prot_S-firma_F_contig10371.533.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10371.533.1
Unique Nameprot_S-firma_F_contig10371.533.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length91
Homology
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A835YRJ7_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ7_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.220e-45
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    1 RDVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDE 90
            RDVH    LAHYARACTDITF+FPFG+SELQGVAARG YDLTQHQE+SGK MEYFDE +K KYVPHVIEPSLGVDRLFLA++ SAYHEDE
Sbjct:  293 RDVHEAHKLAHYARACTDITFRFPFGQSELQGVAARGAYDLTQHQEASGKGMEYFDEATKRKYVPHVIEPSLGVDRLFLALLTSAYHEDE 382          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A6U1N9R4_9STRA (Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9R4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.040e-44
Identity = 73/90 (81.11%), Postives = 82/90 (91.11%), Query Frame = 0
Query:    2 DVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            +VHADD LAHYARACTDITFKFPFGESELQG+AARGCYDLTQHQE SGKS+EY  E +K K++PHVIEPSLGVDRL LA++ SAYH+DEV
Sbjct:  294 EVHADDKLAHYARACTDITFKFPFGESELQGIAARGCYDLTQHQEGSGKSLEYQVEGTKDKFLPHVIEPSLGVDRLLLALICSAYHKDEV 383          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A7R9YDS6_9STRA (Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDS6_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.130e-43
Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 0
Query:    1 RDVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            +DVH D  LAHYARACTDITFKFPFGESELQG+AARG YDL  HQ SSGKS EYFDE +K KYVPHVIEPS+GV+RLFLA++ SAYHEDEV
Sbjct:  328 KDVHEDCDLAHYARACTDITFKFPFGESELQGIAARGDYDLNAHQGSSGKSQEYFDEANKRKYVPHVIEPSIGVERLFLALVCSAYHEDEV 418          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A7S3AL73_9EUKA (Glycine--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AL73_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 3.610e-42
Identity = 68/90 (75.56%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    2 DVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            DVH    LAHYARACTDI FKFPFG  ELQGVAARGC+DLTQH  +SGKSMEY+D+  K KYVPHVIEPS+GVDRL LA++ SAY EDEV
Sbjct:   42 DVHPSHKLAHYARACTDIMFKFPFGTQELQGVAARGCFDLTQHAGASGKSMEYYDDVRKEKYVPHVIEPSIGVDRLMLAVLCSAYKEDEV 131          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A7S0CDM5_9STRA (Glycine--tRNA ligase (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDM5_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.320e-42
Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = 0
Query:    1 RDVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            RD+H  DGLAHYARACTDI F+FPFG  EL G+AARG YDLTQH E SGK+++YFDE +K +Y+PHVIEPSLGVDRL LA++ SAY ED +
Sbjct:  104 RDIHLGDGLAHYARACTDIEFRFPFGTQELMGIAARGNYDLTQHSEGSGKTLDYFDEVTKERYIPHVIEPSLGVDRLVLALICSAYREDTI 194          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A1G3Z6K9_9BACT (Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacterium GWC2_42_7 TaxID=1802430 RepID=A0A1G3Z6K9_9BACT)

HSP 1 Score: 152 bits (383), Expect = 6.810e-42
Identity = 66/90 (73.33%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    2 DVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            DVH  + LAHY+RACTDITFK+PFG  EL+G+AARGC+DLTQHQE+SGKS+EYFDE  K KY+PHVIEP++GVDR+FLAI+ SAY EDE+
Sbjct:  302 DVHPKNKLAHYSRACTDITFKYPFGVQELEGIAARGCFDLTQHQEASGKSLEYFDEEKKAKYLPHVIEPAVGVDRIFLAILCSAYDEDEI 391          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A7S0I0N9_9EUKA (Glycine--tRNA ligase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0N9_9EUKA)

HSP 1 Score: 144 bits (364), Expect = 1.290e-41
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    2 DVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            DVHA D LAHYA+ACTDI F+FPFG+ ELQGVAARG YDLTQH  +SGKSMEYFD+  K KYVPHVIEPS+GVDRL LA++ SAY  DEV
Sbjct:   24 DVHAKDKLAHYAQACTDIEFQFPFGKQELQGVAARGNYDLTQHAAASGKSMEYFDDALKEKYVPHVIEPSIGVDRLMLAVLTSAYCTDEV 113          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A7R9WRX3_9STRA (Glycine--tRNA ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRX3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.290e-41
Identity = 64/90 (71.11%), Postives = 77/90 (85.56%), Query Frame = 0
Query:    2 DVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            DVH  D LAHYARACTD+TF+FPFGE EL G+AARG +DLTQH E SGKS+++FD+++K KY+PH IEPSLGVDRL LA++ SAY EDEV
Sbjct:   85 DVHEGDSLAHYARACTDVTFRFPFGEQELMGIAARGNFDLTQHSEGSGKSLDFFDDQTKEKYIPHCIEPSLGVDRLMLALICSAYAEDEV 174          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: W7TM99_9STRA (Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM99_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.910e-41
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    1 RDVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            RDVH    LAHYA+ACTDI F+FPFG+ ELQG+AARG YDLTQHQ SSGKSMEYFDE +K +YVPHVIEPS+GVDRLFLA++ SAY EDE+
Sbjct:  380 RDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEI 470          
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Match: A0A7S4IYG8_9EUKA (Glycine--tRNA ligase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IYG8_9EUKA)

HSP 1 Score: 147 bits (371), Expect = 5.600e-41
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    2 DVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGKSMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV 91
            DVHAD  LAHYARACTDI FKFPFG  ELQGVAARGC+DL+ H ++SGKSMEY+DE  K KYVPHVIEPS+GVDRL LA++ SAY  DEV
Sbjct:  188 DVHADHKLAHYARACTDIMFKFPFGTQELQGVAARGCFDLSAHADASGKSMEYYDEERKEKYVPHVIEPSIGVDRLMLAVLTSAYCIDEV 277          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10371.533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRJ7_9STRA1.220e-4583.33Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A6U1N9R4_9STRA2.040e-4481.11Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YDS6_9STRA2.130e-4380.22Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3AL73_9EUKA3.610e-4275.56Glycine--tRNA ligase n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0CDM5_9STRA6.320e-4270.33Glycine--tRNA ligase (Fragment) n=1 Tax=Proboscia ... [more]
A0A1G3Z6K9_9BACT6.810e-4273.33Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacte... [more]
A0A7S0I0N9_9EUKA1.290e-4175.56Glycine--tRNA ligase n=1 Tax=Phaeocystis antarctic... [more]
A0A7R9WRX3_9STRA3.290e-4171.11Glycine--tRNA ligase n=1 Tax=Craspedostauros austr... [more]
W7TM99_9STRA4.910e-4175.82Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S4IYG8_9EUKA5.600e-4175.56Glycine--tRNA ligase n=1 Tax=Prymnesium polylepis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..91
e-value: 9.0E-36
score: 125.5
NoneNo IPR availablePANTHERPTHR10745:SF19coord: 4..90
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 7..87
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2PANTHERPTHR10745GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2coord: 4..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10371contigS-firma_F_contig10371:3732..4732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10371.533.1mRNA_S-firma_F_contig10371.533.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10371 3732..4732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10371.533.1 ID=prot_S-firma_F_contig10371.533.1|Name=mRNA_S-firma_F_contig10371.533.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=91bp
RDVHADDGLAHYARACTDITFKFPFGESELQGVAARGCYDLTQHQESSGK
SMEYFDERSKTKYVPHVIEPSLGVDRLFLAIMVSAYHEDEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027031Gly-tRNA_synthase/POLG2