prot_S-firma_F_contig10513.720.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10513.720.1
Unique Nameprot_S-firma_F_contig10513.720.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length77
Homology
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A0A5A8CF49_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CF49_CAFRO)

HSP 1 Score: 75.1 bits (183), Expect = 7.400e-16
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 MSAPLSRFSSHWRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQ 61
            MS   SRFSS WR +G+NYLEMITV+S ++R+ +KEP+RTEAL ++++A+R   F  GVEQ
Sbjct:   33 MSGAPSRFSSFWRRSGLNYLEMITVASTSMRQCLKEPLRTEALGRTSYAFREFKFENGVEQ 93          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A0A5A8DPQ8_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DPQ8_CAFRO)

HSP 1 Score: 75.1 bits (183), Expect = 8.000e-16
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 MSAPLSRFSSHWRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQ 61
            MS   SRFSS WR +G+NYLEMITV+S ++R+ +KEP+RTEAL ++++A+R   F  GVEQ
Sbjct:   36 MSGAPSRFSSFWRRSGLNYLEMITVASTSMRQCLKEPLRTEALGRTSYAFREFKFENGVEQ 96          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A9PDH8_POPTR (Uncharacterized protein n=6 Tax=Saliceae TaxID=238069 RepID=A9PDH8_POPTR)

HSP 1 Score: 51.2 bits (121), Expect = 7.480e-7
Identity = 22/61 (36.07%), Postives = 35/61 (57.38%), Query Frame = 0
Query:   12 WRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQEAVMLDQGGVQ 72
            WR AGM Y+    + +N +R  +KEP +TEALS+    + +T F +G  Q+ V+    G +
Sbjct:   10 WRAAGMTYITYSNICANLVRNCLKEPYKTEALSREKVHFAVTKFVDGNPQKPVVRSDSGTE 70          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A0A5N5LM92_9ROSI (Uncharacterized protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5LM92_9ROSI)

HSP 1 Score: 51.2 bits (121), Expect = 3.140e-6
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0
Query:   12 WRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQEAVMLDQG 69
            WR AGM Y+    + +N +R  +KEP +TEALS+    + +T FA+G  Q+  +L  G
Sbjct:   10 WRAAGMTYITYSNICANLVRNCLKEPYKTEALSREKVQFAVTKFADGNPQKPKILYHG 67          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A0A8B8KM02_ABRPR (ATP synthase subunit epsilon, mitochondrial n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KM02_ABRPR)

HSP 1 Score: 48.1 bits (113), Expect = 1.300e-5
Identity = 20/51 (39.22%), Postives = 33/51 (64.71%), Query Frame = 0
Query:   12 WRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQE 62
            WR AGM Y+   T+ +N +R  +KEP++TEALS+    + L+ + +G  Q+
Sbjct:   13 WRAAGMTYVTYSTICANLVRNCLKEPLKTEALSREKVYFSLSKWVDGKPQK 63          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: M1VEK3_CYAM1 (Mitochondrial F-type ATPase F1 subunit epsilon n=2 Tax=cellular organisms TaxID=131567 RepID=M1VEK3_CYAM1)

HSP 1 Score: 48.1 bits (113), Expect = 1.630e-5
Identity = 21/57 (36.84%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   11 HWRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQEAVMLD 67
            +WR+AG++YL+   V +  +RRV+KEP RT+ALS++ ++     + +G     V L+
Sbjct:    4 YWRVAGLSYLQYANVCAEYVRRVLKEPERTKALSRAGYSMIKATWKDGKVASRVTLE 60          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: M2XSR0_GALSU (F-type H+-transporting ATPase subunit epsilon n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSR0_GALSU)

HSP 1 Score: 47.4 bits (111), Expect = 2.620e-5
Identity = 19/47 (40.43%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   12 WRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEG 58
            WR AG+ YL    + ++ +R+ +KEP RTEALS++ F    ++++EG
Sbjct:    5 WRAAGLTYLRYANICADFVRKALKEPKRTEALSRTTFEMTKSEWSEG 51          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A0A6J1JZ99_CUCMA (ATP synthase subunit epsilon, mitochondrial n=6 Tax=fabids TaxID=91835 RepID=A0A6J1JZ99_CUCMA)

HSP 1 Score: 47.0 bits (110), Expect = 3.460e-5
Identity = 18/54 (33.33%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   12 WRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQEAVM 65
            WR AGM Y+    + +N +R  +KEP++TE LS+    + ++ +A+G  Q+ ++
Sbjct:   10 WRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPII 63          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A0A6N2LCX9_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LCX9_SALVM)

HSP 1 Score: 47.8 bits (112), Expect = 4.130e-5
Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 0
Query:   12 WRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQE 62
            WR AGM Y+    + +N +R  +KEP +TEALS+    + +T F +G  Q+
Sbjct:   10 WRAAGMTYITYSNICANLVRNCLKEPFKTEALSREKVHFSVTKFVDGNPQK 60          
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Match: A0A3N7FC01_POPTR (Uncharacterized protein n=1 Tax=Populus trichocarpa TaxID=3694 RepID=A0A3N7FC01_POPTR)

HSP 1 Score: 47.4 bits (111), Expect = 4.320e-5
Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 0
Query:   12 WRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAYRLTDFAEGVEQE 62
            WR AGM Y+    + +N +R  +KEP +TEALS+    + +T F +G  Q+
Sbjct:   10 WRAAGMTYITYSNICANLVRNCLKEPYKTEALSREKVHFAVTKFVDGNPQK 60          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10513.720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A5A8CF49_CAFRO7.400e-1657.38Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DPQ8_CAFRO8.000e-1657.38Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A9PDH8_POPTR7.480e-736.07Uncharacterized protein n=6 Tax=Saliceae TaxID=238... [more]
A0A5N5LM92_9ROSI3.140e-639.66Uncharacterized protein n=1 Tax=Salix brachista Ta... [more]
A0A8B8KM02_ABRPR1.300e-539.22ATP synthase subunit epsilon, mitochondrial n=1 Ta... [more]
M1VEK3_CYAM11.630e-536.84Mitochondrial F-type ATPase F1 subunit epsilon n=2... [more]
M2XSR0_GALSU2.620e-540.43F-type H+-transporting ATPase subunit epsilon n=1 ... [more]
A0A6J1JZ99_CUCMA3.460e-533.33ATP synthase subunit epsilon, mitochondrial n=6 Ta... [more]
A0A6N2LCX9_SALVM4.130e-539.22Uncharacterized protein n=1 Tax=Salix viminalis Ta... [more]
A0A3N7FC01_POPTR4.320e-539.22Uncharacterized protein n=1 Tax=Populus trichocarp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036742ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialGENE3D1.10.1620.20coord: 10..67
e-value: 1.2E-8
score: 36.6
IPR036742ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialSUPERFAMILY48690Epsilon subunit of mitochondrial F1F0-ATP synthasecoord: 11..54
IPR006721ATP synthase, F1 complex, epsilon subunit, mitochondrialPFAMPF04627ATP-synt_Epscoord: 11..58
e-value: 2.9E-11
score: 43.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10513contigS-firma_F_contig10513:414..713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10513.720.1mRNA_S-firma_F_contig10513.720.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10513 378..733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10513.720.1 ID=prot_S-firma_F_contig10513.720.1|Name=mRNA_S-firma_F_contig10513.720.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=77bp
MSAPLSRFSSHWRIAGMNYLEMITVSSNALRRVMKEPMRTEALSKSAFAY
RLTDFAEGVEQEAVMLDQGGVQRLEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006721ATP_synth_F1_esu_mt
IPR036742ATP_synth_F1_esu_sf_mt