prot_S-firma_F_contig10510.715.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10510.715.1
Unique Nameprot_S-firma_F_contig10510.715.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length221
Homology
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 5.980e-132
Identity = 209/221 (94.57%), Postives = 212/221 (95.93%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRRQAVFASATGRSPVVSTASERYMREEPLFVGGEE-AAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            IV+ATPGRLCE+VFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATP GRRQAVFASATGRSPVVS ASERYMREEPLFVGG +   G GQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFP SVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRI MVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR
Sbjct:  958 IVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPRGRRQAVFASATGRSPVVSAASERYMREEPLFVGGGDLGVGSGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPESVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIAMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 1178          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 286 bits (732), Expect = 1.640e-85
Identity = 140/220 (63.64%), Postives = 175/220 (79.55%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGR-RQAVFASATGRSPVVSTASERYMREEPLFVGGEEAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAG 219
            +++ TPGR+CE+  +++R+KL  V+ VVLDEVD L+RPPYD+EID I+        RQ V+ASATGRSP V  A+ ++M+E   +V G + AG      GLP NI+HTI+T PKV+KF++LRRL++TQPFP SVM+FVNDP QV WLTE+LETVGIIAAPLSGES K++R EIM+RL D R+ MVVTTEMAARG+DV  LTHVVNYDLPTDA+HYVHRAG
Sbjct:  662 VLIGTPGRVCELALEKKRVKLANVKFVVLDEVDTLMRPPYDEEIDQIIGTMRSSEYRQTVYASATGRSPTVERAAAKHMKEGYTYVVGNDNAGAD----GLPPNIKHTIITSPKVRKFESLRRLMHTQPFPESVMVFVNDPHQVRWLTEKLETVGIIAAPLSGESVKEERTEIMKRLTDGRLAMVVTTEMAARGIDVPQLTHVVNYDLPTDAEHYVHRAG 877          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: A0A7S2XV29_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV29_9STRA)

HSP 1 Score: 211 bits (537), Expect = 5.890e-62
Identity = 110/220 (50.00%), Postives = 148/220 (67.27%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRRQAVFASATGRSPVVSTASERYMREEPLFVGGEEAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            +VV TPGRL ++V +  R+++G     VLDEVD LL   +  E+D +M      ++Q VFASATGRS  V  A   +M  + +FVGG     G +R   LP N+ HT ++     + D +RRL++ +P P  +++F ND  +V  L E+L  +GI+AAPLSGESSKDDR E +RRLQ  +I ++V+TE+AARGLDV  LTHVVNYDLPTDA+HYVHRAGR
Sbjct:  272 VVVGTPGRLADLVIEYGRLRVGHATVAVLDEVDMLLESQFRGEVDHLMQKF-NSQKQVVFASATGRSEAVEAAMADFM-VDGVFVGG--TGSGSERAQALPPNVAHTFISCRPDLRLDNIRRLISVEPAPEGILVFTNDQHKVQILLEKLLDLGIVAAPLSGESSKDDRKEAVRRLQKGQISVLVSTELAARGLDVPQLTHVVNYDLPTDAEHYVHRAGR 487          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: A0A0G4F225_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F225_VITBC)

HSP 1 Score: 198 bits (504), Expect = 1.480e-55
Identity = 107/226 (47.35%), Postives = 148/226 (65.49%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGG----RRQAVFASATGRSPVVSTASERYMRE--EPLFVGGEEAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            +VV TPGRL + V DRR++ L  V+ +VLDEVD L+R PY+ +++++M   P G     RQ +FASATG    V+ A++RYMR     +  GG + +  G     +P NI H  + + + K  + LR+ L+T P    V+ F N   +V WL + L    IIAAPLSG +SKDDRAE+ +R+Q+ +IGM V+TE+ ARGLDV  L+HVVN DLPTDA+HY+HRAGR
Sbjct:  508 VVVGTPGRLYDFVLDRRKVDLSRVKYLVLDEVDQLIRDPYEGQLESLMATIPKGTHSTHRQTIFASATGAQKSVTQAAKRYMRPVWHVIRPGGVKHSDEGVPL--IPPNIHHIFMCVREDKVTEALRKFLHTDPVDKRVLCFCNKQGRVKWLVDHLLQKQIIAAPLSGFTSKDDRAEVFKRMQNGQIGMAVSTELGARGLDVPWLSHVVNLDLPTDAEHYIHRAGR 731          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: A0A7S2RGS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGS7_9STRA)

HSP 1 Score: 186 bits (472), Expect = 6.990e-51
Identity = 106/223 (47.53%), Postives = 141/223 (63.23%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRRQAVFASATGRSPVVSTA-SERYMREEPL-FVGGE-EAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            +++ TPGR+ ++ F  +++KLG +  VVLDE DA+L  P+  ++  I+      R Q V ASAT  S     A +  + R  P+ FVGG  E +   +    +P  + H +V M + K F  LR LLNT+P P + MIFVN+  +V  L ++L  VGIIAAPL GESSK+DR EIMRRL   R+G+VVTTE+AARG+D   LTHVVN DLP DA  Y HRAGR
Sbjct:  590 VLIGTPGRVADIAFVHQKLKLGSISAVVLDEADAMLDDPHAADVKKILTEVKK-RTQLVVASATSGSAATREALTHTFGRGRPMDFVGGATEDSMVTKANIVMPPTVMHAVVQMEQRKMFSALRSLLNTEPHPEAAMIFVNEAHRVKVLCDKLLDVGIIAAPLHGESSKEDRTEIMRRLASGRLGLVVTTELAARGIDAPILTHVVNLDLPPDATRYAHRAGR 811          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: A0A4D9D1Y7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Y7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.470e-49
Identity = 103/240 (42.92%), Postives = 141/240 (58.75%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRRQAVFASATGRSPVVSTASERYMR----------------EEPLFVGGEEAAGGGQRRGG----LPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            ++V TPGR+ EMV ++R+ ++G    +VLDEVD LL   Y  ++  ++ A  G  RQAVFASATG SP V   +   M+                  PL    EE AG           LP+++RH I+  P VK  D LRR LNT+P P  V++FVND ++V  + E L+  GI AA LSG+S+K  RA  + RL   R+ + VTTE+AARG+D+  L+HV+N DLP+  + YVHRAGR
Sbjct:  185 VLVGTPGRVAEMVLEKRKARIGRAEMLVLDEVDMLLDDSYHGDLRMLVQAM-GSLRQAVFASATGASPGVEALASNVMQGPYQIISSSSSPSSPSSTPLLDPQEEDAGDQASSLPPSIELPASLRHGILITPPVKAVDNLRRFLNTEPKPECVLVFVNDALKVPRIVEALQAKGIDAAGLSGDSNKQTRANTLARLTSGRLRVCVTTEIAARGIDIPALSHVINLDLPSSLEQYVHRAGR 423          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: L1JBQ8_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBQ8_GUITC)

HSP 1 Score: 166 bits (421), Expect = 2.920e-46
Identity = 92/224 (41.07%), Postives = 144/224 (64.29%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDR-RRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRRQAVFASATGRSPVVSTASERYMREEPLFVGGEEAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIG---MVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            I+V TPGR+ E+      +++L  V+ +++DEVD  L+     +++ I+ A     RQ +FASATG    V + ++   R+EPL +   + AG    R  LP  +RH ++  P+VKK   ++++ N     T +++FVND  +V+ + ++L   G+IAAPL G+ SK+DR E+MRRL++  +G   +VV TE+AARG+D+  L+HVV+ DLPTDA+HYVHRAGR
Sbjct:  127 ILVGTPGRIVELASKMGAKIRLQGVKYLIVDEVDQCLKKAMQSDLNLILQACSSPARQTIFASATGNVNNVKSLAQSSFRKEPLLL---DLAG---LR--LPPQLRHCVIVTPRVKKIALVKKIFNLNGM-TGLLVFVNDQRRVDIICDKLFENGLIAAPLKGDESKEDRKEVMRRLREGTLGEVPLVVATEIAARGIDIPGLSHVVSLDLPTDANHYVHRAGR 341          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: UPI001E1DCBBA (LOW QUALITY PROTEIN: ATP-dependent RNA helicase DeaD-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCBBA)

HSP 1 Score: 162 bits (411), Expect = 1.910e-42
Identity = 91/222 (40.99%), Postives = 136/222 (61.26%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRRQAVFASATGRSPVVSTASERYMREEPL--FVGGEEAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            +V+ TPGRL E+    R ++L   R VV+DEVD  L   +   ++A++ + PG R Q VF SATG   +V   ++++MRE  L  F+G ++          +PSNI H    +P   + D +R+L+ T+  P S + FV+DP +V+ + ERL  + + A  L G + K +RAE++R  +   I ++VTTE+AARGLDV  ++HV N DLPTDADHY+HR GR
Sbjct:  337 VVIGTPGRLAEL-SQNRVLRLRKTRMVVVDEVDQCLEDAFRVHLEAVLSSCPGDR-QLVFCSATGDKDIVRRYAQKWMREPALLRFLGKQK----------VPSNISHWSTVVPARLRIDIIRKLIYTKDPPISAICFVDDPRRVDIVCERLYAMKVPAGALRGNAHKLERAEVIRLFRKGAIRLLVTTEVAARGLDVPAVSHVFNLDLPTDADHYIHRXGR 546          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: A0A7S4BCL2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCL2_CHRCT)

HSP 1 Score: 155 bits (392), Expect = 1.350e-40
Identity = 87/224 (38.84%), Postives = 137/224 (61.16%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRR-QAVFASATGRSPVVSTASERYMREEPLFVGGE--EAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERL-ETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGR 220
            +++ T GR+CE+ F+ +++KL  VR +VLDEVD  LR P+ +    +++     RR Q +FASAT  +P+V  ++ + M E PL +  +   A  GG    GLP ++ H +  +P  K+ +TL R     P P + ++FVN P +   + + L E+ G+ AA L G+  +++R  +MR     ++ ++++TEM ARGLD+  LTHVVN +LPTD  HYVHRAGR
Sbjct:  251 LLIGTAGRVCELNFEAKKLKLQRVRHLVLDEVDEALRTPHLEPTTRLIELMQDRRRLQLIFASATADTPMVQRSALQLM-ESPLLLQLQLDGATSGGV---GLPPHLVHALCAVPAPKQLETLGRFARISPAPKA-LVFVNSPHRAQVVAQMLVESYGVRAASLHGKQEREERVAVMRAFHSGKLPLIISTEMGARGLDIPGLTHVVNLELPTDERHYVHRAGR 469          
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Match: UPI001AFE8DD3 (DEAD/DEAH box helicase n=1 Tax=bacterium TaxID=1869227 RepID=UPI001AFE8DD3)

HSP 1 Score: 147 bits (372), Expect = 4.040e-39
Identity = 91/219 (41.55%), Postives = 133/219 (60.73%), Query Frame = 0
Query:    1 IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGGRRQAVFASATGRSPVVSTASERYMREEPLFVGGEEAAGGGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAG 219
            +VV TPGRL E++ D + +K    R +VLDEVD LL P +  ++  ++ +     RQ +FASAT  +P V   +ER+M+E P  V  E +         LP N++HT + + +  K D LR+L++    P + M+FVN   Q   + E+L   G+ AA L G + K DR  I++  ++ +I ++VT+EM ARGLD +HLTHV N DLPTDA HY+HRAG
Sbjct:  123 LVVGTPGRLAELINDGK-LKTQATRLLVLDEVDHLLDPTFKTDLIRVLKSV-SRDRQTLFASAT-ITPDVQEVAERWMKE-PTHVHVEASYK-------LPPNLQHTYMEV-EGHKSDALRKLIHASQ-PKAAMVFVNSSKQTEEIAEKLSFKGLKAAALHGGARKQDRGAILKAFREGQIQVLVTSEMGARGLDFSHLTHVFNLDLPTDAAHYLHRAG 328          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10510.715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4S8_ECTSI5.980e-13294.57DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835Z5P1_9STRA1.640e-8563.64Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2XV29_9STRA5.890e-6250.00Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A0G4F225_VITBC1.480e-5547.35Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S2RGS7_9STRA6.990e-5147.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D1Y7_9STRA1.470e-4942.92Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
L1JBQ8_GUITC2.920e-4641.07Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
UPI001E1DCBBA1.910e-4240.99LOW QUALITY PROTEIN: ATP-dependent RNA helicase De... [more]
A0A7S4BCL2_CHRCT1.350e-4038.84Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
UPI001AFE8DD34.040e-3941.55DEAD/DEAH box helicase n=1 Tax=bacterium TaxID=186... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 144..220
e-value: 5.1E-16
score: 69.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 116..220
e-value: 3.5E-18
score: 66.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 119..220
score: 13.457
NoneNo IPR availableGENE3D3.40.50.300coord: 93..220
e-value: 4.4E-30
score: 106.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..90
e-value: 9.2E-15
score: 56.6
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..220
NoneNo IPR availablePANTHERPTHR24031:SF650coord: 1..220
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 1..66
e-value: 1.1E-9
score: 38.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..83
score: 9.497
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10510contigS-firma_F_contig10510:202..3749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10510.715.1mRNA_S-firma_F_contig10510.715.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10510 202..3749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10510.715.1 ID=prot_S-firma_F_contig10510.715.1|Name=mRNA_S-firma_F_contig10510.715.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=221bp
IVVATPGRLCEMVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDA
TPGGRRQAVFASATGRSPVVSTASERYMREEPLFVGGEEAAGGGQRRGGL
PSNIRHTIVTMPKVKKFDTLRRLLNTQPFPTSVMIFVNDPIQVNWLTERL
ETVGIIAAPLSGESSKDDRAEIMRRLQDKRIGMVVTTEMAARGLDVAHLT
HVVNYDLPTDADHYVHRAGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C