prot_S-firma_F_contig1025.383.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1025.383.1
Unique Nameprot_S-firma_F_contig1025.383.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length237
Homology
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BLAST of mRNA_S-firma_F_contig1025.383.1 vs. uniprot
Match: D7G5S5_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S5_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 2.310e-84
Identity = 124/176 (70.45%), Postives = 150/176 (85.23%), Query Frame = 0 
Query:   60 FATASACSHLRPTLPGAYREPTELWNHDKRAEAPSGVEQWVWDNRRFRPNSAPPVPKTLKSEADLKNLLASATVKPESLVVVKFHAIMCDASKAVEGRFRHTAAEFGAMDGQEVTFADVCFDSNRQLCEKMGIRSVPHVQIFSGAHGKVADFSIDPLHYDTLTSLLAERRESVRSG 235
             + AS CS++R  LPGAYRE TELW++DK A+AP+ V +WVWDNR+FRPN APP PKT+K+EA+L  LLAS     + LVVVKFHAI+CDAS+AVEGRFR TAAEFG MD ++VTFADVCFDSNRQLC++MGI+SVPHVQIFSG+ GK+ADFSI PL Y+TLTSLL+ERR+SV +G
Sbjct:   31 ISAASPCSNVRSPLPGAYRETTELWHNDKAADAPTDVVEWVWDNRQFRPNPAPPAPKTVKNEAELTKLLAS-----DGLVVVKFHAILCDASRAVEGRFRQTAAEFGDMDNKQVTFADVCFDSNRQLCKRMGIKSVPHVQIFSGSKGKIADFSIAPLQYNTLTSLLSERRDSVAAG 201
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BLAST of mRNA_S-firma_F_contig1025.383.1 vs. uniprot
Match: D7FJA4_ECTSI (Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA4_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.100e-37
Identity = 79/164 (48.17%), Postives = 100/164 (60.98%), Query Frame = 0 
Query:   73 LPGAYREPTELWNHDKRAEAPSGVEQWVWDNRRFRPNSAPPVPKTLKSEADLKNLLASATVKPESLVVVKFHAIMCDASKAVEGRFRHTAAEFGAMDGQEVTFADVCFDSNRQLCEKMGIRSVPHVQIFSGAHGKVADFSIDPLHYDTLTSLLAERRESVRSGK 236
            LPGAY   T LW+HD      SG    +               +T++ E +L  LL +   +P SLVVVKF   +C ASKAVE +F+ TAAEF   D  +V FA V   SN  LC+KMG+RSVPHVQIFSG +GK+ADFS+ P  YDTL +LL ERR+S+ + K
Sbjct:   34 LPGAYNPSTALWHHD------SGETSSI---------------QTVRDETELAQLLDAT--RPSSLVVVKFGKALCKASKAVEEKFKQTAAEFSECDKTDVQFASVDSGSNWLLCKKMGVRSVPHVQIFSGYNGKIADFSLAPPEYDTLDALLGERRDSMLAWK 174
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BLAST of mRNA_S-firma_F_contig1025.383.1 vs. uniprot
Match: A0A7S1T5P7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5P7_9RHOD)

HSP 1 Score: 67.0 bits (162), Expect = 6.210e-10
Identity = 47/144 (32.64%), Postives = 65/144 (45.14%), Query Frame = 0 
Query:   95 GVEQWVWDNR-----RFRP------NSAPPVP------KTLKSEADLKNLLASATVKPESLVVVKFHAIMCDASKAVEGRFRHTAAEFGAMDGQEVTFADVCFDSNRQLCEKMGIRSVPHVQIFSGAHGKVADFSIDPLHYDTL 221
            G   WV   R     R RP      N +P  P      + L S  D   +L        +LVV+KF A  C A KAV  +F   A EF      E  F ++ +   ++LC ++G+  +PHVQ +SG  G+V DF + P   D L
Sbjct:   50 GAHGWVTSKRTRMRPRLRPRACHAANKSPVAPLERDRVRRLNSTEDFLEMLEEGR---NTLVVIKFFASSCRACKAVAPKFVKAAQEF-----PEFLFCEIDYAELKELCWRLGVLHLPHVQFYSGERGRVEDFDVGPSTIDKL 185
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1025.383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5S5_ECTSI2.310e-8470.45Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
D7FJA4_ECTSI2.100e-3748.17Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpu... [more]
A0A7S1T5P7_9RHOD6.210e-1032.64Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 110..232
e-value: 2.9E-11
score: 45.1
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 95..222
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 95..222
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 133..210
e-value: 1.9E-8
score: 34.2
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 86..230
score: 8.848
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 109..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1025contigS-firma_F_contig1025:17765..22001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1025.383.1mRNA_S-firma_F_contig1025.383.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1025 17674..23839 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1025.383.1 ID=prot_S-firma_F_contig1025.383.1|Name=mRNA_S-firma_F_contig1025.383.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp
MHTRSQQHARGWCAFFCCTDCRPDPPHAPHAAAGARHRRSQPAASSIMLA
SSMTRAGRRFATASACSHLRPTLPGAYREPTELWNHDKRAEAPSGVEQWV
WDNRRFRPNSAPPVPKTLKSEADLKNLLASATVKPESLVVVKFHAIMCDA
SKAVEGRFRHTAAEFGAMDGQEVTFADVCFDSNRQLCEKMGIRSVPHVQI
FSGAHGKVADFSIDPLHYDTLTSLLAERRESVRSGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain