prot_S-firma_F_contig104.579.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig104.579.1
Unique Nameprot_S-firma_F_contig104.579.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length623
Homology
BLAST of mRNA_S-firma_F_contig104.579.1 vs. uniprot
Match: D8LHM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM5_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 5.050e-61
Identity = 251/716 (35.06%), Postives = 322/716 (44.97%), Query Frame = 0
Query:    7 PNTNMQYFGLVGGELAVMSKVDPLGPRPASPDLWR--------------QH------------------------ADGAGGTVHAGGGLRSTPQNNSSPGTSRVGSRNGTRNRRGELFTAEEPLVPKPVDGPEPPAWLESRFGLLRESSEGGGPSAASLASVGACHGGSTTALEWTSLGVRV-----IDSESCSPTGSSGGGVMSDGDDES-----------SAFALSVTSVPSAVSDDEASEGA-------------EAMNFMPIKGARHRQAAKVMRATPKPALRKKARYRRRKRGRLQARSGXXXGEATVVPTAQPSSK--SVVAPVPEWSQREPERDAAQNPI----DNINSGNVVRKPEPEVYDVWIPQRVFQGKGLPTLKRMMGGAEPQPQRSPRSRATQAAAEDKVEGDTPTANPPNQGV-------DSPSSRDYHQLAPRQQQRKQVQATDKRCAVHHVSGPNEF--------ETDNAVPPPQAS--VRAEYPGDGTTPARPADSERPVVFFAGVTHDTKNNETEAKAKHRSGDGDDASYWSDDSRG-------GRSVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEYIDFAKRFSWRTAAEVVTQAEXXXXXXXXXXXXXXXXARGDERQDRGVTADGADEQLQQEARQQTSAXXXXXXXXL--RARERSDNAALVAVGRLRAPQSVFNPLHRTPSRPEMRR 623
            P    +YFGLVGGEL VMSKVDPLGPRP+SP  WR              +H                        AD A   V  G G R+T   ++   T   GS++ +R+RRGE+FTA+EP V KPV+GP+PP W ES+ GLL E SEG   +A SLAS+GA HGGS+TA      G  V      ++  CS T ++  G  +    ES           SAFALS  S P AVSDDE SE               E M      GA++ +A +  R        K+ R  R ++ R++ R G   G   V   A+ +SK  S++      ++R  E    ++PI     N N      KP+PE+YDVWI +  F GKGLPT KR+ G +EP+P +  ++    AAA D+   D PT  P +Q         + PS  + H   P         +  KRCAV +V GP +F        ET   V     S  V  ++          A          GV  +T   + +      +GDG   +       G       GR                                  +EY D+AKRFSW+TAAEVV +AE XXXX             G+ R D     D                XXXXXXXX   RAR RSD+AA VAVGRLRAPQSVF+ +HRTPSRPEMRR
Sbjct:   63 PEYTTKYFGLVGGELGVMSKVDPLGPRPSSPGFWRATEAAVPSEATLERRHQRQARAKXXXXXXXXXXXXXXXXXADPASDAV--GVGARATWPGDAGSPTRPPGSKDSSRHRRGEVFTAQEPPVTKPVEGPDPPPWSESKLGLLCEPSEGASTTA-SLASIGAEHGGSSTATSPEDWGNAVDMVPETNNSCCSVTTNTSRGGRTGPSFESKXXXXXXXXXXSAFALSFVSAPWAVSDDEGSEQGPQARQTRCRLRANEIMLPSTAAGAKNTEAVQAARRLAALQGAKRGRRGRARQTRMRVRGGG--GHCIVESPAKLNSKVVSILQEDGGENRRGREVGITRSPIAIDSSNDNVSTSPFKPQPELYDVWIARDFFHGKGLPTGKRVRGESEPRPPKGLKA----AAAADRGSVDIPTITPASQAAKRASEDREPPSHPEQHHTRPA----AAAASAGKRCAVRYVGGPEDFTGGTASGAETREGVRAGARSPQVAGKWRAGACLRLEAARVPGATAAVTGVGLETTRVDNDRIEPSLNGDGGGDAXXXXXXXGHGNGPVLGREAEEIVDVSGDIVAWQAEEDEEEVDGREGMEDEDEEYFDYAKRFSWQTAAEVVKEAEAXXXXRSREQRRPELRT-GEVRDDMQHDTDDXXXXXXXXXXXXXXXXXXXXXXXXSERARVRSDHAAAVAVGRLRAPQSVFHRMHRTPSRPEMRR 764          
BLAST of mRNA_S-firma_F_contig104.579.1 vs. uniprot
Match: A0A6H5KCJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ2_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 1.380e-52
Identity = 266/724 (36.74%), Postives = 326/724 (45.03%), Query Frame = 0
Query:    7 PNTNMQYFGLVGGELAVMSKVDPLGPRPASPDLWR--------------QH------------------------ADGAGGTVHAGGGLRSTPQNNSSPGTSRVGSRNGTRNRRGELFTAEEPLVPKPVDGPEPPAWLESRFGLLRESSEGGGPSAASLASVGACHGGSTTALEWTSLGVRV-----IDSESCSPT--GSSGGGV---------MSDGDDESSAFALSVTSVPSAVSDDEASEGAEAMNFMPIKGARHRQAAKVMRAT----PKPALRKKARYRRRKRGRLQARSGXXXGEA---------------------TVVPTAQPSSKSVVAPVPE---WSQREPERDAAQNPI----DNINSGNVVRKPEPEVYDVWIPQRVFQGKGLPTLKRMMGGAEPQPQRSPRSRATQAAAEDKVEGDTPTANPPNQGVDSPSSRDYHQLAPRQQQRKQVQAT----DKRCAVHHVSGPNEFETDNAV-PPPQASVRA-----EYPGDGTTPAR--PADSERPVVFFAGVTH------DTKNNETEAKAKHRSGDGDDASYWSDDSRGGRSVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE---YIDFAKRFSWRTAAEVVTQAEXXXXXXXXXXXXXXXXARGDERQDRGVTADGADEQLQQEARQQTSAXXXXXXXXLRARERSDNAALVAVGRLRAPQSVFNPLHRTPSRPEMRR 623
            P    +YFGLVGGEL VMSK+DPLGPRP+SPD WR              +H                        AD A   V  G G R+ P       T   GS++ +R+RRGE+FTA+EP V KPV+GP+PP W ES+ GLL E SEG   +AASLAS+GA HGGS+ A      G  V      ++  CS T   SSGG                   SAFALS    P AVSDDE  E          +G R RQ    +RA     P PA   K     +   RL A  G   G                        +V +    +  VV+ + +    + R  E    ++PI     N N    + KP+PE+YDVWI +  F  KGLPT KR+ G +EP+P +  ++    AAA  +   + PT  P  Q     +S D      R+Q  K+  AT     KRCAV +V GP +F    A     +  VRA     +  G   T AR  P ++ R     A VT          N+  E      SG GD +    DD  G   VL                               DE   Y D+AKRFSW+TAAEVV +A XXXXXXXXXXXXXXXX                              XXXXXXXX  AR RSD+AA VAVGRLRAPQSVF+ +HRTPSRPEMRR
Sbjct:   75 PEYTTKYFGLVGGELGVMSKMDPLGPRPSSPDYWRATEAAVPSEATLELRHQRQARAKRRGSKTXXXXXXXXVTAADSASDAV--GVGARAPPX------TRLPGSKDSSRHRRGEVFTAQEPPVTKPVEGPDPPPWSESKLGLLCEPSEGAS-AAASLASIGAEHGGSSAATSPEDWGFVVDMVPETNNSCCSATINTSSGGRAGPIFEXXXXXXXXXXXXSAFALSFVRAPWAVSDDEGGE----------QGPRARQPRCRLRANEIVLPSPAAGAKNTEAVQVARRLAALQGAKRGRRGRAXXXXXXXXXXXXXXXXXNCIVESHGKLNSKVVSILQQDGGENCRGREVGITRSPIAIDSSNDNVSTALFKPQPELYDVWIARDFFHSKGLPTGKRVRGESEPRPPKGLKA----AAAAGRGSVNIPTITPAFQAAKR-ASEDREPPGHREQHHKRPAATAASVGKRCAVRYVGGPEDFTGRTASGAASREDVRAGARSPQVAGKCRTGARLRPPEAARVPGATAAVTGVRLEIGRVDNDRIEPGFNGDSG-GDASDTDDDDGHGSGPVLGREAEEIVDISGDIVAWQAEEEEVDGREGMEDEDEEYFDYAKRFSWKTAAEVVKEAXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVRSDHAAAVAVGRLRAPQSVFHRMHRTPSRPEMRR 767          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig104.579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHM5_ECTSI5.050e-6135.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCJ2_9PHAE1.380e-5236.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig104contigS-firma_F_contig104:48537..50623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig104.579.1mRNA_S-firma_F_contig104.579.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig104 48532..50623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig104.579.1 ID=prot_S-firma_F_contig104.579.1|Name=mRNA_S-firma_F_contig104.579.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=623bp
MVCHLYPNTNMQYFGLVGGELAVMSKVDPLGPRPASPDLWRQHADGAGGT
VHAGGGLRSTPQNNSSPGTSRVGSRNGTRNRRGELFTAEEPLVPKPVDGP
EPPAWLESRFGLLRESSEGGGPSAASLASVGACHGGSTTALEWTSLGVRV
IDSESCSPTGSSGGGVMSDGDDESSAFALSVTSVPSAVSDDEASEGAEAM
NFMPIKGARHRQAAKVMRATPKPALRKKARYRRRKRGRLQARSGGGGGEA
TVVPTAQPSSKSVVAPVPEWSQREPERDAAQNPIDNINSGNVVRKPEPEV
YDVWIPQRVFQGKGLPTLKRMMGGAEPQPQRSPRSRATQAAAEDKVEGDT
PTANPPNQGVDSPSSRDYHQLAPRQQQRKQVQATDKRCAVHHVSGPNEFE
TDNAVPPPQASVRAEYPGDGTTPARPADSERPVVFFAGVTHDTKNNETEA
KAKHRSGDGDDASYWSDDSRGGRSVLMDDAAAAVLDDGGGGSIVGWQQEG
QETEQDDDEYIDFAKRFSWRTAAEVVTQAEAEAEAWSKEERRRRQRARGD
ERQDRGVTADGADEQLQQEARQQTSAMAAAAAAALRARERSDNAALVAVG
RLRAPQSVFNPLHRTPSRPEMRR
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