prot_S-firma_F_contig1009.168.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1009.168.1
Unique Nameprot_S-firma_F_contig1009.168.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length1218
Homology
BLAST of mRNA_S-firma_F_contig1009.168.1 vs. uniprot
Match: D8LCE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE9_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 5.960e-49
Identity = 481/1306 (36.83%), Postives = 598/1306 (45.79%), Query Frame = 0
Query:   26 PVPTTRTLRMFLGVLKHNPAGVIREVGVLLMLHVSSTEVA----IAADAAAA---EVPSPLLSNIGCTGGGRGGRGPQPQSKQRRESAHLKRRVEEAAAVLAVALSTEKRRVGLMAAG-GVTATRLTKNNKKTRFEHQLRQPAKVEDRLQAWAATRGREASALKEILALSAEGE---LGASSAGARLVRDLAGRIPVGQVGKALPEAGRVLGFISSATGAVAQDCANVTGSAVADAPVEPDSFSNGTMDEPSAAGETFRPSPNDLVVSESSTSNSAGSSDQPIEDGGFSDSRSSAAPAIWES--SSSDLMPDSEQRAENAPPRLRTSDPSVI-----------------SGSSSNSAGSSDHRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASFVSALSLCDE-------DYG-----------ELAPDLIRRIKYYRSRLERSVQQELAQSGSDEAFFVNDAAGSTPAGATVAVEDRSLDLLNGGSAPSVDDGLVGGAGAAEEPVAAANWLAGP-------FDGNALGSPNPSSDGASFTI-WETSTSEAESEKRCHKDASPADHGTP-AAAATSDEQPMELKMPSSWPADPLENNRDPLGDIPLVSDDGERNLWDDILDEQLSKCPPVQPRVARRMSXXXXXXXXXXXXXXXXXXXXADGGRPSFA-TMSAEPVVVAGNHEHAGEEKTKEEWEEELIGQELDDGERDXXXXXXXXXXXXKKEENMPHDSSSSGLEFDPN-APSLGLLSDALQHQYQHEEEQKEEPAAADLSLSRKYASLLTKACG-------SMVDIIQGVNVDISLVRAVDTAAAAACAAQVAVSEAMALLDKHLATLPDDTSTRSELQGSLSPPSLSSSAAGEAA-------------------------------------EEARCGAETSRLPHERGGVCCDEHKPAQSEGGRGGGKLKPL--FSSFDVDVGAWNXXXXXXXXXXXXXGMDDDARRTQTVKDGKEGRQTGEETRFKGKWGVGSHEGCAVGGPAGCGKPWGSIVAESKLPVQWYVEQNPGNMGGSLAQLCGRIERRXXXXXXXXXAPEMEGGATSTPAPRVPSCASLSSRSXXXSSPPSTSYTVASGSPWALGHAQGNE---ESLLAMPSASAAEGAAATES-----------AVEAYRLSHSHTEMTERWPAGVLVASKALVAEVPGLEEHDRRTFEAVFERSVRRGVLGHPR 1212
            PVPT R LRM L VLKHNPAG ++EVGVLLMLH ++ EVA     +AD AA    E PS L+   G  G G      Q + KQR ESA LKRRV+EAAAVLA+AL+  K        G GV      K  +KTRF HQLRQP  VED LQ WAATRGRE   L+E+L LS EGE   +  S + A+LVRD   RI   +V KALPEAG VL FIS A GAV         S  ADA V+        +D PS AG        +L+      S+ AG+S           S SS+ P IW S  S SD +  +   A                                  S++ SAGS +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXX  A   S    C         D G           +L  D+       R + +      ++ S S +   V  AAG+   GA V+V   +  L+      S  D  V       E  + +  LA P        + +    P+ +S G    + W+   S  +  ++     S +  G   A AA  D Q  E+     W  DPL    D +GDIPLV++DGERN WDDIL+EQLSKC P+Q R  R  +                       G  S A T  A   +   +  H  E +T   WE     +  ++ +               ++ + P   +   LE  P+ AP  G    A+ +       Q  + +         Y +    A G       S        N+  + V A  T   AA AA+ A S A A  ++ + T     ++   L+   S  +  S A   AA                                     EE R    + R P      C DE  P  ++    G  +  L  F + DV+V  W+              M D  R    ++ G  GR+TG      G+       G  +     CGK WGSI  ES L VQ +VE+  G+MGGSLAQLC + E + XXXXXXXX PE+E            SC   + +  XX                     +G E    SLL    A +A  AA TES           A  +YRLS  H EMT  WP  +LVASK+L+A+VPGLEEH RR+F+   E+SVRRGV+G PR
Sbjct:  257 PVPTARCLRMLLSVLKHNPAGAVQEVGVLLMLHAAAIEVAKPTPASADGAADHPNETPSALVPAKGGVGAGTARARHQTRVKQREESAKLKRRVDEAAAVLAIALTAAKTSGMRTPRGAGVAVIAKKKGGRKTRFRHQLRQPPNVEDGLQVWAATRGREVFGLRELLGLS-EGEPPVVQPSPSHAQLVRDRVARISARKVEKALPEAGHVLEFISYAVGAVVGVITTAGDSNDADALVD--------LDRPSTAGG------GNLLTGGKGESSVAGASL----------SASSSDPKIWASTTSGSDAVVAAGDLANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEDSAAASAGSIEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCADFAPGSLSAEXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAEIGSTQGSCTTSATCGGGDGGAALTAPEAPAFDLERDVTDSCLGLRGKHDADSSPLVSPSPSRDDAAVA-AAGACAGGALVSVPGETPSLV----VSSFSDDAVAXXXT-REASSGSRKLAAPRQPLFTLAESDDEDFPSSASSGTQVVVVWKRPKSHDDYFQQQKPRTSASGAGAADALAAAEDSQNGEM-----WTVDPL---GDIMGDIPLVTEDGERNAWDDILEEQLSKCRPLQDRADRSPASPLINQRFYSDRGNGGGPITTTAGDGSAAYTHDASSDIDPSSQLHGRESQT---WENNYGYRRWEEPD----PTNTSFIPEAPQQRSTPPGGTFRPLELSPSGAPVTGGRVRAMLNARVASRSQDGDLSGVLEQRGLDYGAQGHDAVGENGFKGGSPTGGYDDPNIYWAEVTAGATREVAAEAAERAASAAEAY-EQRMRTGRGGHASGEWLEARSSAIAAGSIARVAAATXXXXXQLKAXXXXXXXXXXXXXXXXXXXXRLHLPQREEDRWEQASDRRP------CRDE--PDGNDDTEQGNAMPSLSAFYTVDVNVADWDWSSVGGDKR-----MSDVGRSAGVLEGG--GRETGCGPESLGESSTKRATGFGMATTLRCGKAWGSIACESNLSVQRHVEKRKGHMGGSLAQLCEKNELKKXXXXXXXXXPEVEDDMRLKSTTSKWSCQLTNRQHRXXXXXXXXXXXXXXXXXXXXXXXKGRETNGRSLLG--GAGSALSAAGTESVQTPPITPHALAPSSYRLSDQHAEMTRLWPTALLVASKSLIADVPGLEEHGRRSFKEALEQSVRRGVMGRPR 1498          
BLAST of mRNA_S-firma_F_contig1009.168.1 vs. uniprot
Match: A0A6H5JI23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI23_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.540e-39
Identity = 491/1559 (31.49%), Postives = 607/1559 (38.94%), Query Frame = 0
Query:   19 TPVLLPVPVPTTRTLRMFLGVLKHNPAGVIREVGVLLMLHVSSTEVA----IAADAAAA---EVPSPLLSNIGCTGGGRGGRGPQPQSKQRRESAHLKRRVEEAAAVLAVALSTEKRRVGLMAAGGVTATRLTKNNKKTRFEHQLRQPAKVEDRLQAWAATRGREASALKEILALSAEGE---LGASSAGARLVRDLAGRIPVGQVGKALPEAGRVLGFISSATGAVAQDCANVTGSAVADAPVEPDSFSNGTMDEPSAAGETFRPSPNDLVVSESSTSNSAGSSDQPIEDGGFSDSRSSAAPAIWES--SSSDLMPDSEQRAENAPPRLRTSDPSVI-----------------SGSSSNSAGSSDHRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASFVS------------------ALSLCDEDYGELAPDLIRRIKYYRSRLERSVQQELAQSGSDEAFFVNDAAGSTPAGATVAVEDRSLDLLNGGSAPSVDDGLVGGAGAAEEPVAAANWLAGP---------FDGNALGSPNPSSDGASFTIWETSTSEAES--EKRCHKDASPADHGTPAAAA-TSDEQPMELKMPSSWPADPLENNRDPLGDIPLVSDDGERNLWDDILDEQLSKCPPVQPRVARRMSXXXXXXXXXXXXXXXXXXXXADGGRPSFATMSAEPVVVAGNHEHAGEEKTKEEWEEELIGQ----------ELDDGERDXXXXXXXXXXXXKKEENMPHDSSSSGLEF---DPN---APSLGLLSDALQHQYQHEEEQKEEPAAADL------------SLSRKYASLLTKACGSMVDIIQGVNV---DISLVRAVDTAAAAACAAQVAVSEAMALLDKH---------------------LATLPDDTSTRSELQ---------------------------------------GSLSPPSLSSSAA----------------------------------------------------------------------------GEAAEEARCGAET--SRLPHERGGVCCDE--------------------------------------------------HKPAQSEGG--------------------RGGGKLKPL--FSSFDVDVGAWNXXXXXXXXXXXXXGMDDDARRTQTVKDGKEGRQTGEETRFKGKWGVGSHEGCAVGGPAGCGKPWGSIVAESKLPVQWYVEQNPGNMGGSLAQLCGRIERRXXXXXXXXXAPEMEGGATSTPAPRVPSCASLSSRSXXXSSP---PSTSYTVASGSP------------------------------WALGHA---------------------QGNEESLLAMPSASAAEGAAATES-----------AVEAYRLSHSHTEMTERWPAGVLVASKALVAEVPGLEEHDRRTFEAVFERSVRRGVLGHPR 1212
            TP  + VPVPT R LRM L VLKH P GV++EVGVLLMLH ++ EVA     +AD AA    E PS L+   G  G G      + Q KQR ESA +KRRV+EAAAVLA A+ T   R  L  AG   A    K + KTRF HQLRQP  VED LQAWAATRGRE   L+E+L LSA GE   +  + A A+LVRD   RI  G+V KALPEAG VL FIS A GAV         S  ADA V+        +D PS AG        +L+      S+ AG+S             SS+ P IW S  S SD +  +   A                                  S++ SAG+ +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        A   S                  AL++ +    +L  D+       R + +      ++ + S +   V  AAG++  GA VAV   +   +      S  D  V  A A  E    +  LAGP          D     S + SSD     +W+   S  +S   ++   +AS AD      AA T  E     +M   W  DPL    D +GDIPLV++DGERN WDDIL+EQLSKC P+Q    R  +                     +GG P  AT           + H GEE      + E+ G+          E  D E++                     SSSS L +   D N   A S   L   +    Q +                        SL+  YA  L   C SM   +Q  ++   + ++  AV  A  AAC A+ AV+ A+ LLDKH                     LA    D    S+L                                        G+  P  LS S A                                                                             EAAE A   AE    R+   RGG   DE                                                  H P + E                        G  L  L  F+  DV+V  W+             G      R+     G+ G +TG    + G+       G        CGK WGSI  ES L VQW+VE+  GNMGGSLAQLC + ER+ XXXXXXX  PE+E         R  S   LS R+         PST+                                      W+   A                     + NE SLL    A +A  A+ TES           A  +YRLS  H +MT+RWPA +LV SK+L+A+VPGLEE+ RR+FE   E+SVRRG++G PR
Sbjct:  422 TPPRVRVPVPTARCLRMLLSVLKHKPTGVVQEVGVLLMLHAAAIEVAKPTPTSADGAAGHPNETPSALVPAKGDVGAGTARA--RHQVKQREESAKMKRRVDEAAAVLATAVKTSGMRT-LQGAG--VAVIAKKGSHKTRFRHQLRQPPNVEDGLQAWAATRGREVFGLRELLGLSA-GEPPIVQPAPAHAQLVRDRVARISAGKVKKALPEAGHVLEFISYAAGAVVGVMTTAGDSNEADALVD--------LDRPSTAGG------GNLLTGGKGESSVAGASL----------GTSSSDPKIWASTTSGSDAVVAAGDLANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEDSAAVSAGNIEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFTPGSLSAEDPVAWKPSMSGPAQRIEGSPRSLASHDTAAEIGSTQGSRTTSATCGGGDGGAALTVPEAPAFDLGRDVTDSCLGLRGKQDADASPLVSPASSRDDTAVA-AAGASAGGALVAVPGETTSFV----VSSFSDDAVT-APATREASGGSRQLAGPRQPLFTLAESDDEDFPS-SASSDNLVVVVWKRPKSLDDSFEPQKPRTNASGADAADALVAAETVKEDSQNGEM---WTVDPL---GDIMGDIPLVTEDGERNAWDDILEEQLSKCRPLQDHTDRSAAPPLITQRSYPDRN--------NGGSPIIATARDGST----GYTHDGEENVVLGRKNEISGRPAGLRARVRNEAGDEEQEGMMPGGYIGDDDDAASIYISYSSSSSLGYGLSDHNSIDADSCSWLVGGIPTPEQQQXXXXXXXXXXXXXXXXXXSRPMSWSLASHYAIFLDTTCRSMRSSLQDEDLGDSEAAVREAVGVAELAACEARQAVATAVDLLDKHRAQQESRSFTSSSNSPQQPPQLAPASSDIDPSSQLHRRESQAWEDNHGHRRWEEPDPANTSFVAEAPQQRSTPPGGTFRPLELSPSGAPVTGGRVRAMLRARVKGRSQDAELSGVLEQRGLDNGTQGHDAVGENGSKGGSPTGGYDNLDIYGAEATAGATREVDAEAAERAASAAEAYEQRMRTGRGGHASDEWLEARSSAIAARSIARVAAATAARATELKAASAPAXXXXXXXXXXDHHDLHLPQREEDQWEQASDRRSCRDESDGDEFIEQGNDLPSLSAFNRVDVNVADWDWSSVGGGEKISDVG------RSAGFLAGERG-ETGRGAEYLGESSAKRATGFGTATTLRCGKAWGSIACESNLSVQWHVEKRKGNMGGSLAQLCEKNERKKXXXXXXXRQPEVEENRRLKFEARQRS-GGLSPRAGLVGDGWKYPSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWSCQLANKQXXXXXXXXXXXXXXXXXXETNERSLLG--GAGSALSASGTESVQTPPLTPAALAQASYRLSDQHADMTQRWPAALLVTSKSLIADVPGLEEYGRRSFEEALEQSVRRGLMGRPR 1915          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1009.168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCE9_ECTSI5.960e-4936.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI23_9PHAE2.540e-3931.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1009contigS-firma_F_contig1009:15259..21383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1009.168.1mRNA_S-firma_F_contig1009.168.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1009 15256..21383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1009.168.1 ID=prot_S-firma_F_contig1009.168.1|Name=mRNA_S-firma_F_contig1009.168.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1218bp
MAVQTEAEPTPPRVVIVSTPVLLPVPVPTTRTLRMFLGVLKHNPAGVIRE
VGVLLMLHVSSTEVAIAADAAAAEVPSPLLSNIGCTGGGRGGRGPQPQSK
QRRESAHLKRRVEEAAAVLAVALSTEKRRVGLMAAGGVTATRLTKNNKKT
RFEHQLRQPAKVEDRLQAWAATRGREASALKEILALSAEGELGASSAGAR
LVRDLAGRIPVGQVGKALPEAGRVLGFISSATGAVAQDCANVTGSAVADA
PVEPDSFSNGTMDEPSAAGETFRPSPNDLVVSESSTSNSAGSSDQPIEDG
GFSDSRSSAAPAIWESSSSDLMPDSEQRAENAPPRLRTSDPSVISGSSSN
SAGSSDHRIEEGSPDSCSSGDPVIWDSSSSHSVEILEQRAGAASPDSRSS
GDPVIWDSSSSHSTKISEECAGDTSLDSPSSGDPVIWESSASGSSQVSAP
CVEDAPPPSLAFDKSFTWEASSTASFVSALSLCDEDYGELAPDLIRRIKY
YRSRLERSVQQELAQSGSDEAFFVNDAAGSTPAGATVAVEDRSLDLLNGG
SAPSVDDGLVGGAGAAEEPVAAANWLAGPFDGNALGSPNPSSDGASFTIW
ETSTSEAESEKRCHKDASPADHGTPAAAATSDEQPMELKMPSSWPADPLE
NNRDPLGDIPLVSDDGERNLWDDILDEQLSKCPPVQPRVARRMSSSSSSS
SSSSSSSSSSSSSQADGGRPSFATMSAEPVVVAGNHEHAGEEKTKEEWEE
ELIGQELDDGERDEGGSADEGGGEDKKEENMPHDSSSSGLEFDPNAPSLG
LLSDALQHQYQHEEEQKEEPAAADLSLSRKYASLLTKACGSMVDIIQGVN
VDISLVRAVDTAAAAACAAQVAVSEAMALLDKHLATLPDDTSTRSELQGS
LSPPSLSSSAAGEAAEEARCGAETSRLPHERGGVCCDEHKPAQSEGGRGG
GKLKPLFSSFDVDVGAWNWAGVGGGDGAGGAGMDDDARRTQTVKDGKEGR
QTGEETRFKGKWGVGSHEGCAVGGPAGCGKPWGSIVAESKLPVQWYVEQN
PGNMGGSLAQLCGRIERREERRERRRRAPEMEGGATSTPAPRVPSCASLS
SRSSASSSPPSTSYTVASGSPWALGHAQGNEESLLAMPSASAAEGAAATE
SAVEAYRLSHSHTEMTERWPAGVLVASKALVAEVPGLEEHDRRTFEAVFE
RSVRRGVLGHPRRERAG*
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