prot_S-firma_F_contig10389.553.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10389.553.1
Unique Nameprot_S-firma_F_contig10389.553.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length162
Homology
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BLAST of mRNA_S-firma_F_contig10389.553.1 vs. uniprot
Match: A0A1F8EBL1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_41_21 TaxID=1802660 RepID=A0A1F8EBL1_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 7.240e-5
Identity = 36/154 (23.38%), Postives = 71/154 (46.10%), Query Frame = 0 
Query:    7 VADVLGDR--PHHVTGGTAAVLLGVVRDIQDVDVDVDLGDVWPVVRGAAGGDVVSAPAPYTDDQWDIVSAEVRVRGVTIDFTDASTGGVRLRHDASKDFHTVGVDLEAFTVVTVAPPGEAPFDVR--VTPLAALTAYKALLRRVVDVFDVRQLA 156
            + +++G    P  +TGG AA + G  R + D+D+++     +  +       +   P  + DD WD+    +   G  ID  D+++   +++   ++ +    VD     +  +       F +R  V P+  L  YK +L+R VDV D++ L+
Sbjct:    1 MVEIIGKHKIPFQITGGLAARIYGSSRPLADIDIEIPKNK-FKYILEEVKDYIKFGPKIFKDDNWDLYLMTLDYAGQEIDICDSNS---KIKDYMTEKWIENRVDFSRVVIQDI-------FGLRTPVVPIEDLIRYKKILKREVDVEDIKNLS 143
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BLAST of mRNA_S-firma_F_contig10389.553.1 vs. uniprot
Match: A0A455SFC1_9CHLR (Uncharacterized protein n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A455SFC1_9CHLR)

HSP 1 Score: 50.4 bits (119), Expect = 9.130e-5
Identity = 46/155 (29.68%), Postives = 72/155 (46.45%), Query Frame = 0 
Query:   16 HHV----TGGTAAVLLGVVRDIQDVDVDVDLGDVWPVVRGAAGGDVVSAPAPYTDDQWDIVSAEVRVRGVTIDFTDASTGGVRLRHDASKDFHTVGVDLEAFTVVTVAPPGE----APFDVRVTPLAALTAYKALLRRVVDVFDVRQLAALGEGS 162
            HHV    TGG AA++ G  R + D+D+DV   D+ P+V       +V       D+ +DI+   + + GV+ID + A            +D + +  D + F + T          A  ++ V   A L AYK L+ R  D+FD+   AA+ E S
Sbjct:   20 HHVAFQITGGLAALIYGSSRPLYDIDIDVAQKDM-PLVCELFRNAIVMPLERLQDENFDILMLTIELDGVSIDISQA------------EDAYCITPDGKRFRMETNPATARRCSFAGLELPVQRKADLIAYKRLVARETDLFDI---AAITEVS 158
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10389.553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1F8EBL1_9BACT7.240e-523.38Uncharacterized protein n=1 Tax=Candidatus Yanofsk... [more]
A0A455SFC1_9CHLR9.130e-529.68Uncharacterized protein n=2 Tax=Thermosporothrix T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.460.40coord: 1..157
e-value: 2.7E-10
score: 42.1
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 2..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10389contigS-firma_F_contig10389:3046..3531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10389.553.1mRNA_S-firma_F_contig10389.553.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10389 3046..3531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10389.553.1 ID=prot_S-firma_F_contig10389.553.1|Name=mRNA_S-firma_F_contig10389.553.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=162bp
VHALRWVADVLGDRPHHVTGGTAAVLLGVVRDIQDVDVDVDLGDVWPVVR
GAAGGDVVSAPAPYTDDQWDIVSAEVRVRGVTIDFTDASTGGVRLRHDAS
KDFHTVGVDLEAFTVVTVAPPGEAPFDVRVTPLAALTAYKALLRRVVDVF
DVRQLAALGEGS
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