prot_S-firma_F_contig10108.200.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10108.200.1
Unique Nameprot_S-firma_F_contig10108.200.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length114
Homology
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BLAST of mRNA_S-firma_F_contig10108.200.1 vs. uniprot
Match: A0A6H5JSM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM9_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 5.590e-12
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0 
Query:    7 GYYARKSCGEMGAGLDVEKAIAESIRAKTLEFEREREAYIDAAKQLL 53
            G +A +S  E+G GLD +K +AESIRAKTLEFE EREAYIDAAKQLL
Sbjct:    6 GDFAWESVEELGVGLDAQKTLAESIRAKTLEFESEREAYIDAAKQLL 52
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BLAST of mRNA_S-firma_F_contig10108.200.1 vs. uniprot
Match: D8LSK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK9_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 7.900e-12
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    7 GYYARKSCGEMGAGLDVEKAIAESIRAKTLEFEREREAYIDAAKQLL 53
            G +A +S  E+G GLD +K +AESIRAKTLEFEREREAYIDAAKQLL
Sbjct:    6 GDFAWESVEELGVGLDAQKTLAESIRAKTLEFEREREAYIDAAKQLL 52
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10108.200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSM9_9PHAE5.590e-1272.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK9_ECTSI7.900e-1274.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10108contigS-firma_F_contig10108:1131..2318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10108.200.1mRNA_S-firma_F_contig10108.200.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10108 1131..2547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10108.200.1 ID=prot_S-firma_F_contig10108.200.1|Name=mRNA_S-firma_F_contig10108.200.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=114bp
MERQDRGYYARKSCGEMGAGLDVEKAIAESIRAKTLEFEREREAYIDAAK
QLLAPPPPPPRPITEGSSGGNTGVGGEGEGIRGGAAETRRNDGDDGGHHQ
QHRQDRHGLRRPRP
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