prot_S-firma_F_contig10289.422.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10289.422.1
Unique Nameprot_S-firma_F_contig10289.422.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length157
Homology
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BLAST of mRNA_S-firma_F_contig10289.422.1 vs. uniprot
Match: A0A7S2B5D8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5D8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 9.060e-9
Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 0 
Query:    8 GFLLGEEGRLSDAARAFQAAIALGGDHPALSQLWFNLGFTHHRGGDAPTALAAFKQSVATAASPSDAMQPLIKCAFISKQMGDLSATVGFLQRALEIAPGGGSLWGYLGETLNNLKRWNEAVAAYTKAV 136
            G  + + GR+  A+  F+ A  L    P  + + FN GF   +      AL   ++ V    +  +A    IKCA + +  GD +  V  L+ A+ + P   + + YLG+TLNNLKRWNEAV  Y  A+
Sbjct:   27 GIRMAQNGRVDQASEVFERAAVLA---PEDANVMFNAGFAMMQLQRPRDALRYMQKCVEINPNFREAH---IKCAQLLRDQGDPARVVNHLRAAIRLEPSKPNAYLYLGDTLNNLKRWNEAVGVYETAI 149
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BLAST of mRNA_S-firma_F_contig10289.422.1 vs. uniprot
Match: A0A543E7J5_9GAMM (Putative O-linked N-acetylglucosamine transferase (SPINDLY family) n=2 Tax=unclassified Pseudoxanthomonas TaxID=2645906 RepID=A0A543E7J5_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 1.820e-7
Identity = 48/135 (35.56%), Postives = 64/135 (47.41%), Query Frame = 0 
Query:    6 DLGFLLGEEGRLSDAARAFQAAIALGGDHPALSQLWFNLGFTHHRGGDAPTALAAFKQSVATAASPSDAMQPLIKCAFISKQMGDLSATVGFLQRALEIAPGGGSLWGYLGETLNNLKRWNEAVAAYTKAVDADP 140
            D   LL   G   DAA+       L    P  +Q+   L      GG    AL A  +  AT   P DAM  ++K + I  + G+       L+RAL +APG G  W YLGE+L+  +RW EA+ AYT+A    P
Sbjct:   39 DYALLLMHTGHARDAAKMLTDVRRLA---PGDAQVLLALAACLRAGGAIEDALQAADE--ATRRLPHDAMAWMLKGS-IDVRAGEYPRAETSLRRALSLAPGFGEAWHYLGESLHQQQRWEEAIHAYTRASAEQP 167
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10289.422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2B5D8_9STRA9.060e-933.33Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A543E7J5_9GAMM1.820e-735.56Putative O-linked N-acetylglucosamine transferase ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 1..34
e-value: 29.0
score: 10.9
coord: 109..142
e-value: 0.0014
score: 27.9
coord: 38..71
e-value: 27.0
score: 11.2
coord: 75..108
e-value: 250.0
score: 2.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 109..142
score: 10.06
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 75..108
score: 5.251
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 38..71
score: 7.169
NoneNo IPR availablePFAMPF13432TPR_16coord: 98..141
e-value: 0.0016
score: 19.1
coord: 11..72
e-value: 6.6E-10
score: 39.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..156
e-value: 2.5E-25
score: 91.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..156
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..156
score: 21.185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10289contigS-firma_F_contig10289:91..561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10289.422.1mRNA_S-firma_F_contig10289.422.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10289 91..573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10289.422.1 ID=prot_S-firma_F_contig10289.422.1|Name=mRNA_S-firma_F_contig10289.422.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=157bp
MFIHSDLGFLLGEEGRLSDAARAFQAAIALGGDHPALSQLWFNLGFTHHR
GGDAPTALAAFKQSVATAASPSDAMQPLIKCAFISKQMGDLSATVGFLQR
ALEIAPGGGSLWGYLGETLNNLKRWNEAVAAYTKAVDADPRNGELRLQLG
DTLMNM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat