prot_S-firma_F_contig10502.709.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_F_contig10502.709.1
Unique Name	prot_S-firma_F_contig10502.709.1
Type	polypeptide
Organism	Sphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length	78

Homology

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BLAST of mRNA_S-firma_F_contig10502.709.1 vs. uniprot
Match: D7G2K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K4_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 5.090e-32
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0

Query:    1 MVELQGELVSKDPMSGQPLGSMTSENGKPMLVIANHKLEGKPASEPKPLLVLRKVVVDVNDEN 63
            MVELQGEL+SKDP+SGQPLGSMTSENGK MLVI+NHKLEGK ASEPKPLLVLRKVVVDVNDEN
Sbjct:    1 MVELQGELISKDPLSGQPLGSMTSENGKAMLVISNHKLEGKAASEPKPLLVLRKVVVDVNDEN 63

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BLAST of mRNA_S-firma_F_contig10502.709.1 vs. uniprot
Match: A0A0F7SUC4_PHARH (Chromosome transmission fidelity protein 8 n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SUC4_PHARH)

HSP 1 Score: 52.0 bits (123), Expect = 4.320e-6
Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    1 MVELQGELVSKDPMSGQPLGSMTSENGKPMLVIANHKLEGKPASEPKPLLVLRKVVVDVNDENSSSI 67
            ++ELQG + +     GQ +G +  E G+P L I++H L G   + PKPL VLRK  + ++DE    I
Sbjct:   36 LIELQGAIETDGDTDGQLIGKLGLEAGRPTLTISHHLLHGTFVNLPKPLAVLRKAPIIIDDEELEGI 102

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_F_contig10502.709.1 vs. uniprot

BLAST of mRNA_S-firma_F_contig10502.709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G2K4_ECTSI	5.090e-32	92.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A0F7SUC4_PHARH	4.320e-6	38.81	Chromosome transmission fidelity protein 8 n=1 Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR28605	FAMILY NOT NAMED	coord: 1..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_F_contig10502	contig	S-firma_F_contig10502:3..1956 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_F_contig10502.709.1	mRNA_S-firma_F_contig10502.709.1	Sphaerotrichia firma ET2_F female	mRNA	S-firma_F_contig10502 3..1956 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_F_contig10502.709.1 ID=prot_S-firma_F_contig10502.709.1|Name=mRNA_S-firma_F_contig10502.709.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=78bp
MVELQGELVSKDPMSGQPLGSMTSENGKPMLVIANHKLEGKPASEPKPLL
VLRKVVVDVNDENSSSINGDSSNDGDGG