prot_S-firma_F_contig10306.454.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10306.454.1
Unique Nameprot_S-firma_F_contig10306.454.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length112
Homology
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: A8DVA6_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A8DVA6_NEMVE)

HSP 1 Score: 90.5 bits (223), Expect = 3.310e-21
Identity = 51/113 (45.13%), Postives = 59/113 (52.21%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTAA--GACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADCVGPAEDTEAC 111
            +GEW  +S CT  C  GT  R R C + A   G     GPA +T  CN  PC V  DG Y  W A+  C   CSGG        + R RTC NPAP+ GGADC GPA  T +C
Sbjct:    9 YGEWGAWSNCTELCSGGTQLRMRTCDNPAPAYGGADCPGPANKTRSCNEHPCPV--DGQYGEWGAWSNCTELCSGGT-------QLRMRTCDNPAPAYGGADCPGPANKTRSC 112          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: A0A6P4ZEF7_BRABE (coadhesin-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZEF7_BRABE)

HSP 1 Score: 95.5 bits (236), Expect = 8.600e-21
Identity = 55/113 (48.67%), Postives = 70/113 (61.95%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTAA--GACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADCVGPAEDTEAC 111
            + +W P+S CTV+CGNGT TR R C++ A   G     GPA ET  C+TE  +  +DG +S W A+  C   C  GV     G  TR RTC+NPAP  GGADC GPA++T+AC
Sbjct:  315 WSDWGPWSTCTVTCGNGTETRDRTCTNPAPENGGTDCDGPAQETQACDTEV-SCPVDGGWSDWFAWSGCSVTC--GV-----GTETRDRTCTNPAPENGGADCDGPAQETQAC 419          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: A0A1S3JLN6_LINUN (uncharacterized protein LOC106174328 isoform X1 n=9 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JLN6_LINUN)

HSP 1 Score: 94.7 bits (234), Expect = 2.560e-20
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTA----AGACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADCVGPAEDTEAC 111
            + +WS +S CTV+C  GT  RTR C++ A       C+GLGPATET  CNT+ C V  +G  + WS++G C   C GG        ++R+RTC+NP P  GGADCVG   + + C
Sbjct: 2677 YSQWSSWSTCTVTCEGGTQERTRSCTNPAPANNGSDCSGLGPATETQQCNTQGCPV--NGGLTNWSSWGTCNVTCGGGS-------QSRTRTCTNPVPQNGGADCVGDRLELQQC 2782          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: UPI001604472F (uncharacterized protein LOC118410979 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001604472F)

HSP 1 Score: 93.6 bits (231), Expect = 6.160e-20
Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTAA--GACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADCVGPAEDTEAC 111
            + +W  +S C+V+CG GT TR + C++ A   G    +GPA +T  C+T   +  +DG +S W A+ +C   C  GV     G +TR RTC+NPAP+ GGADCVGPAEDT+AC
Sbjct:  287 WSDWGAWSDCSVTCGVGTQTRDKTCTNPAPANGGADCVGPAEDTQQCDTGV-SCPVDGGWSDWGAWSDCSVTC--GV-----GTQTRDRTCTNPAPANGGADCVGPAEDTQAC 391          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: A0A7S1GCK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCK9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.350e-20
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTAAG----ACA----GLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADCV 102
            + EW+ ++ C VSCG GT TR R C++ A       C     G+GP++E   CNT+ C VV+DG+Y+ WS +GEC   C G   G   G R R R C+NPAPS  GA CV
Sbjct:  662 YTEWTEWTDCDVSCGGGTQTRERSCTNPAPANGGVECDDEDDGIGPSSEERACNTDACVVVVDGDYTQWSEWGECDATC-GATWGVAVGARRRLRACTNPAPSRDGATCV 770          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: UPI000C038B79 (uncharacterized protein LOC111334195 isoform X1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C038B79)

HSP 1 Score: 92.8 bits (229), Expect = 1.190e-19
Identity = 52/117 (44.44%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTA----AGACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADC--VGPAEDTEAC 111
            + EWS FSPC+VSCGNGTM RTR CS  +    A  C+ +G + E   C  + C   ++G YS WS FG C   C GG+       + R+RTCSNP P  GG +C  +G A + E C
Sbjct:  245 YSEWSDFSPCSVSCGNGTMKRTRNCSQPSPINRALNCSSIGHSEEAKSCFLQECP--LNGGYSQWSVFGNCSKTCGGGI-------KKRNRTCSNPEPELGGRNCTSLGLAIEVEEC 352          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: A0A2B4S1V9_STYPI (Hemicentin-1 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S1V9_STYPI)

HSP 1 Score: 92.8 bits (229), Expect = 1.190e-19
Identity = 52/117 (44.44%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTA----AGACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADC--VGPAEDTEAC 111
            + EWS FSPC+VSCGNGTM RTR CS  +    A  C+ +G + E   C  + C   ++G YS WS FG C   C GG+       + R+RTCSNP P  GG +C  +G A + E C
Sbjct:  125 YSEWSDFSPCSVSCGNGTMKRTRNCSQPSPINRALNCSSIGHSEEAKSCFLQECP--LNGGYSQWSVFGNCSKTCGGGI-------KKRNRTCSNPEPELGGRNCTSLGLAIEVEEC 232          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: A0A1S3ILR9_LINUN (coadhesin-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3ILR9_LINUN)

HSP 1 Score: 88.6 bits (218), Expect = 2.660e-19
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSSTA----AGACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADCVGPAEDTEAC 111
            + +WS +  C+ +CG G+ TRTR C++         C+GLGP +ET  CNT+ C   I+G ++ WS++G C   C GG        ++R+RTC+NP P  GGADCVG   + + C
Sbjct:   98 YSQWSTWGTCSSTCGGGSQTRTRTCTNPTPAFNGNDCSGLGPNSETQQCNTQGCP--INGGFTNWSSWGTCNVTCGGGS-------QSRTRTCTNPVPQNGGADCVGIILELQQC 203          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: UPI0009E39337 (coadhesin-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E39337)

HSP 1 Score: 91.7 bits (226), Expect = 2.740e-19
Identity = 50/117 (42.74%), Postives = 69/117 (58.97%), Query Frame = 0
Query:    1 FGEWSPFSPCTVSCGNGTMTRTRECSST----AAGACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADC--VGPAEDTEAC 111
            + EWS +S C+V+CG G   R+R C++         C  LGPA+E++ CN +PC   IDGNY+ WSA+ EC   C GG+       +TR+R C+NP P  GG DC  +GP   T+ C
Sbjct:  260 YTEWSKWSDCSVTCGGGKRKRSRTCTNPHPKHGGKNCDDLGPASESLECNPDPCP--IDGNYTEWSAWSECNVTCDGGL-------QTRTRQCTNPPPQYGGKDCEELGPTNATQEC 367          
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Match: UPI00148A60C1 (uncharacterized protein LOC105341114 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A60C1)

HSP 1 Score: 91.7 bits (226), Expect = 2.890e-19
Identity = 55/115 (47.83%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    2 GEWSPF---SPCTVSCGNGTMTRTRECSSTAA--GACAGLGPATETVFCNTEPCTVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGADCVGPAEDTEAC 111
            G WS F   + C+VSCG G  TR+R CS+ A   G     G +T+T  CNT PC V  DG +SAW A+G C   C GG        R R RTC+NPAPS GGA+C+G    TE+C
Sbjct:  455 GGWSHFGHYAACSVSCGGGATTRSRTCSNPAPKWGGDDCSGSSTQTSSCNTNPCPV--DGLWSAWGAWGHCSKTCGGGT-------RERHRTCTNPAPSHGGANCIGSLTVTESC 560          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10306.454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A8DVA6_NEMVE3.310e-2145.13Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A6P4ZEF7_BRABE8.600e-2148.67coadhesin-like n=1 Tax=Branchiostoma belcheri TaxI... [more]
A0A1S3JLN6_LINUN2.560e-2044.35uncharacterized protein LOC106174328 isoform X1 n=... [more]
UPI001604472F6.160e-2046.02uncharacterized protein LOC118410979 n=1 Tax=Branc... [more]
A0A7S1GCK9_9STRA6.350e-2045.45Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
UPI000C038B791.190e-1944.44uncharacterized protein LOC111334195 isoform X1 n=... [more]
A0A2B4S1V9_STYPI1.190e-1944.44Hemicentin-1 n=1 Tax=Stylophora pistillata TaxID=5... [more]
A0A1S3ILR9_LINUN2.660e-1940.00coadhesin-like n=1 Tax=Lingula unguis TaxID=7574 R... [more]
UPI0009E393372.740e-1942.74coadhesin-like n=1 Tax=Orbicella faveolata TaxID=4... [more]
UPI00148A60C12.890e-1947.83uncharacterized protein LOC105341114 n=1 Tax=Crass... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 56..69
score: 30.99
coord: 100..111
score: 35.71
coord: 81..92
score: 48.44
NoneNo IPR availablePANTHERPTHR22906:SF11PROPERDINcoord: 2..111
NoneNo IPR availablePANTHERPTHR22906PROPERDINcoord: 2..111
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 58..112
e-value: 0.42
score: 12.7
coord: 1..51
e-value: 6.4E-12
score: 55.6
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 2..50
e-value: 7.7E-11
score: 42.0
coord: 59..111
e-value: 4.9E-5
score: 23.5
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1..51
score: 11.495
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 55..112
score: 9.894
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilyGENE3D2.20.100.10coord: 55..112
e-value: 1.4E-14
score: 56.0
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilyGENE3D2.20.100.10coord: 1..50
e-value: 1.8E-12
score: 49.5
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilySUPERFAMILY82895TSP-1 type 1 repeatcoord: 2..50
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilySUPERFAMILY82895TSP-1 type 1 repeatcoord: 54..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10306contigS-firma_F_contig10306:1922..2257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10306.454.1mRNA_S-firma_F_contig10306.454.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10306 1922..2257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10306.454.1 ID=prot_S-firma_F_contig10306.454.1|Name=mRNA_S-firma_F_contig10306.454.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=112bp
FGEWSPFSPCTVSCGNGTMTRTRECSSTAAGACAGLGPATETVFCNTEPC
TVVIDGNYSAWSAFGECVPDCSGGVVGEQAGVRTRSRTCSNPAPSAGGAD
CVGPAEDTEACV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036383TSP1_rpt_sf
IPR000884TSP1_rpt