prot_S-firma_F_contig104.577.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig104.577.1
Unique Nameprot_S-firma_F_contig104.577.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length796
Homology
BLAST of mRNA_S-firma_F_contig104.577.1 vs. uniprot
Match: A0A6H5K707_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K707_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 3.510e-107
Identity = 275/557 (49.37%), Postives = 313/557 (56.19%), Query Frame = 0
Query:   18 GRAMVR-GREQEERAKLLELDGSNMSPAICRRYALRGFGEALLLLAASTMCNAGLVRLPYADMLAPSQSSRSPPTTPEQ---------GAWGEWLRIIASFCSCGGSXXXXXXXXXXXXXXXXXXXXXXXXXXSTADGCYCCAAVALDALVREAKTAQSTTATSRKQCIL--------SFVVGRMPA---AEELLTRAIHHLCDSDWADWLRVPLIGAASQGDLDTVRLLLKAGVGGPGSKSGIGAWMIPGGDGRTLLHAAADSGNAGVIEALLDAGAGVVVNAVTGRRGDRQSSRGFSPFHVAVIKGSVPAAMVLARAGAAVHRRAPFQQSALHLAAGTGNAEMVYALVAELRLALEGKDDLGGTXXXXXXXXXXXXXXXXXLALGAQVDTRDECGRSPLFQACRCGGGGGSSFDGCRAVCELVXXXXXXXXXXXXXXXXXXXXXXYGHAETVRILLRHDADETARCDLGKTPGDVARGEALRAARRRSRCANTGGGGNTGVASGETGRGSGGEKDFPLEVAEAIHAALAAAPAGRAWRRRGWLVLLRARLIEFDK 553
            GRAM R G E+     +  +  S+MS A+ RR ALRG GE LLLLAAST+   GL+RLPY D LAPS   ++PP+             G WGEWLRI+A  CSC                             +    C+C  A     L   A                         + + R+     AE LL+ A   L + DWADWL+ PLIGAASQGDLD VRLLL AG GG   + GIGAWMIPGG+GRTLLHAAA  G+A V+EALLDAGAGVVVN V   RG  ++  GFSPFHVA I+GSVP A   ARAGAAV RRAPF+QSALHLAA TG   MV ALV ELRL + G+DDLG T                 L LGA V+ RD CGR+PLFQA +CGG  G    GC  +    XXXXXXXXXXXXXXXXXXXXXX G A+ VR                   GDV+R EALRAARRR +   T  GG           G G  +DFP E AEAI  ALAAAPAGRAWRRR WL +LRAR  E  K
Sbjct:   31 GRAMSRAGLEETAMPPVDVVAESSMSSAMRRRLALRGSGETLLLLAASTLSKDGLIRLPYLDTLAPS---KTPPSQSXXXXXXXXXXAGPWGEWLRIMALCCSCSSGGDGHNDITPAFSAATNEETY------TATSRCHCPIATVESFLGNAAXXXXXXXXXXXXXXXXXXXXXXXXQYRLIRLACRDMAESLLSSATRLLGERDWADWLKAPLIGAASQGDLDAVRLLLAAGAGGRSGR-GIGAWMIPGGEGRTLLHAAASGGSAAVVEALLDAGAGVVVNVVA--RGCLRTRDGFSPFHVAAIEGSVPVAXXXARAGAAVRRRAPFRQSALHLAAATGKTWMVRALVWELRLPVAGEDDLGATALHAAAWHGEHACVRALLELGADVNARDGCGRTPLFQASKCGGRNGGG--GCETIXXXXXXXXXXXXXXXXXXXXXXXXXXXGWADAVRXXXXXXXXXXXXXXXXXXXGDVSRREALRAARRRRKGFRTADGG-----------GGGCREDFPAETAEAIREALAAAPAGRAWRRRAWLAMLRARYFELGK 562          
BLAST of mRNA_S-firma_F_contig104.577.1 vs. uniprot
Match: D8LHM6_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM6_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 1.830e-73
Identity = 184/412 (44.66%), Postives = 213/412 (51.70%), Query Frame = 0
Query:   39 SNMSPAICRRYALRGFGEALLLLAASTMCNAGLVRLPYADMLAPSQS--SRSPP-----TTPEQGAWGEWLRIIASFCSCGGSXXXXXXXXXXXXXXXXXXXXXXXXXXSTADGCYCCAAVALDALVREAKTAQSTTATSRKQCILSFVVGRM-----------------------------------PAAEELLTRAIHHLCDSDWADWLRVPLIGAASQGDLDTVRLLLKAGVGGPGSKSGIGAWMIPGGDGRTLLHAAADSGNAGVIEALLDAGAGVVVNAVTGRRGDRQSSRGFSPFHVAVIKGSVPAAMVLARAGAAVHRRAPFQQSALHLAAGTGNAEMVYALVAELRLALEGKDDLGGTXXXXXXXXXXXXXXXXXLALGAQVDTRDECGRSPLFQACRCGGGGG 408
            S+MS  + RR ALRG GE LLLLAAST+   GLVRLPY D LAPS++  S+SPP      +   G WG+WLRI+A  CSC                             S  DG +     A  A  +E    ++ TATSR +C ++ V   +                                     AE LL+ A   L + DWADWL+ PLIGAASQGDLD VRLLL AG GG     GIGAWMIPGG+GRTLLHAAA  G+A V+EAL+DA                               GSVP A+ LA AGAAV RRAPF+QSALHLAA TGNA MV AL  ELRL + G+DDLG T                 L LGA VD RDECGR+PLFQA R G GGG
Sbjct:   20 SSMSSEMRRRLALRGSGETLLLLAASTLSKDGLVRLPYLDTLAPSKAPPSQSPPLPAAAASAAAGPWGDWLRIMALCCSCS----------------------------SGGDG-HNDFTPAFSAATKE----ETPTATSRCRCPIATVESFLGNAAXXXXXXXXXXXXXXXXXXXXXXYRLVRSACRDTAESLLSSATRLLGERDWADWLKAPLIGAASQGDLDAVRLLLAAGAGG----RGIGAWMIPGGEGRTLLHAAASGGSAAVVEALIDAA------------------------------GSVPVALALATAGAAVRRRAPFRQSALHLAAATGNAGMVRALAWELRLPVSGEDDLGATALHAAAWHGEHACARVLLELGADVDARDECGRTPLFQASRRGAGGG 364          
BLAST of mRNA_S-firma_F_contig104.577.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 9.980e-7
Identity = 43/85 (50.59%), Postives = 48/85 (56.47%), Query Frame = 0
Query:  203 WADWLRVPLIGAASQGDLDTVRLLLKAGVGGPGSKSGIGAWMIPGGDGRTLLHAAADSGNAGVIEALLDAGAGVVVNAV---TGR 284
            WA+WLRVPL  AA+ G+LD V  LLKAG  G     G G         RTLL AA   GNAGV+ ALL AG G   N +   TGR
Sbjct:   30 WAEWLRVPLEHAAASGNLDLVNKLLKAGADGEAGWRGCGD--------RTLLDAALSGGNAGVMSALLQAGCGPDANVLAPSTGR 106          
BLAST of mRNA_S-firma_F_contig104.577.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.500e-6
Identity = 41/81 (50.62%), Postives = 49/81 (60.49%), Query Frame = 0
Query:  198 LCD----SDWADWLRVPLIGAASQGDLDTVRLLLKAGVGGPGSKSGIGAWMIPGGDGRTLLHAAADSGNAGVIEALLDAGA 274
            +CD      WA+WLR PL  AA+  D D V+ LL AG       +G   W+  G DG+TLLHAAA+ GNA VI ALL AGA
Sbjct:   25 VCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGA------NGSTGWV--GCDGKTLLHAAAEGGNAQVIMALLRAGA 97          
BLAST of mRNA_S-firma_F_contig104.577.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 1.570e-5
Identity = 44/117 (37.61%), Postives = 58/117 (49.57%), Query Frame = 0
Query:  188 EELLTRAIHHLCDSDWADWLRVPLIGAASQGDLDTVRLLLKAGV-GGPGSKSGIGAWMIPGGDGRTLLHAAADSGNAGVIEALLDAGAGVVVNAVTGRRGDRQSSRGFSPFHVAVIK 303
            E+L      H   + WA+WLR PL  A ++G+      LL+AG  GG G K         G DGR+LL  A   GN+  + ALL+AG+   VNAVTG        R  +  H AV +
Sbjct:   16 EQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWK---------GCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVAR 123          
BLAST of mRNA_S-firma_F_contig104.577.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 7.600e-5
Identity = 114/410 (27.80%), Postives = 145/410 (35.37%), Query Frame = 0
Query:  203 WADWLRVPLIGAASQGDLDTVRLLLKAGVGGPGSKSGI-GAWMIPGGDG---------------------------RTLLHAAADSGNAGVIEALLDAGAGVVVNAVTGRRGDRQSSRGFSPFHVAVIKGSVPAAMVLARAGAAVHRRAPFQQSALHLAAGTGNAEMVYALVAELRLALEGKDDLGGTXXXXXXXXXXXXXXXXXLALGAQVDTRDECGRSPLFQACRCGGGGGSSFDGCRAVCELVXXXXXXXXXXXXXXXXXXXXXXYGHAET-------------------------------------VRILLRHDADETARCDLGKTPGDVARGEALRAARRRSRCANTGGGGNTGVASGETGRGSGGEKDFPLEVAEAIHAALAAAPAGRAWRRRGWLVLLRAR 547
            WADWLR PL  AA++G++  V  LL+AG  G     G  G  M+                                R+ LH A   G+      L+ AGA +       RR D        PFHVA   G       L   GA  + R  F ++ LH+AA  GN+ +V  L+ +   ++  +D+   +                 L  GA    R   G      A    GG          V    XXXXXXXXXX            +GH ET                                     V +LLR  A ETA    G+TP D  R  A   A                 +S  T R S   +    E+  A+   LA APA RAWRRR WLV+LRAR
Sbjct:   30 WADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANI-------RRVDPGDQ--CVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLHSPLMLASANGHRSTVEALLRAGADTTLRCYSGGVSDMAALEMAGG--------EVVDVXXXXXXXXXXXXAGGSIPLHASAVHGHDETMVALLKREGNFDEQDNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVA-----------------SSNVTPRNS---EKMQREMQRAL-VLLARAPADRAWRRRCWLVMLRAR 401          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig104.577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K707_9PHAE3.510e-10749.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHM6_ECTSI1.830e-7344.66Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5K513_9PHAE9.980e-750.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPN3_ECTSI2.500e-650.62Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ecto... [more]
D8LH19_ECTSI1.570e-537.61Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D8LE08_ECTSI7.600e-527.80Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 292..321
e-value: 5.6
score: 15.9
coord: 325..354
e-value: 230.0
score: 9.8
coord: 206..236
e-value: 290.0
score: 9.0
coord: 249..280
e-value: 4.3E-4
score: 29.6
coord: 359..388
e-value: 0.12
score: 21.5
coord: 392..429
e-value: 130.0
score: 11.4
coord: 433..462
e-value: 1.8E-6
score: 37.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 359..391
score: 12.743
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 292..324
score: 8.923
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 249..276
score: 11.14
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 433..465
score: 13.277
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 172..284
e-value: 6.1E-10
score: 40.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 410..490
e-value: 2.2E-18
score: 68.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 285..409
e-value: 1.9E-26
score: 94.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 210..475
NoneNo IPR availablePFAMPF13857Ank_5coord: 424..474
e-value: 7.0E-10
score: 39.0
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 208..345
coord: 356..470
coord: 288..470
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 199..277
e-value: 3.4E-6
score: 27.6
coord: 297..390
e-value: 1.4E-12
score: 48.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 210..474
score: 50.719

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig104contigS-firma_F_contig104:41580..45346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig104.577.1mRNA_S-firma_F_contig104.577.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig104 38646..46828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig104.577.1 ID=prot_S-firma_F_contig104.577.1|Name=mRNA_S-firma_F_contig104.577.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=796bp
MHVHVSCFTQCQALAAVGRAMVRGREQEERAKLLELDGSNMSPAICRRYA
LRGFGEALLLLAASTMCNAGLVRLPYADMLAPSQSSRSPPTTPEQGAWGE
WLRIIASFCSCGGSSNGDENSSSSNNDVDDAALAATTSSTSTADGCYCCA
AVALDALVREAKTAQSTTATSRKQCILSFVVGRMPAAEELLTRAIHHLCD
SDWADWLRVPLIGAASQGDLDTVRLLLKAGVGGPGSKSGIGAWMIPGGDG
RTLLHAAADSGNAGVIEALLDAGAGVVVNAVTGRRGDRQSSRGFSPFHVA
VIKGSVPAAMVLARAGAAVHRRAPFQQSALHLAAGTGNAEMVYALVAELR
LALEGKDDLGGTALHAAAWHGEAECVRALLALGAQVDTRDECGRSPLFQA
CRCGGGGGSSFDGCRAVCELVGAGADVNAKSEDGDTPLHVACRYGHAETV
RILLRHDADETARCDLGKTPGDVARGEALRAARRRSRCANTGGGGNTGVA
SGETGRGSGGEKDFPLEVAEAIHAALAAAPAGRAWRRRGWLVLLRARLIE
FDKRRLSESTEESESFAGSFEVGAGSSSLASVDLSVGMLVQDANGSVSLP
QTWAAMDLEEERNFFGPLGGLPEPFQENAAGVVRRELDEALCGEAARVSA
GCVRGLKRLCSRRHGLLGDDALRGNGVAGGFAAAASGGLELRAVGTSNDN
FVDVSLDYFPSTPEKTCAPGGGSTREEGWGFQRQDHSVAGTAAFDGEYSR
QHAVVVGGTTSSSEVDGSEVDVFYEVVLRTLEIADGLFEIIVGYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt