prot_S-firma_F_contig1049.688.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1049.688.1
Unique Nameprot_S-firma_F_contig1049.688.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length262
Homology
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 2.050e-70
Identity = 138/296 (46.62%), Postives = 156/296 (52.70%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIAEDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPT-----------------CAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVVGEEPT-----------------CAAGIPGILKDDVCCPTSCGACGGSHCNGRNGGDDFTGREACCQSGVTTLGRICS 262
            C  GI GI   DVCC  SCG+CGG+GCSGR+GG       ACC GGV   GR CS T   PC+     MC  GI GI   DVCC  SCG+C G+GC+GR+GG       ACC GGV   GR CS T  APC+    PT                 C  GI GI  +DVCC  SCG+CGG GC+ R+GG       ACC  GV   GR CS T  APC+ G  PT                 C  GI GI   DVCC TSCG+CGG+ C+GR+GG       ACC  GV   GR CS
Sbjct:   46 CDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGG-----SGACCGGGVRASGRYCSVTGEAPCMTVP--MCDGGIVGIQASDVCCSASCGSCAGTGCSGRDGGSG-----ACCGGGVQASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSG-----ACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSG-----ACCGGGVRASGRYCS 319          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 7.400e-70
Identity = 142/313 (45.37%), Postives = 161/313 (51.44%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIA-----------------EDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPT-----------------CAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVVGEEPT-----------------CAAGIPGILKDDVCCPTSCGACGGSHCNGRNGGDDFTGREACCQSGVTTLGRICS 262
            C  GI GI + DVCC  SCG+CGGSGCS R+GG      E+CC GGV   GR CS T   PC+ +                 E  MC  GI GI   DVCC  SCG+CGGSGC GR+GG      E+CC GGV   GR CS T  APC+    PT                 C  GI GI  +DVCC  SCG+CGG GC GR+GG      E+CC  GV   GR CS T  APC+ G  PT                 C  GI GI   DVCC  SCG+CGGS C+GR+GG      E+CC  GV   GR CS
Sbjct:   77 CDGGIVGIQSSDVCCSASCGSCGGSGCSSRDGG-----SESCCGGGVRASGRYCSVTGEAPCMTSPAPTXXXXXXXXXXXXXEIPMCDGGIVGIQTSDVCCSASCGSCGGSGCTGRDGGS-----ESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCTGRDGGS-----ESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCSGRDGGS-----ESCCGGGVRGSGRYCS 369          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 2.920e-67
Identity = 135/296 (45.61%), Postives = 153/296 (51.69%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIAEDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPT-----------------CAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVVGEEPT-----------------CAAGIPGILKDDVCCPTSCGACGGSHCNGRNGGDDFTGREACCQSGVTTLGRICS 262
            C   I GI + DVCC  SCG+CGGSGC+GR+GG      E+CC GGV   GR CS T   PC+     MC   I GI + DVCC  SCG+CGGSGC  R+GG      E+CC GGV   GR CS T  APC+    PT                 C   I GI  +DVCC  SCG+CGG GC  R+GG      E+CC  GV   GR CS T  APC+ G  PT                 C   I GI   DVCC  SCG CGGS C GR+GG      E+CC  GV   GR CS
Sbjct:    2 CDGDIVGIQSSDVCCSASCGSCGGSGCTGRDGG-----SESCCGGGVRASGRYCSITGEAPCMTVP--MCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGS-----ESCCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGS-----ESCCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGTCGGSGCTGRDGGS-----ESCCGGGVRASGRYCS 275          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.700e-64
Identity = 134/320 (41.88%), Postives = 157/320 (49.06%), Query Frame = 0
Query:    5 IPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVC----------SATV---GTPCVIAEDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPT--------------------------------CAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVVGEEPT-----------------CAAGIPGILKDDVCCPTSCGACGGSHCNGRNGGDDFTGREACCQSGVTTLGRICS 262
            I GI N DVCCP SCG CG  GCS   GG       +CC   V   G  C          S+T     TP   +E  MC  GI GI   +VCC  SCG+CGG GC+GR+GG D     ACC GGVT  GR+CS T  APC+    PT                                C  GI GI   +VCC  SCG+CGG+GC+GR+GG D     ACC  GVT  GR+C+ T  APC+ G  PT                 C  GI GI   +VCC  SCG+CGG  C+GR+GG D     ACC  GVT  GR+C+
Sbjct:   66 ISGIQNKDVCCPVSCGMCGDEGCSTAPGG-----AASCCTTNVLDAGIECGEAPCVIDASSSTTPAPATPAPTSEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSD-----ACCGGGVTASGRLCSVTGEAPCITGPAPTPAPSPPXTVEGPAPTLEPXXXXXXPPAGEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSD-----ACCGGGVTASGRLCAVTGEAPCITGPAPTPEXXXXXXXXXTVEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSD-----ACCGGGVTASGRLCA 365          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: D7G5D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D5_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.290e-56
Identity = 106/219 (48.40%), Postives = 123/219 (56.16%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIA-----------------EDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPTCAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVV 202
            C  GI GI   D+ C +SCG+CGG+GC+ R+GG      EACC GGV   GR CS T   PC+                   E  MC  GI GI   D+CC +SCG+CGG+GC  R+GG      EACC GGV   GR CS T  APC+  E P C  GI GI ++DVCC  SCG+CGG GC  R+GG      EACC  GV   GR CS T  APCVV
Sbjct:   64 CDGGIVGIQQSDISCSSSCGSCGGTGCTSRDGG-----SEACCGGGVRASGRYCSVTGEAPCMTGPAPTPEXXXXXXXXXTDEVSMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGS-----EACCGGGVRASGRYCSVTGEAPCMTNEVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGS-----EACCGGGVRASGRDCSVTGEAPCVV 267          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: D7G3T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T6_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 2.110e-54
Identity = 106/219 (48.40%), Postives = 123/219 (56.16%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIA-----------------EDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPTCAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVV 202
            C  GI GI   D+CC +SCG+CGG+GC+ R+GG      EACC GGV   GR CS T   PC+                   E  MC  GI GI   D+CC + CG+CGG+GC  R+GG      EACC GGV   GR CS T  APC+  E P C  GI GI ++DVCC  SCG+CGG GC  R+GG      EACC  GV   GR CS T  APCVV
Sbjct:   25 CDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGG-----SEACCGGGVRASGRFCSVTGEAPCMTGPAPTPXXXXXXXXXXTDEVPMCDGGIVGIQQSDICCSSRCGSCGGTGCTSRDGGS-----EACCGGGVRASGRYCSVTGEAPCMTNEVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGS-----EACCGGGVRASGRDCSVTGEAPCVV 228          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: A0A6H5JVC9_9PHAE (AMOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC9_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 3.130e-51
Identity = 115/245 (46.94%), Postives = 132/245 (53.88%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIAE---------------DQ----MCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPT-----------------CAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVV--GEEPT 207
            C  GI GI + DVCC  SCG+CGG+GC+GR+GG D     ACC GGV + GR CS T   PC+                  D+    MC  GI GI + DVCC +SCG+CGGSGC GR+GG+D     ACC GGV   GR CS T  APC+    PT                 C  GI GI  +DVCC  SCG+CGG GC  R+GG D     ACC  GV   GR CS T  APCVV  G  PT
Sbjct:   53 CDGGIVGIQSSDVCCSLSCGSCGGTGCTGRDGGAD-----ACCGGGVRSSGRFCSVTGEAPCITGPAPTPEPTXXXXXXXXDEGAVPMCDGGIVGIQSSDVCCTSSCGSCGGSGCTGRDGGED-----ACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTEEVPMCDGGIVGIQSSDVCCSLSCGSCGGTGCTVRDGGAD-----ACCGGGVRASGRDCSVTGEAPCVVTSGVPPT 282          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: A0A6H5K3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y1_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 2.030e-49
Identity = 107/236 (45.34%), Postives = 120/236 (50.85%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIA-----------------EDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPT-----------------CAAGIPGILKNDVCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVV 202
            C  GI GI   DVCC  SCG+CGGSGCSGR+GG D     ACC GGV   GR CS T   PC+                   E  MC   I GI   DVCC  SCG+CGGSGC+GR+GG D     ACC GGV   GR CS T  APC+    PT                 C  GI GI  +DVCC  SCG+     C GR+GG D     ACC  GV   G +CS T  APC++
Sbjct:  180 CEGGIAGIQASDVCCSVSCGSCGGSGCSGRDGGSD-----ACCGGGVRASGRFCSITEEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGEIVGIQASDVCCSASCGSCGGSGCSGRDGGSD-----ACCGGGVRASGRFCSVTGEAPCMTGPAPTTEPTXXXXXXXTVEVPMCDGGIVGIQASDVCCSASCGSXXXXXCTGRDGGPD-----ACCGGGVRASGLLCSVTGEAPCLL 400          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: H6WBB4_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB4_VAULI)

HSP 1 Score: 115 bits (287), Expect = 3.270e-26
Identity = 95/277 (34.30%), Postives = 124/277 (44.77%), Query Frame = 0
Query:   14 CCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIAEDQMCAAGIPGI-------LNDDV---CCPTSCGACGGSGCNGRNGGDDFTGREACCVGGVTTLGRVCSATVGAPCVVA-----------EEPTCAAGIPGILKNDV----CCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPCVVGEE------PTCAAGIP-GILKDDV---CCPTSCGACGGSHCNGRNGGDDFTGREACCQSGVT 255
            CCP+SCG CGG GC  R GGD      +CC   + T    CS   G PC IA+  M    +P +       ++D     CCP++CG CGG+GC+ R GGD       CC G VT     CS     PC+++            +P  +   P     D     CCP +CGACGG GC+ R GG        CC   +T   + CS +   PC+  ++      P  +   P G + D     CCP  CG CGG  C+ R GG       +CC   VT
Sbjct:   40 CCPSSCGTCGGEGCYMRPGGD-----MSCCTSKIETP---CSKGSGPPCKIADYNMPPPPMPPMDKCPKESISDSTGKYCCPSTCGQCGGAGCDKRPGGD-----VKCCTGKVTNS---CS-MAKPPCMISGGHTPPTPPPTNKPPASGKCPHESIPDSSGMKCCPATCGACGGFGCDKRPGG-----AMMCCTGNIT---KSCSMSAP-PCIASDDKPYPPMPPSSGKCPDGSIPDASGMKCCPMKCGTCGGLGCDMRPGG-----AASCCTGSVT 285          
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Match: A0A6H5JVK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK3_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 3.920e-19
Identity = 54/118 (45.76%), Postives = 59/118 (50.00%), Query Frame = 0
Query:    1 CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTLGRVCSATVGTPCVIA-----------------EDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRNG 101
            C  GI GI   DVCC  SCG+CGGSGCSGR+GG D     ACC GGV   GR CS T   PC+                   E  MC  GI GI   DVCC  SCG+       GR+G
Sbjct:    2 CDGGIVGIQASDVCCSASCGSCGGSGCSGRDGGSD-----ACCGGGVRASGRFCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQASDVCCSASCGSXXXXXXXGRDG 114          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1049.688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3U7_ECTSI2.050e-7046.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4E0_ECTSI7.400e-7045.37N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5JTV1_9PHAE2.920e-6745.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWJ0_9PHAE1.700e-6441.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5D5_ECTSI1.290e-5648.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3T6_ECTSI2.110e-5448.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVC9_9PHAE3.130e-5146.94AMOP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K3Y1_9PHAE2.030e-4945.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H6WBB4_VAULI3.270e-2634.30Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A6H5JVK3_9PHAE3.920e-1945.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1049contigS-firma_F_contig1049:20794..24703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1049.688.1mRNA_S-firma_F_contig1049.688.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1049 20792..24703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1049.688.1 ID=prot_S-firma_F_contig1049.688.1|Name=mRNA_S-firma_F_contig1049.688.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=262bp
CAAGIPGILNDDVCCPTSCGACGGSGCSGRNGGDDFTGKEACCVGGVTTL
GRVCSATVGTPCVIAEDQMCAAGIPGILNDDVCCPTSCGACGGSGCNGRN
GGDDFTGREACCVGGVTTLGRVCSATVGAPCVVAEEPTCAAGIPGILKND
VCCPTSCGACGGIGCNGRNGGDDFTGREACCQSGVTTLGRICSATVGAPC
VVGEEPTCAAGIPGILKDDVCCPTSCGACGGSHCNGRNGGDDFTGREACC
QSGVTTLGRICS
back to top