prot_S-firma_F_contig10499.692.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10499.692.1
Unique Nameprot_S-firma_F_contig10499.692.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length142
Homology
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Match: A0A6H5JXR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR4_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.290e-72
Identity = 121/155 (78.06%), Postives = 127/155 (81.94%), Query Frame = 0
Query:    1 GVIHYYPYDGEKETRPAARLDEEDDESITIEAFWEGRLVPESHAAALSFFPPSKLNKKERETLGSSWRRRIKGMLFVDWNFPISNNKLKLQFPEGDLNTALNAKYVLPKPPA-------------EFREWLIKCHETLDIEYRFDDKMPTPQNSK 142
            GVIHYYPYDGEKETRP  R DEEDDESITIEAFWEGRLVPESHAA L FFP  K NKKERE LG+SWRRRIKGMLF DWNFPISNNKLKLQF EGDL+TALNA Y+ PK PA             EFREWLIKCHETLD+EYRFDDKMP+P +SK
Sbjct:  450 GVIHYYPYDGEKETRPQVRPDEEDDESITIEAFWEGRLVPESHAAWLPFFPSHKPNKKEREALGTSWRRRIKGMLFFDWNFPISNNKLKLQFLEGDLHTALNANYLPPKHPAVIYPGVRGRNIQKEFREWLIKCHETLDVEYRFDDKMPSPASSK 604          
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Match: D8LFL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFL9_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.570e-20
Identity = 46/54 (85.19%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 GVIHYYPYDGEKETRPAARLDEEDDESITIEAFWEGRLVPESHAAALSFFPPSK 54
            GVIHYYPYDGE ETRP  R DEEDDESITIEAFWEGRLVPESHAA L FFP  K
Sbjct:  483 GVIHYYPYDGENETRPQVRPDEEDDESITIEAFWEGRLVPESHAAWLPFFPSHK 536          
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Match: A0A059LHT2_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LHT2_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 1.370e-8
Identity = 37/116 (31.90%), Postives = 58/116 (50.00%), Query Frame = 0
Query:   30 IEAFWEGRLVPESHAAALSFFPPSKLNKKE--RETLGSSWRRRIKGMLFVDWNFPISNNKLKLQFPEGDLNTALNAKYVLPKPPA-EFREWLIKCHETLDIEYRFDDKMPTPQNSK 142
             E +WEGRL+P +   +L F   ++  KKE   +        R++G LFVD +F ++ NKL    P   L   L+    + +  A +F+EWL +CH TLD  + F   +     +K
Sbjct:  418 FEVYWEGRLIPAAVVESLDFIDRARPKKKELKNDAPPEEAFMRLRGTLFVDASFKVTKNKLMFAQP---LAALLSGSQGVSRSLARDFKEWLARCHRTLDRSWCFSGPLDARHQAK 530          
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Match: A0A6A5BHS3_NAEFO (SMC hinge domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BHS3_NAEFO)

HSP 1 Score: 60.5 bits (145), Expect = 7.080e-8
Identity = 43/147 (29.25%), Postives = 66/147 (44.90%), Query Frame = 0
Query:    1 GVIHYYPYDGEKETRPAAR-----------LDEE---DDESITIEAFWEGRLVPESHAAALSFFPPSKLNKKERETLGSSWRRRIKGMLFVDWNFPISNNKLKLQFPEGDLNTALNAKYVLPKPPAEFREWLIKCHETLDIEYRFDD 133
            G+I+YYP+   +ET P               D+E    + +   E FW GRL+       L +    + N+     +  +  RR+KGMLF D+ F +S NK+ L          LN  Y        +R+W+ +CH+ LD E  FD+
Sbjct:  657 GIIYYYPFKQGRETLPIPEELYLEGGKYVPTDQEVPLSERNPGFECFWNGRLLANEKIKNLPWMEKERSNRD----IPDNCYRRVKGMLFFDYAFEVSANKMYLCKQTPLCQALLN--YTDRTLMQRYRKWIKECHKKLDEEIIFDE 797          
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Match: A0A2P6V3P3_9CHLO (Structural maintenance of chromosomes flexible hinge domain-containing 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3P3_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 1.140e-6
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 0
Query:   30 IEAFWEGRLVPESHAAALSFFPP--SKLNKKERETLGSSWRRRIKGMLFVDWNFPISNNKLKLQFPEGDLNTALNAKYVLPKPPAEFREWLIKCHETLDIEYRFD 132
             EAFW+GRL+P +    L F      K N + ++ +     RR++G LF    F ++ NKL   F +        A     +  A+F++WL +CH TLD   RF+
Sbjct:  542 FEAFWQGRLIPGARIDTLPFVESVRQKRNAQAKDVIPDEAFRRLRGALFFGPAFRVTRNKLL--FRDNLAEVLAGAVPGERQMEAKFKQWLQRCHSTLDKSVRFE 644          
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Match: A0A2P6TW64_CHLSO (Structural maintenance of chromosomes flexible hinge domain-containing 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TW64_CHLSO)

HSP 1 Score: 54.7 bits (130), Expect = 7.220e-6
Identity = 33/105 (31.43%), Postives = 51/105 (48.57%), Query Frame = 0
Query:   30 IEAFWEGRLVPESHAAALSFFPP--SKLNKKERETLGSSWRRRIKGMLFVDWNFPISNNKLKLQFPEGDLNTALNAKYVLPKPPAEFREWLIKCHETLDIEYRFD 132
             EAFW+GRL+P +    L F      K   + ++ +     RR++G LF    F ++ NKL   F +        A     +  A+F++WL +CH TLD   RF+
Sbjct:  514 FEAFWQGRLIPGARIDTLPFVEAVRQKRTAQAKDVIPDEAFRRLRGALFFGPAFRVTRNKLL--FRDNLAEVLAGAVPGERQMEAKFKQWLQRCHSTLDKSVRFE 616          
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Match: E1Z3V7_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3V7_CHLVA)

HSP 1 Score: 53.9 bits (128), Expect = 1.330e-5
Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 0
Query:   20 LDEEDDE-------SITI-EAFWEGRLVPESHAAALSFFPPSKLNKKERETLGSSWRRRIKGMLFVDWNFPISNNKLKLQ--FPEGDLNTALNAKYVLPKPPAEFREWLIKCHETLDIEYRFD 132
            LDE  DE       S+ I EAFW+GRL+P +    L F         E + +     RR++G LF    F ++ NKL  +   PE  L TA+  +  +    A+ R+WL +CH TLD   RF+
Sbjct:  494 LDEXXDEEAQGGWQSVPIFEAFWQGRLIPGARIDTLPFL--------EADMIPDEAFRRLRGALFFGPAFRVTRNKLLFRDSLPEV-LATAVPGERQME---AKLRQWLQRCHSTLDKSVRFE 604          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10499.692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JXR4_9PHAE1.290e-7278.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFL9_ECTSI2.570e-2085.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A059LHT2_9CHLO1.370e-831.90Uncharacterized protein (Fragment) n=1 Tax=Helicos... [more]
A0A6A5BHS3_NAEFO7.080e-829.25SMC hinge domain-containing protein n=1 Tax=Naegle... [more]
A0A2P6V3P3_9CHLO1.140e-632.38Structural maintenance of chromosomes flexible hin... [more]
A0A2P6TW64_CHLSO7.220e-631.43Structural maintenance of chromosomes flexible hin... [more]
E1Z3V7_CHLVA1.330e-534.96Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038892Structural maintenance of chromosomes flexible hinge domain-containing protein 1PANTHERPTHR22640UNCHARACTERIZEDcoord: 1..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10499contigS-firma_F_contig10499:1193..3196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10499.692.1mRNA_S-firma_F_contig10499.692.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10499 1193..3196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10499.692.1 ID=prot_S-firma_F_contig10499.692.1|Name=mRNA_S-firma_F_contig10499.692.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=142bp
GVIHYYPYDGEKETRPAARLDEEDDESITIEAFWEGRLVPESHAAALSFF
PPSKLNKKERETLGSSWRRRIKGMLFVDWNFPISNNKLKLQFPEGDLNTA
LNAKYVLPKPPAEFREWLIKCHETLDIEYRFDDKMPTPQNSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038892SMCHD1