prot_S-firma_F_contig1004.105.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1004.105.1
Unique Nameprot_S-firma_F_contig1004.105.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length457
Homology
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE)

HSP 1 Score: 404 bits (1039), Expect = 1.280e-135
Identity = 225/324 (69.44%), Postives = 259/324 (79.94%), Query Frame = 0
Query:    1 MVKAGKRNSAAAAAFPVMVVPSKTDHQLKSLLDYGDNLEEFLAICAHLPTELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQMAKPEQLKNLIDEDALQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIAKLEKDVKDSYGVVPDIHTL---LSAEAKKTEDVANLAAAALA--AGPQTRAGLAAYPG--VAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMKAVP-KTTPVKLAADAVKLPDSD 316
            MVKAGKR+S    A P  V+P KTD+QL+SL+DYGDNL+EFLAICAHLPTELKDDL KVATL EETHRLTAELSRDQAEILE+AK KYRQM +PEQLKNLIDEDALQ++R+KR++V++ V+EKV+ITKRMYGALDTCIKNI D+EI KLEKDVK+SYG +PDI +L   + AE KKT              AGPQTRAG+AAYP   +A GVGA  +   A GA R  DL  T+EPVYCVCRQVGWGDMIGCDNEDCEHGEWFHY CVGLE VD+++  FWLCPGCS D R +EK+EQLE +A    TTPVK AA AVKLP++D
Sbjct:    1 MVKAGKRSSVGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSRQKRRKVDESVSEKVSITKRMYGALDTCIKNI-DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSANTTPVKPAA-AVKLPEND 322          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 1.940e-127
Identity = 214/311 (68.81%), Postives = 246/311 (79.10%), Query Frame = 0
Query:   14 AFPVMVVPSKTDHQLKSLLDYGDNLEEFLAICAHLPTELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQMAKPEQLKNLIDEDALQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIAKLEKDVKDSYGVVPDIHTL---LSAEAKKTEDVANLAAAALA--AGPQTRAGLAAYPG--VAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMKAVP-KTTPVKLAADAVKLPDSD 316
            A P  V+P KTD+QL+SL+DYGDNL+EFLAICAHLPTELKDDL KVATL EETHRLTAELSRDQAEILE+AK KYRQM +PEQLKNLIDEDALQ++REKR++V++ V+EKV+ITKRMYGALDTCIKNI D+EI KLEKDVK+SYG +PDI +L   + AE KKT              AGPQTRAG+AAYP   +A GVGA           R  DL  T+EPVYCVCRQVGWGDMIGCDNEDCEHGEWFHY CVGLE VD+++  FWLCPGCS D R +EK+EQLE +A    TTPVK AA AVKLP+++
Sbjct:    5 AAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNI-DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAXXXXXXXXXXVRGNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSTNTTPVKPAA-AVKLPENN 313          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A0A9NUC7_ARUDO (PHD-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUC7_ARUDO)

HSP 1 Score: 78.2 bits (191), Expect = 2.570e-14
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  227 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 279
            +EP YC+C QV +GDMI CDNE+CE GEWFHY CVGL   +   +  W CP C
Sbjct:   28 NEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 79          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A1E3PG82_9ASCO (Chromatin modification-related protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PG82_9ASCO)

HSP 1 Score: 81.6 bits (200), Expect = 9.260e-14
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  217 AARK-GDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMK 295
            A+RK   L G  + +YC CRQV +GDMIGCDNE+C++ EWFHY CVGL+   E  Q  W CP C+   +E+E K++ + K
Sbjct:  189 ASRKDSSLMGDEDEIYCFCRQVSFGDMIGCDNENCKY-EWFHYGCVGLK---EPPQGIWYCPACTKTTKEKETKKERKKK 264          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A165YBJ0_DAUCS (PHD finger protein ING n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165YBJ0_DAUCS)

HSP 1 Score: 80.9 bits (198), Expect = 1.450e-13
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0
Query:  227 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 279
            SEP+YCVC QV +GDMI CDN++C+ GEWFHY+CVGL   +   ++ W CP C
Sbjct:  197 SEPIYCVCHQVSYGDMIACDNDNCQGGEWFHYQCVGL-TPETRFKEKWYCPSC 248          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: UPI000233BD5F (PHD finger protein ING2 n=1 Tax=Glycine max TaxID=3847 RepID=UPI000233BD5F)

HSP 1 Score: 78.6 bits (192), Expect = 1.570e-13
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0
Query:  227 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 279
            +EP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL Q    + + W CP C
Sbjct:  106 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGK-WYCPTC 157          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A484LD43_9ASTE (PHD-type domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LD43_9ASTE)

HSP 1 Score: 76.3 bits (186), Expect = 2.180e-13
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  227 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 279
            +EP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   +   +  W CP C
Sbjct:   51 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGL-TPETRFKGKWYCPTC 102          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A2P2J926_RHIMU (PHD finger protein ING n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J926_RHIMU)

HSP 1 Score: 76.6 bits (187), Expect = 2.380e-13
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  227 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 279
            +EP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   +   +  W CP C
Sbjct:   61 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGL-TPETRFKGKWYCPTC 112          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A485LA62_9STRA (Inhibitor of growth protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA62_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.800e-13
Identity = 91/286 (31.82%), Postives = 128/286 (44.76%), Query Frame = 0
Query:   35 GDNLEEFLAICAHLPTELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQ------MAKP--EQLKNLIDEDA-------------LQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIA------KLEKDVKDSYGVVPDIHTLLSAEAKKTEDVANLAAAALAAGP------------QTRAGLAAYPGVAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSA 281
            G  LE++L     LP+E+K +   +  L + T  L  +L   Q++ L  A+ K RQ      + +P  E L+ L++EDA             +     KR  V Q + EKVAI  + Y  +D  I+ + D ++A      K   + +D   VV     +  A A  T  VA    +  AA P               A L A P  AA      V V  A      D    +EP+YC CR++ +G MIGCDNEDC++ EWFH+ CVGL    E+    W C  CSA
Sbjct:    2 GTYLEDYLESIYMLPSEVKRNFELMRELDKATSGLMDDLRESQSKYLRDAREKIRQRCSDTSLPEPTEEMLRALVEEDASADPDAPPDIDNPISLLMAKRHLVVQKMDEKVAIASQSYDLIDHHIRRL-DNDLANYTALLKANGEFEDEKIVVKKQKEVAPATATTTTPVATTKQSKNAATPVAVHKKSGRKRSAVDAQLEAIPEAAA------VTVPMALEDLPID---PNEPLYCHCRRISYGQMIGCDNEDCKY-EWFHFDCVGLT---EQPSGAWYCKDCSA 273          
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A022R1M1_ERYGU (PHD finger protein ING n=4 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R1M1_ERYGU)

HSP 1 Score: 79.7 bits (195), Expect = 3.390e-13
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
Query:  227 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 279
            +EP+YCVC QV +GDMI CDNE+C+ GEWFHY CVGL Q +   +  W CP C
Sbjct:  195 NEPIYCVCHQVSFGDMIACDNENCQGGEWFHYACVGLSQ-ETGLKGRWFCPTC 246          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA4_9PHAE1.280e-13569.44PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVE0_ECTSI1.940e-12768.81PHD finger protein-related n=1 Tax=Ectocarpus sili... [more]
A0A0A9NUC7_ARUDO2.570e-1458.49PHD-type domain-containing protein n=1 Tax=Arundo ... [more]
A0A1E3PG82_9ASCO9.260e-1450.00Chromatin modification-related protein n=1 Tax=Nad... [more]
A0A165YBJ0_DAUCS1.450e-1358.49PHD finger protein ING n=2 Tax=Daucus carota subsp... [more]
UPI000233BD5F1.570e-1360.38PHD finger protein ING2 n=1 Tax=Glycine max TaxID=... [more]
A0A484LD43_9ASTE2.180e-1358.49PHD-type domain-containing protein n=1 Tax=Cuscuta... [more]
A0A2P2J926_RHIMU2.380e-1358.49PHD finger protein ING n=1 Tax=Rhizophora mucronat... [more]
A0A485LA62_9STRA2.800e-1331.82Inhibitor of growth protein n=1 Tax=Aphanomyces st... [more]
A0A022R1M1_ERYGU3.390e-1360.38PHD finger protein ING n=4 Tax=Erythranthe guttata... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 231..280
e-value: 7.4E-7
score: 38.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 223..283
e-value: 2.4E-20
score: 74.2
IPR028651ING familyPANTHERPTHR10333INHIBITOR OF GROWTH PROTEINcoord: 227..290
coord: 35..178
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 229..282
score: 8.725
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 226..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1004contigS-firma_F_contig1004:7167..10959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1004.105.1mRNA_S-firma_F_contig1004.105.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1004 7121..11964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1004.105.1 ID=prot_S-firma_F_contig1004.105.1|Name=mRNA_S-firma_F_contig1004.105.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=457bp
MVKAGKRNSAAAAAFPVMVVPSKTDHQLKSLLDYGDNLEEFLAICAHLPT
ELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQMAKPEQLKNL
IDEDALQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIAKLE
KDVKDSYGVVPDIHTLLSAEAKKTEDVANLAAAALAAGPQTRAGLAAYPG
VAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDC
EHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMKAVPKT
TPVKLAADAVKLPDSDDDNDDDDDDDDKNEDGGGNAERKIGAGGSGAKAE
AASAGDGKGDKSSETPNAKDVPAVRAGDGKSGPVGAAENEPKAEGTKPPN
RGLPTSSSTAVEGAGAAAQGSRGLEEGKNGRAGEGGGQDAGVASGGVSAA
SGGPKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR028651ING_fam
IPR013083Znf_RING/FYVE/PHD
IPR001965Znf_PHD