prot_S-firma_F_contig101.186.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig101.186.1
Unique Nameprot_S-firma_F_contig101.186.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length328
Homology
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: D8LFR7_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFR7_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 1.340e-130
Identity = 203/266 (76.32%), Postives = 223/266 (83.83%), Query Frame = 0
Query:    3 RRLLHNLLMLAGLSTLFRRSMASHAAAGTRYAVELLAPAEGPVLGVGARNAKASARPAYRVLQEPAGTPFDGLQVCVWVDSTAEGKDTPARSGPFCFEGPQQQLPIDGLGVGSHRISAAVVAPSQQGPTQ-LSEVTTAQIDVVLQQDFVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLP-VDSVRLSLGGRVLGDEETAEGLDLFNRQREL 266
            R+L +  +++A LS  FRR+MAS+AA  TRYAV L+APAEGPV GV  RNAKASA  AY VLQEP G PFDGLQVCVWVDS  EGKDT +RSGPFCFEG QQ+LPI+GL VGSHR+SAAVVAP+Q GPTQ +SEVTTAQI+VVLQ+DF PSY+WQQV      PPGLEVQLPLDGVGQKRARVPPSWRLQLY+P E     +GGGFFVRTDL AGSTVLELRREIAR PRFG   V+ VRLSLGGRVLGDEETAEGLDLFNRQREL
Sbjct:    2 RKLAYAWMIVASLSQSFRRNMASYAAGTTRYAVRLVAPAEGPVFGVATRNAKASAVSAYEVLQEPVGAPFDGLQVCVWVDSMIEGKDTASRSGPFCFEGLQQELPINGLEVGSHRLSAAVVAPTQDGPTQQISEVTTAQINVVLQEDFAPSYKWQQVYPWQSVPPGLEVQLPLDGVGQKRARVPPSWRLQLYVPEE-----SGGGFFVRTDLRAGSTVLELRREIARQPRFGGGGVERVRLSLGGRVLGDEETAEGLDLFNRQREL 262          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A836CHB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.240e-40
Identity = 89/199 (44.72%), Postives = 118/199 (59.30%), Query Frame = 0
Query:   75 LQVCVWVDSTAEGKDTP-ARSGPFCFEGPQQQLPIDGLGVGSHRISAAVVAP-SQQGPTQL---SEVTTAQIDVVLQQDFVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYI--PGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLPVDSVRLSLGGRVLGDEETAEGLDLFNRQREL 266
            L+VC+W D    G     A SGPFCF  PQ  + +  LG G H +SAAVV   S  G T L   +E     + V +++DF P+Y WQ V      PPGLEV+LPLDG G++ AR+P  W+LQL++  P  P     G GFF R  +  G+TV +LR+ IA H    LP++ V ++LGG  + D ET + LDLFNRQ+EL
Sbjct:   68 LKVCIWGDFLDPGTGAQRAASGPFCFAEPQGAVNMQALGAGLHVLSAAVVQDRSADGETMLELSAERARHTLRVDVKRDFAPTYAWQPVREWQGVPPGLEVRLPLDGSGERTARIPQPWQLQLFVQDPHLP-----GDGFFFRQQITGGTTVGDLRQAIASHREVQLPLELVWMTLGGAPVADHETVKELDLFNRQKEL 261          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S3EU40_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EU40_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 2.080e-17
Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = 0
Query:  149 FVPSYEWQQVXXXXXX-PPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLPVDSVRLSLGGRVLGDEETAEGLDLFNRQREL 266
            F+PSY+WQ +       PPGL+V LPLDG  QKRAR+PP+W+LQ+++       G   G++   ++ + +T L LRR  A       PV+ VRL L G  LGD +TAE L+LF +  +L
Sbjct:   18 FLPSYQWQFIPEGVTGVPPGLQVDLPLDG-RQKRARIPPTWQLQVWL-------GYDLGYWRYREVSSNTTALHLRRAAAAFA--DAPVERVRLRLAGAELGDHQTAEELNLFGQSSQL 126          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S0JI27_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI27_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 3.570e-12
Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  149 FVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLPVDSVRLSLGGR--VLGDEETAEGLDLFNRQRELTPSL 270
            F  +YEWQ++      PPGL+V+LPLDG G +RAR+P  W+LQ+++ G+  G       ++R  +   +TV E+R   A H   G+P+  V L+ GG      D++T E L  F+R  E+  S+
Sbjct:  127 FEAAYEWQRIEPGVTLPPGLDVELPLDG-GAQRARIPQRWQLQVWL-GDEWG-------YLRKQVTRETTVAEIRDAAATHA--GVPLSRVSLTFGGGGGEPDDDKTVEELRFFSRMHEVDVSI 239          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S4BSU6_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BSU6_CHRCT)

HSP 1 Score: 73.2 bits (178), Expect = 5.760e-11
Identity = 49/127 (38.58%), Postives = 62/127 (48.82%), Query Frame = 0
Query:  148 DFVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLEL--------RREIARHPRFGLPVDSVRLSLGGRVLGDEETAEGLDLFNRQREL 266
            DF  SYEWQ V      P GLEVQL LDG  ++ AR+PP+WRLQL++     G G G   F+RTD+   + V E+             RH   G       L  G   L  E T E   LF+R+ +L
Sbjct:  169 DFAASYEWQSVREGQSVPSGLEVQLSLDGSHRRSARIPPTWRLQLFL-----GEGLG---FLRTDVLRDTRVREVLAAAEAQAAAAALRHHLDGAHKACFSLFAGSDWLDAESTVESAQLFSRRGQL 287          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S4F646_CHRCT (Hypothetical protein n=4 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F646_CHRCT)

HSP 1 Score: 73.2 bits (178), Expect = 6.610e-11
Identity = 49/127 (38.58%), Postives = 62/127 (48.82%), Query Frame = 0
Query:  148 DFVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLEL--------RREIARHPRFGLPVDSVRLSLGGRVLGDEETAEGLDLFNRQREL 266
            DF  SYEWQ V      P GLEVQL LDG  ++ AR+PP+WRLQL++     G G G   F+RTD+   + V E+             RH   G       L  G   L  E T E   LF+R+ +L
Sbjct:  188 DFAASYEWQSVREGQSVPSGLEVQLSLDGSHRRSARIPPTWRLQLFL-----GEGLG---FLRTDVLRDTRVREVLAAAEAQAAAAALRHHLDGAHKACFSLFAGSDWLDAESTVESAQLFSRRGQL 306          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S2CCU8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CCU8_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 6.910e-10
Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:  165 PPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLPVDSVRLSLGGRVLGDEE-TAEGLDLFNRQ 263
            PPGLE++LPLDGVG +RAR+PP+W L L++  +P     G G     ++  G+T+ ELRR ++         D+V L +G  VL D++ TAE + LF R+
Sbjct:    8 PPGLEIELPLDGVGIRRARIPPAWVLPLWM--DP-----GTGSKRSIEVTRGTTIGELRRFVSVECTR-CDADAVTLIIGDIVLDDDQATAEDVGLFERR 99          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S2GH90_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GH90_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.980e-9
Identity = 43/126 (34.13%), Postives = 60/126 (47.62%), Query Frame = 0
Query:  148 DFVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLPVDSVRLSL---GGRVLGDEETAEGLDLFNRQRELTPSL 270
            +F P+YEW  +      P GLE+ L +DG   +  R+PP WRLQL++             FVR D++  S +  +  E  R    G+    VR+S        L  + TAE L LF R+R L  SL
Sbjct:   97 EFTPTYEWGPIGAHQSVPEGLEIVLGMDGTRTRSGRIPPVWRLQLWVDQAHR--------FVRVDVNRESRLSTITAEAGRV--LGVNPSRVRVSCPAGDSSPLDPQATAEELHLFERRRSLRMSL 212          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S0L4V0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L4V0_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 3.370e-9
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 0
Query:  149 FVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARH 229
            F+PSYEWQ V      P GLEV L LDG  Q+ AR+PPSWRLQ+Y+       GA  GF +RTD+   + + E+      H
Sbjct:  158 FLPSYEWQDVAEGQAVPSGLEVHLSLDGSHQRTARIPPSWRLQVYL-------GAHLGF-LRTDVQRTTKLHEIIAAATEH 230          
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Match: A0A7S2MAR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MAR9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.770e-8
Identity = 46/143 (32.17%), Postives = 65/143 (45.45%), Query Frame = 0
Query:  102 PQQQLPIDGLGVGSHRISAAVVAPSQ---QGPTQLSEVTTAQIDVVLQQDFVPSYEWQQVXXXXXXPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEGGGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLP-VDSVR 240
            P   +   G+  G H I A +    +   QG   +  V       +L   F PSY W++V      PPGLEV++ L G G K AR+P +WR+Q+++             F+R DL A + V  L  E A+     L  VD VR
Sbjct:   29 PLAPMQFSGMASGKHTIWALLYDKGRDTVQGAVDIRRVE------ILPTSFQPSYSWERVYPQQSIPPGLEVRIDLGGSGLKTARIPQTWRIQVWVDEVAR--------FLRADLTATTQVTVLLTEAAKMAGVSLSCVDLVR 157          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig101.186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LFR7_ECTSI1.340e-13076.32Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A836CHB5_9STRA1.240e-4044.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3EU40_9EUKA2.080e-1742.86Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0JI27_9EUKA3.570e-1237.10Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S4BSU6_CHRCT5.760e-1138.58Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S4F646_CHRCT6.610e-1138.58Hypothetical protein n=4 Tax=Chrysotila carterae T... [more]
A0A7S2CCU8_9EUKA6.910e-1042.00Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S2GH90_9STRA2.980e-934.13Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0L4V0_9EUKA3.370e-945.68Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S2MAR9_9STRA1.770e-832.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 325..327
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 303..324
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 266..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.701
NoneNo IPR availableTMHMMTMhelixcoord: 266..283
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 190..259
score: 10.506
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 208..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig101contigS-firma_F_contig101:55064..57641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig101.186.1mRNA_S-firma_F_contig101.186.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig101 54692..57671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig101.186.1 ID=prot_S-firma_F_contig101.186.1|Name=mRNA_S-firma_F_contig101.186.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=328bp
MPRRLLHNLLMLAGLSTLFRRSMASHAAAGTRYAVELLAPAEGPVLGVGA
RNAKASARPAYRVLQEPAGTPFDGLQVCVWVDSTAEGKDTPARSGPFCFE
GPQQQLPIDGLGVGSHRISAAVVAPSQQGPTQLSEVTTAQIDVVLQQDFV
PSYEWQQVYPWQSVPPGLEVQLPLDGVGQKRARVPPSWRLQLYIPGEPEG
GGAGGGFFVRTDLHAGSTVLELRREIARHPRFGLPVDSVRLSLGGRVLGD
EETAEGLDLFNRQRELTPSLLLLLLLLLIAVRFRQWLRVFGRAGRRSWPG
SGCMYYCCMHFLFFVGEIVCSGSRRLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR000626Ubiquitin_dom