFVRYLDKRANALRSRA 128
            PPA++AHKY+ID+K R+VRADFS S  +RIDPLDEAYVL LFERPDVTV+I GLA GLDP LWNTR+L ERCGEMMYHSFRRF  P G   GPF PIP RE+AWSSMRLRD+VRYL+K A+A R+RA
Sbjct:   15 PPAATAHKYRIDMKNRLVRADFSKS-GARIDPLDEAYVLGLFERPDVTVVINGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPVREEAWSSMRLRDYVRYLNKLADAKRARA 140          
BLAST of mRNA_S-firma_F_contig10515.722.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.740e-18
Identity = 50/123 (40.65%), Postives = 67/123 (54.47%), Query Frame = 0
Query:    1 SPPASSAHKYKIDVKERVVRADFSGSITSRIDPLDEAYVLRLFERPDVTVIIKGLAAGLDPDLWNTRFLAERCGEMMYHSFRRFVLPNGNSSGPFSPIPEREKAWSSMRLRDFVRYLDKRANA 123
            SPP      Y  D   RVVR D SG  T  + P DEAY+ +L +RPD+TVII+GL+ GL P LW+  +L  RC ++M H  R F   + +S+         E  W SM +  +  YL+ RA A
Sbjct:  448 SPPQRGTAAYSFDELNRVVRCDVSG--TPVVHPDDEAYICQLLDRPDLTVIIRGLSDGLSPHLWSIPYLRSRCRDLMVHKLRCFRRRSPSSTESL------ETEWRSMPVHSYCNYLEARAAA 562          
BLAST of mRNA_S-firma_F_contig10515.722.1 vs. uniprot
Match: A0A7S2B8L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B8L6_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.000e-17
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 0
Query:   12 IDVKERVVRADFSGSITSRIDPLDEAYVLRLFERPDVTVIIKGLAAGLDPDLWNTRFLAERCGEMMYHSFRRFVLPNGNSSGPFSPIPEREKAWSSMRLRDFVRYLDKRANALR 125
            +D   RVVR D +G     +DP D+ Y+ RL ++PDVT+I+KGL  GL P LW+  +L  RCG++M H  R F    G+ +       E E  W SMRL D++ YL+ R  A R
Sbjct:    2 VDPVNRVVRMDMAGKPC--LDPDDDDYLHRLLDQPDVTLIVKGLGDGLTPHLWSEPYLKSRCGDLMLHKLRCF---RGSRNKCAQDSVETE--WKSMRLNDYMGYLEARQKAHR 108          
BLAST of mRNA_S-firma_F_contig10515.722.1 vs. uniprot
Match: A0A7S3ZG35_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZG35_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 1.210e-9
Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   50 VIIKGLAAGLDPDLWNTRFLAERCGEMMYHSFRRFVL-PNGNSSGPFSPIPEREKAWSSMRLRDFVRYLDKRANAL 124
            VIIKGL   L  +LWNT +L ++ G MMYH FRR+ L  + ++ G F    E EK W SM + D+ RYLD R   L
Sbjct:   18 VIIKGLGRRLSHELWNTPYLFQKLGPMMYHRFRRYCLVDSSHTQGGFEKRYE-EKDWLSMTIGDYQRYLDAREKML 92          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10515.722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCL4_ECTSI4.220e-5474.80ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2SQY1_9STRA6.740e-1840.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2B8L6_9STRA2.000e-1742.11Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3ZG35_9EUKA1.210e-947.37Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10515contigS-firma_F_contig10515:306..3178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10515.722.1mRNA_S-firma_F_contig10515.722.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10515 306..3180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10515.722.1 ID=prot_S-firma_F_contig10515.722.1|Name=mRNA_S-firma_F_contig10515.722.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=147bp
SPPASSAHKYKIDVKERVVRADFSGSITSRIDPLDEAYVLRLFERPDVTV
IIKGLAAGLDPDLWNTRFLAERCGEMMYHSFRRFVLPNGNSSGPFSPIPE
REKAWSSMRLRDFVRYLDKRANALRSRAAGAGATATTGNTSAAAAAA
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