prot_S-firma_F_contig103.444.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig103.444.1
Unique Nameprot_S-firma_F_contig103.444.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length124
Homology
BLAST of mRNA_S-firma_F_contig103.444.1 vs. uniprot
Match: D8LDQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ7_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 5.930e-16
Identity = 74/135 (54.81%), Postives = 84/135 (62.22%), Query Frame = 0
Query:    1 MAQAAAAGRDALYAEDVDMGEAMPWSFSPTSSGFSG-APERAPRA---GAAAATARSNPTG--AAILASSSXXXXXXXXXXXXXXXXXXXXXXXSN------SAPAWGMDSPAXXXXXXXXXPSSSPFAPEKWMA 123
            M QAAAAG DALYAEDVDMGEAMPWSF+P S+GF+G A   AP A    A A  +RS PTG  A+++ S+  XXXXXXX        XXXXXXX        +APAWGMDSP             SPF+PEKW A
Sbjct:   20 MGQAAAAGLDALYAEDVDMGEAMPWSFAPDSNGFAGGAASNAPSAQDLSAPATASRSTPTGPVASLVLSAPAXXXXXXXATAESNDAXXXXXXXXXXXXXXXTAPAWGMDSP-------------SPFSPEKWTA 141          
BLAST of mRNA_S-firma_F_contig103.444.1 vs. uniprot
Match: A0A6H5L6G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G4_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 6.440e-12
Identity = 57/133 (42.86%), Postives = 65/133 (48.87%), Query Frame = 0
Query:    2 AQAAAAGRDALYAEDVDMGEAMPWSFSPTSSGFS-GAPERAPRA---GAAAATARSNPTG-------AAILASSSXXXXXXXXXXXXXXXXXXXXXXXSNSAPAWGMDSPAXXXXXXXXXPSSSPFAPEKWMA 123
            A AAAAG DALYAEDVDMGEAMPWSF+P SSGF+ GA   AP A    A     RS PTG       +A  A++                        S +APAWGMDSP+              F+ EKW A
Sbjct:  882 AAAAAAGLDALYAEDVDMGEAMPWSFAPDSSGFAVGAASNAPSAQDLSAPIMALRSAPTGPVASLVLSAPAAAAGATPATGEPNDASPNTGASASTQSSGTAPAWGMDSPSL-------------FSAEKWTA 1001          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig103.444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDQ7_ECTSI5.930e-1654.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6G4_9PHAE6.440e-1242.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig103contigS-firma_F_contig103:55973..57140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig103.444.1mRNA_S-firma_F_contig103.444.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig103 55931..57185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig103.444.1 ID=prot_S-firma_F_contig103.444.1|Name=mRNA_S-firma_F_contig103.444.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=124bp
MAQAAAAGRDALYAEDVDMGEAMPWSFSPTSSGFSGAPERAPRAGAAAAT
ARSNPTGAAILASSSADSDPSNPAAAAASAASAASAGSSNSAPAWGMDSP
AGSAVSASSTPSSSPFAPEKWMA*
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