prot_S-firma_F_contig10157.266.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10157.266.1
Unique Nameprot_S-firma_F_contig10157.266.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length243
Homology
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A1E7FDY8_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDY8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 3.040e-75
Identity = 108/156 (69.23%), Postives = 122/156 (78.21%), Query Frame = 0
Query:   85 RGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRR 240
            R  S GKWT +EDE+LR AV  + GKSWKKIA  L GRTDVQCLHRWQKVLKPGL+KGPWT +ED+ VI+LV  +G KKWS IA  L GRLGKQCRERWYNHLNPDI KG W  +EDK +I    E  N+WA IA+ + GRTDNAIKNRWNSTL+R
Sbjct:    1 RRASMGKWTEEEDELLREAVANYGGKSWKKIAGRLSGRTDVQCLHRWQKVLKPGLIKGPWTQEEDSKVIELVKMHGNKKWSFIARQLKGRLGKQCRERWYNHLNPDINKGEWTNDEDKALIQAHDELGNRWAEIAKRLSGRTDNAIKNRWNSTLKR 156          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7S4EQR6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQR6_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.060e-72
Identity = 108/157 (68.79%), Postives = 125/157 (79.62%), Query Frame = 0
Query:   85 RGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRL 241
            R  S GKWT +ED++LR AV  + GKSWKKIA  L GRTDVQCLHRWQKVLKPGL+KGPWTP+EDA V++LV  +G KKWS IA  L GRLGKQCRERWYNHLNPDI KG W  +EDK++I    E  N+WA IA+ + GRTDNAIKNRWNSTL+R+
Sbjct:  163 RRASMGKWTEEEDDLLREAVANYGGKSWKKIAGRLTGRTDVQCLHRWQKVLKPGLIKGPWTPEEDAKVVELVKVHGNKKWSFIARQLKGRLGKQCRERWYNHLNPDINKGEWTNDEDKLLIQAHSELGNRWAEIAKRLKGRTDNAIKNRWNSTLKRI 319          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A448ZBA0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBA0_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.320e-71
Identity = 110/157 (70.06%), Postives = 124/157 (78.98%), Query Frame = 0
Query:   85 RGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRL 241
            R  S GKWT +EDE+LR AV  + GKSWKKIA  L GRTDVQCLHRWQKVLKPGL+KGPWTP+ED  VI+LV  +G KKWS IA  L GRLGKQCRERWYNHLNPDI KG W  EEDK++I    E  N+WA IA+ + GRTDNAIKNRWNSTL+R+
Sbjct:  341 RRASMGKWTEEEDELLREAVADYGGKSWKKIAGRLTGRTDVQCLHRWQKVLKPGLIKGPWTPEEDGKVIELVKVHGNKKWSFIARQLKGRLGKQCRERWYNHLNPDINKGEWTNEEDKILIQAHSELGNRWAEIAKRLSGRTDNAIKNRWNSTLKRI 497          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7S4UQ57_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UQ57_9EUKA)

HSP 1 Score: 229 bits (583), Expect = 4.830e-71
Identity = 105/159 (66.04%), Postives = 125/159 (78.62%), Query Frame = 0
Query:   82 SKPRGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRR 240
            +KP   S+G WTP+ED+ LR AV +H+GKSWKKIA  L+GR D QCLHRWQKVL P LVKGPWT +ED LVI+LV ++G KKWS IA +L GR+GKQCRERW+NHLNPDI+KG W  EE+ +I   Q E  N+WA IA+ + GRTDNAIKN WNSTLRR
Sbjct:   23 TKPMRASKGNWTPEEDQKLREAVAKHNGKSWKKIAEHLEGREDTQCLHRWQKVLNPKLVKGPWTKEEDELVIELVKQHGPKKWSLIAEHLKGRIGKQCRERWHNHLNPDIKKGQWTKEEETIIRQKQKELGNRWAEIAKFLPGRTDNAIKNYWNSTLRR 181          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7J7Q8H4_9CHLO (Homeodomain-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q8H4_9CHLO)

HSP 1 Score: 225 bits (574), Expect = 1.790e-70
Identity = 102/159 (64.15%), Postives = 124/159 (77.99%), Query Frame = 0
Query:   86 GNSRGK-WTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRLTE 243
            G+S GK WTP+EDEILR AV  H+G++WKKIA   QGRTDVQCLHRWQKVL P L+KG WT +ED+L++ LVAE+G KKWS IA +L GR+GKQCRERW+NHLNPDI +  W  EED+ ++ L     N+WA +AR + GRTDNAIKN WNSTL+R  E
Sbjct:   74 GSSSGKGWTPEEDEILRRAVALHEGRNWKKIATYFQGRTDVQCLHRWQKVLNPELIKGCWTKEEDSLIVGLVAEHGAKKWSLIATSLPGRIGKQCRERWHNHLNPDINRAEWTREEDEQLVMLHASIGNQWAQLARNMPGRTDNAIKNHWNSTLKRRVE 232          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7S2MM62_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MM62_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.880e-70
Identity = 109/163 (66.87%), Postives = 128/163 (78.53%), Query Frame = 0
Query:   80 PTSKP-RGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRL 241
            PTS+  R  S+G WT  EDE LR AV  H+GK+WK+IA  L GRTDVQCLHRWQKVLKPG+VKGPWT +ED  VI LV+++G KKWS IAA L GRLGKQCRERW+NHLNPDI+K  W  EEDK+I+    +  NKWA I+R + GRTDNAIKNRWNSTL+R+
Sbjct:   79 PTSESKRRPSKGNWTLHEDETLRNAVGTHEGKNWKRIAECLAGRTDVQCLHRWQKVLKPGIVKGPWTEEEDQKVITLVSKHGCKKWSFIAAQLEGRLGKQCRERWFNHLNPDIKKDAWTAEEDKIIVNAHGKLGNKWAEISRILPGRTDNAIKNRWNSTLQRV 241          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7S2VAB5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAB5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.730e-70
Identity = 106/159 (66.67%), Postives = 127/159 (79.87%), Query Frame = 0
Query:   83 KPRGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRL 241
            K R  S GKW+ +EDE LR AV    GK+WKKIA+ L+GR+DVQCLHRWQKVL+PGL+KGPWTP+EDA V++LV  +GTKKWS IA  L+GRLGKQCRERWYNHL+P I KG W  EEDK+++    E  N+WA IA+ + GRTDNAIKNRWNSTL+RL
Sbjct:  279 KKRRASMGKWSEEEDECLRLAVKEFGGKNWKKIASRLKGRSDVQCLHRWQKVLRPGLIKGPWTPEEDATVVRLVKVHGTKKWSLIARQLNGRLGKQCRERWYNHLDPSINKGEWTQEEDKMLVDAHEELGNRWAEIAKRLPGRTDNAIKNRWNSTLKRL 437          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7S3CAI6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CAI6_9CHLO)

HSP 1 Score: 224 bits (571), Expect = 6.360e-70
Identity = 104/168 (61.90%), Postives = 128/168 (76.19%), Query Frame = 0
Query:   76 VVGLPTSKPRGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRLTE 243
            VVG   +  R +S+G WT +EDEILR AV + +GK+WKKIA     R+DVQCLHRWQKVL P L+KGPWT +ED  +I LV E+G KKWS IA NL GR+GKQCRERW+NHLNPDI++ PW  +EDKV+I    +F NKWA I++ + GRTDNAIKNRWNST++R  E
Sbjct:   91 VVGKTGAPKRKSSKGGWTSEEDEILRRAVQQCEGKNWKKIAEYFTDRSDVQCLHRWQKVLNPDLIKGPWTKEEDEKIIALVKEHGPKKWSVIADNLPGRIGKQCRERWHNHLNPDIKQDPWSVDEDKVLIDAHKKFGNKWAEISKLLPGRTDNAIKNRWNSTMKRKYE 258          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7S2LA83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA83_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.250e-69
Identity = 105/156 (67.31%), Postives = 122/156 (78.21%), Query Frame = 0
Query:   88 SRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQG--RTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRL 241
            S GKWTP ED  LR AV  +  K+WKKIAA+L G  R+DVQCLHRWQKVLKPGL+KG WT +EDALV  LV E+G KKWS IA +L GRLGKQCRERWYNHLNPDI++  W  EEDK+IIA   +  N+WA +A+ + GRTDNAIKNRWNSTL R+
Sbjct:   19 SMGKWTPSEDTALRIAVEANHAKNWKKIAATLPGQNRSDVQCLHRWQKVLKPGLIKGSWTKEEDALVTSLVQEHGQKKWSFIAKHLKGRLGKQCRERWYNHLNPDIKRCDWSEEEDKIIIAAHGQMGNRWAAMAKLLPGRTDNAIKNRWNSTLSRV 174          
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Match: A0A7S0CT81_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CT81_MICPS)

HSP 1 Score: 223 bits (568), Expect = 2.630e-69
Identity = 104/166 (62.65%), Postives = 126/166 (75.90%), Query Frame = 0
Query:   75 GVVGLPTSKPRGNSRGKWTPQEDEILRAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDALVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEEDKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRR 240
            G +G PT   R +++G WTP ED+ILR AV ++ GK+WKKIA   + RTDVQCLHRWQKVL P LVKGPWT +EDA +I+LV + G K+WS+IA  L GR+GKQCRERWYNHLNPDI++  W  EED+ +I     F NKWA IA+  VGRTDNAIKN WNSTL+R
Sbjct:   13 GRIGGPT---RRSAKGGWTPAEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVLNPELVKGPWTKEEDAKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHLNPDIKREEWSREEDRALIIAHRAFGNKWAEIAKTFVGRTDNAIKNHWNSTLKR 175          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10157.266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1E7FDY8_9STRA3.040e-7569.23Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fr... [more]
A0A7S4EQR6_9STRA1.060e-7268.79Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZBA0_9STRA1.320e-7170.06Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4UQ57_9EUKA4.830e-7166.04Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A7J7Q8H4_9CHLO1.790e-7064.15Homeodomain-like protein n=1 Tax=Scenedesmus sp. N... [more]
A0A7S2MM62_9STRA1.880e-7066.87Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2VAB5_9STRA2.730e-7066.67Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3CAI6_9CHLO6.360e-7061.90Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7S2LA83_9STRA1.250e-6967.31Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S0CT81_MICPS2.630e-6962.65Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 88..137
e-value: 4.6E-16
score: 69.4
coord: 192..240
e-value: 6.8E-10
score: 48.9
coord: 140..189
e-value: 8.5E-17
score: 71.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 89..135
e-value: 1.0E-15
score: 57.7
NoneNo IPR availableGENE3D1.10.10.60coord: 88..137
e-value: 1.4E-19
score: 71.9
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 144..202
e-value: 2.4E-17
score: 62.9
NoneNo IPR availableGENE3D1.10.10.60coord: 195..243
e-value: 1.6E-14
score: 55.5
NoneNo IPR availableGENE3D1.10.10.60coord: 138..193
e-value: 5.8E-26
score: 92.1
NoneNo IPR availablePANTHERPTHR45614:SF75TRANSCRIPTION FACTOR MYB3R-3coord: 61..241
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 61..241
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 136..191
score: 30.021
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 192..242
score: 18.395
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 84..135
score: 16.331
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 87..142
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 138..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10157contigS-firma_F_contig10157:2588..3316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10157.266.1mRNA_S-firma_F_contig10157.266.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10157 2588..3316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10157.266.1 ID=prot_S-firma_F_contig10157.266.1|Name=mRNA_S-firma_F_contig10157.266.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=243bp
PPLPALTTHSHHHHQMNSVPPPKVVPPVPLPAPSVPIMPPVMHSSAFPRP
PAIAPGVPSVLQSATNLAVGASALGVVGLPTSKPRGNSRGKWTPQEDEIL
RAAVIRHDGKSWKKIAASLQGRTDVQCLHRWQKVLKPGLVKGPWTPQEDA
LVIKLVAEYGTKKWSQIAANLHGRLGKQCRERWYNHLNPDIRKGPWECEE
DKVIIALQVEFRNKWALIAREIVGRTDNAIKNRWNSTLRRLTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR015495Myb-like_TF
IPR001005SANT/Myb