prot_S-firma_F_contig10396.567.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10396.567.1
Unique Nameprot_S-firma_F_contig10396.567.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length413
Homology
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BLAST of mRNA_S-firma_F_contig10396.567.1 vs. uniprot
Match: A0A6H5K1Y5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Y5_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 1.940e-138
Identity = 230/395 (58.23%), Postives = 288/395 (72.91%), Query Frame = 0 
Query:   36 VFGEVADEVIATFETGLSEALSEDNVRTAFQQWRRLLGTPGARIIAQDRRLWVGAKRAVRQHLSSYMSERSAKEAEKVVNATADFALHFAGLSRNTAKSDQEVFEELSNKLCHLQGAAEKLWPLAMRALPLLGYEEYAASTESAIRSHVLSRITLTVAASALLGLKPREDPFLMTVIAAFSLGHLTKDVAQNMAAFFQKAVMDQDTFDQTPTDQTS--------MSPADLAGELVSDTSTCKELGYQAFDFFKMVQRALSG------IQEDDDGVAGTDPMIDVSAVSPGTTPSPQ---FSDPQKSPHELNLDGMLLRQAIWLAAAIDNEHVSLEVLIACLVVGVASCCALVGVLCWRRA-ERRGRRTTSGKGGGTVRVHGMPQRVSVEKKAKMA 412
            VFGE ADEV+A+FET LSEALSE NVR A Q WRRLL TPG +++AQDRRLW GA++AVR++LS ++SE+SAKEA++ VNATADFALHFAGLSRN AKSD EVFEELS+KLCHLQGAAEKLWPLA+ ALPLLGY++YA   ESAIRS+ LSR+T TV+A+ LLGL PR DPFL+T+IA+FSLGHL+KDVAQNMAAFFQK ++DQ  FDQ  T Q+         +SP DLA ELV+ T TC+ELG+QAF FFK+VQRAL G      ++  D    G  P  + S       P PQ      P+++P +L L+G++LRQAIW+AA ID+++ SLEVL+ CLVVG       + V CWR   ++RGR     KG G V+++  P+     ++ K A
Sbjct:  134 VFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGVQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLAVLALPLLGYQDYAKKLESAIRSNALSRVTQTVSATVLLGLNPR-DPFLLTLIASFSLGHLSKDVAQNMAAFFQKVLVDQVRFDQPQTKQSLSDAEGAPLLSPVDLATELVTGTKTCQELGHQAFAFFKVVQRALEGSSPSFVVESVDVNDNGVHPSTEASTALQEGRPPPQPLQQRGPRRTPRKLKLEGIVLRQAIWVAAVIDSKYFSLEVLVVCLVVGCVLVFGSIWVCCWRGLRDKRGRPRMIKKGRGGVQLYQAPRPALAARREKTA 527
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10396.567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1Y5_9PHAE1.940e-13858.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 376..412
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..353
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..375
NoneNo IPR availableTMHMMTMhelixcoord: 353..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10396contigS-firma_F_contig10396:1457..4026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10396.567.1mRNA_S-firma_F_contig10396.567.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10396 1205..4345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10396.567.1 ID=prot_S-firma_F_contig10396.567.1|Name=mRNA_S-firma_F_contig10396.567.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=413bp
MNFVVRSMWLARFCHMSQSSRSFATCRSTRLDLRKVFGEVADEVIATFET
GLSEALSEDNVRTAFQQWRRLLGTPGARIIAQDRRLWVGAKRAVRQHLSS
YMSERSAKEAEKVVNATADFALHFAGLSRNTAKSDQEVFEELSNKLCHLQ
GAAEKLWPLAMRALPLLGYEEYAASTESAIRSHVLSRITLTVAASALLGL
KPREDPFLMTVIAAFSLGHLTKDVAQNMAAFFQKAVMDQDTFDQTPTDQT
SMSPADLAGELVSDTSTCKELGYQAFDFFKMVQRALSGIQEDDDGVAGTD
PMIDVSAVSPGTTPSPQFSDPQKSPHELNLDGMLLRQAIWLAAAIDNEHV
SLEVLIACLVVGVASCCALVGVLCWRRAERRGRRTTSGKGGGTVRVHGMP
QRVSVEKKAKMA*
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