prot_S-firma_F_contig10269.401.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10269.401.1
Unique Nameprot_S-firma_F_contig10269.401.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length41
Homology
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BLAST of mRNA_S-firma_F_contig10269.401.1 vs. uniprot
Match: G3G4N4_9PHAE (T-complex protein 1 epsilon subunit (Fragment) n=22 Tax=Fucaceae TaxID=3010 RepID=G3G4N4_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 4.360e-11
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0 
Query:    8 CSTPLISSAMRDTATLQLISAEPPPYTMRLSLIR 41
            CSTP ISSA+R+TATLQLISAEPPPYT+RLSLIR
Sbjct:   85 CSTPFISSAIRETATLQLISAEPPPYTIRLSLIR 118
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10269.401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
G3G4N4_9PHAE4.360e-1188.24T-complex protein 1 epsilon subunit (Fragment) n=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10269contigS-firma_F_contig10269:5000..5122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10269.401.1mRNA_S-firma_F_contig10269.401.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10269 5000..5122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10269.401.1 ID=prot_S-firma_F_contig10269.401.1|Name=mRNA_S-firma_F_contig10269.401.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=41bp
HRKITRTCSTPLISSAMRDTATLQLISAEPPPYTMRLSLIR
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