prot_S-firma_F_contig1020.316.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1020.316.1
Unique Nameprot_S-firma_F_contig1020.316.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length506
Homology
BLAST of mRNA_S-firma_F_contig1020.316.1 vs. uniprot
Match: D8LJK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK4_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 5.270e-158
Identity = 302/500 (60.40%), Postives = 351/500 (70.20%), Query Frame = 0
Query:   18 ILEGVLLVLIGVLSPFWLPLPLYRVREAVAGQRRRLRLLDRS--------AGDXXXXXXXXXXXXXXXXXIDRKTE--AEKGLMQQDANAAAAAAAVQGLPDLGRRYLDFMAQALGQGHDAAAAAVTAPYLHGGLPRYSGGHPDNFFIDVSSFDEVVLTTEWEADGFLAACMVFAIVTAEARRAPVAPGGTKRPYPLRTVIVGKGKAAQAQEALKVMRQTELIPPDCHIDVIE-GCGLTGADCHLQGLVGGVGGEGKXXXXXXXXXXDNRSRSFLGSCSMLLLRSPVLRTIFRRWGWRSGGRRDLHLARCVFSAQRRGSTFDHVDLFVSGGFSGVFQGEGGESEGPQGIRRRRQRRRSSRGEGKLSRGEVEEAMAAVNRVFVVQLDDLVRSYGFPRAIAPDRTPTLSAAMAGARGVLPACLRRVIAASNHLALTEFPDKVAAASAAGRYANEELRVTASSIAAAAVAEEPGIGRGRVAELGACMADLIASDFEALEAAGL 506
            +LEGVL++LIGVLS FWLPLPLYR+REAV  +RRRLRLL +S         G                  +D +T   A + L  QD  +AAAA+   G PDLGRRYLDF+AQALGQ H AAAAA+ AP    GLPR  GGHP+  F+DVS++DEVVLTTEWEADG LAAC++F++VTAE +RAP A  GTKRPYPLRT+IVG+GKA+QA+EAL+ MR+T+L+PPDC +DV+E G G    +   +           XXXXXXXXXXD   RSFLGSCSMLLL   +LR+  R   W SG RR L                        G   G      G S     +RR+  RR S+ G+ +LSR +VEEA+A VNRV VVQL+DLVR YGFPRAIAPDRTPTL+AA+AGARGVLP+CLRR IAASNHLALTEFPDKVA+A  AGRYANEELRVTASSIAAAAVAEEPG+GRGRVAELGACMADLIASDFEALE AGL
Sbjct:   12 VLEGVLVLLIGVLSTFWLPLPLYRLREAVTCRRRRLRLLRQSEESGGKVDVGADSKAIRPVGGRGAGNGGVDGQTTEGAAESLTGQDPKSAAAAS--DGFPDLGRRYLDFLAQALGQSHSAAAAAIAAPDRRTGLPRNGGGHPEGCFVDVSAYDEVVLTTEWEADGLLAACLLFSVVTAETKRAPFASDGTKRPYPLRTLIVGEGKASQAREALEAMRRTKLVPPDCRVDVLEPGEGAAKGEKRREDRGIEXXXXXXXXXXXXXXXXDGVWRSFLGSCSMLLL---LLRSTLR---WLSGRRRGL----------------------ARGQGEGXXXXXSGHS-----LRRQWHRRPSAGGDEELSREDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIKAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGL 476          
BLAST of mRNA_S-firma_F_contig1020.316.1 vs. uniprot
Match: A0A6H5KHY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY3_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 3.670e-117
Identity = 230/386 (59.59%), Postives = 269/386 (69.69%), Query Frame = 0
Query:  160 FDEVVLTTEWEADGFLAACMVFAIVTAEARRAPVAPGGTKRPYPLRTVIVGKGKAAQAQEALKVMRQTELIPPDCHIDVIEGCGLTGADCHLQGLVGGVGGEGKXXXXXXXXXXDNRSRSFLGSCSMLLLRSPVLRTIF-RRWGW------------RSGGRRDLHLA---------------RCVFSAQ-------RRG-STFDHVDLFVSGGFSGVFQG--EGGESEGP-QGIRRRRQRRRSSRGEGKLSRGEVEEAMAAVNRVFVVQLDDLVRSYGFPRAIAPDRTPTLSAAMAGARGVLPACLRRVIAASNHLALTEFPDKVAAASAAGRYANEELRVTASSIAAAAVAEEPGIGRGRVAELGACMADLIASDFEALEAAGL 506
            +D+VVLTTEWEADG LAAC++F++VTAE +RAP A  GTKRPYPLR +IVG+GKA QA+EAL+ MR+T LIPPDC +DV+E  G   A    +    G+  E +          D   RSFLGSCS+LLL    LR +F RR G             R   +R L +A               R  +  +       RRG S + H+D+FVSGGFSG F+G  EGGE   P    R +R RR S+ G+ +LSR +VEEA+A VNRV VVQL+DLVR YGFP AIAPDRTPTL+AA+AGARGVLP+CLRR IAASNHLALTEFPDKVA+A  AGRYANEELRVTASSIAAAAVAEEPG+GRGRVAELGACMADLIASDFEALE AGL
Sbjct:    3 YDQVVLTTEWEADGLLAACLLFSVVTAETKRAPFASDGTKRPYPLRNLIVGEGKANQAREALEAMRRTNLIPPDCRVDVLEA-GEGAAKGEKRQEDRGIEAEEEEEGGG-----DGVWRSFLGSCSVLLLLRSTLRWLFGRRRGLARTKLREVFNATRKDNQRVLVIALKPPRDLVEVLLESGRASWWGRAMGRGGGRRGCSRYKHIDMFVSGGFSGAFRGQREGGECSAPGHSPREQRHRRPSAGGDEELSRDDVEEALARVNRVLVVQLEDLVRPYGFPTAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIEAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGL 382          
BLAST of mRNA_S-firma_F_contig1020.316.1 vs. uniprot
Match: A0A6H5JGT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT4_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 6.300e-35
Identity = 89/169 (52.66%), Postives = 104/169 (61.54%), Query Frame = 0
Query:    1 MRWEGTGAS-LVLLLWCGILEGVLLVLIGVLSPFWLPLPLYRVREAVAGQRRRLRLLDRS---------AGDXXXXXXXXXXXXXXXXXIDRKTE-AEKGLMQQDANAAAAAAAVQGLPDLGRRYLDFMAQALGQGHDAAAAAVTAPYLHGGLPRYSGGHPDNFFIDVS 158
            M  +G G S LVLLLW  +LEGVL++LIGVLS FWLPLPLYR+REAV  +RRRLRLL +S           D                      E A + L +Q+  +AAAAA   G PDLGRRYLDF+AQALGQ H AAAAA+ AP    GLPR  GGHP+  F+DVS
Sbjct:    1 MESDGKGGSALVLLLWYKVLEGVLVLLIGVLSTFWLPLPLYRLREAVTCRRRRLRLLRQSEECGGKAGGGADSKAIRPVGGREAGNGGGHGHTNEGAAESLTRQEPKSAAAAA--DGFPDLGRRYLDFLAQALGQSHSAAAAAIAAPDRRPGLPRNGGGHPEGCFVDVS 167          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1020.316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJK4_ECTSI5.270e-15860.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHY3_9PHAE3.670e-11759.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGT4_9PHAE6.300e-3552.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..506
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1020contigS-firma_F_contig1020:244..5786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1020.316.1mRNA_S-firma_F_contig1020.316.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1020 244..5806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1020.316.1 ID=prot_S-firma_F_contig1020.316.1|Name=mRNA_S-firma_F_contig1020.316.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=506bp
MRWEGTGASLVLLLWCGILEGVLLVLIGVLSPFWLPLPLYRVREAVAGQR
RRLRLLDRSAGDGDGEDGSTTINGSGGGGIDRKTEAEKGLMQQDANAAAA
AAAVQGLPDLGRRYLDFMAQALGQGHDAAAAAVTAPYLHGGLPRYSGGHP
DNFFIDVSSFDEVVLTTEWEADGFLAACMVFAIVTAEARRAPVAPGGTKR
PYPLRTVIVGKGKAAQAQEALKVMRQTELIPPDCHIDVIEGCGLTGADCH
LQGLVGGVGGEGKQQQQQQQQEEDNRSRSFLGSCSMLLLRSPVLRTIFRR
WGWRSGGRRDLHLARCVFSAQRRGSTFDHVDLFVSGGFSGVFQGEGGESE
GPQGIRRRRQRRRSSRGEGKLSRGEVEEAMAAVNRVFVVQLDDLVRSYGF
PRAIAPDRTPTLSAAMAGARGVLPACLRRVIAASNHLALTEFPDKVAAAS
AAGRYANEELRVTASSIAAAAVAEEPGIGRGRVAELGACMADLIASDFEA
LEAAGL
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