prot_S-firma_F_contig1008.152.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1008.152.1
Unique Nameprot_S-firma_F_contig1008.152.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length297
Homology
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BLAST of mRNA_S-firma_F_contig1008.152.1 vs. uniprot
Match: A0A6H5KUE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE4_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 8.670e-111
Identity = 161/183 (87.98%), Postives = 173/183 (94.54%), Query Frame = 0 
Query:    1 MINMLGGLFAFYWAAFFATRNVYILGPGGINAIAWRGSCLAVFLQTFLRPMVGSYNRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRSHFQMLVEDESGRELLFDVPPVPEYRQIQRGMQCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWGLLKERNERDR 183
            M+N LGGLFAFYWAAFFATRNVY+LGPGGINAIAWRGSCLAVFLQTFLRP+VGSYNRALELWG+GS+E RRKTKGALFTGRVT+TGFALS QAS HR+HFQMLVEDESGRELLFDVP VPEYR+I++GM CAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFW LL ++N R R
Sbjct:  110 MVNFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGSGSREERRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRRIRKGMSCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHDKNARKR 292
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BLAST of mRNA_S-firma_F_contig1008.152.1 vs. uniprot
Match: D8LS48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS48_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 4.270e-107
Identity = 155/169 (91.72%), Postives = 165/169 (97.63%), Query Frame = 0 
Query:    1 MINMLGGLFAFYWAAFFATRNVYILGPGGINAIAWRGSCLAVFLQTFLRPMVGSYNRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRSHFQMLVEDESGRELLFDVPPVPEYRQIQRGMQCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR 169
            M+N+LGGLFAFYWAAFFATRNVY+LGPGGINAIAWRGSCLAVFLQTFLRP+VGSYNRALELWGAGS+EARRKTKGALFTGRVT+TGFALS QAS HR+HFQMLVEDESGRELLFDVP VPEYR+I++GM CAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR
Sbjct:  109 MVNVLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRRIRKGMHCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR 277
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BLAST of mRNA_S-firma_F_contig1008.152.1 vs. uniprot
Match: A0A835YT15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT15_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.260e-9
Identity = 50/172 (29.07%), Postives = 85/172 (49.42%), Query Frame = 0 
Query:   13 WAAFFATRNVYILGPGGINAIAWRGSCLAVFLQTFLRPMVGSYNRALELWGAGSKEARRK-TKGALFTGRVTRTGFALSPQASKHRSHFQMLVEDESGRELLFDVPPVPEYRQIQRGMQCAVVVLSRS--SGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWGLLKERNER 181
            WA +F +   + LG    + I      +       L P + +Y +  E  G  +   +   T+ ALF+  +      ++P   K  ++ ++ V DE GR L+  VP V E  +++ GM   V+++S     GF ++ GV++AY+P +DL+VG +P L+K     LL ER  R
Sbjct:   34 WACYFTS---FFLGVAITSVIG-----VVFVFYWLLGPNLLNYRKNWEFRGKLAPSPKEPGTRAALFSASIANVVEEVNPITGK-AANLRLEVADEEGRALMLRVPAVREAARVEAGMGIEVLLISDEPGGGFEDILGVSDAYIPAIDLWVGDYPHLNKLALRRLLNERYRR 196
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1008.152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KUE4_9PHAE8.670e-11187.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS48_ECTSI4.270e-10791.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YT15_9STRA2.260e-929.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..296
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1008contigS-firma_F_contig1008:4017..6207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1008.152.1mRNA_S-firma_F_contig1008.152.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1008 3170..6762 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1008.152.1 ID=prot_S-firma_F_contig1008.152.1|Name=mRNA_S-firma_F_contig1008.152.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=297bp
MINMLGGLFAFYWAAFFATRNVYILGPGGINAIAWRGSCLAVFLQTFLRP
MVGSYNRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRSHF
QMLVEDESGRELLFDVPPVPEYRQIQRGMQCAVVVLSRSSGFYELTGVTE
AYLPELDLFVGRFPLLDKRVFWGLLKERNERDRRGRSGAVTARRKADSLS
SAAGSRARLLSSGRGASEDRADSGSGDDGYKAGMNNSYRTRPKQQQQPTQ
LQQRSVDGGGGVVARSAWRSRFQTSCPVAESSATERANLASRGCLP*
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