mRNA_S-firma_F_contig1004.105.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1004.105.1
Unique NamemRNA_S-firma_F_contig1004.105.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 4.800e-131
Identity = 225/324 (69.44%), Postives = 259/324 (79.94%), Query Frame = 2 
Query:   47 MVKAGKRNSAAAAAFPVMVVPSKTDHQLKSLLDYGDNLEEFLAICAHLPTELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQMAKPEQLKNLIDEDALQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIAKLEKDVKDSYGVVPDIHTL---LSAEAKKTEDVANLAAAALA--AGPQTRAGLAAYPG--VAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMKAVP-KTTPVKLAADAVKLPDSD 994
            MVKAGKR+S    A P  V+P KTD+QL+SL+DYGDNL+EFLAICAHLPTELKDDL KVATL EETHRLTAELSRDQAEILE+AK KYRQM +PEQLKNLIDEDALQ++R+KR++V++ V+EKV+ITKRMYGALDTCIKNI D+EI KLEKDVK+SYG +PDI +L   + AE KKT              AGPQTRAG+AAYP   +A GVGA  +   A GA R  DL  T+EPVYCVCRQVGWGDMIGCDNEDCEHGEWFHY CVGLE VD+++  FWLCPGCS D R +EK+EQLE +A    TTPVK AA AVKLP++D
Sbjct:    1 MVKAGKRSSVGPIAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSRQKRRKVDESVSEKVSITKRMYGALDTCIKNI-DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSANTTPVKPAA-AVKLPEND 322
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 7.940e-123
Identity = 214/311 (68.81%), Postives = 246/311 (79.10%), Query Frame = 2 
Query:   86 AFPVMVVPSKTDHQLKSLLDYGDNLEEFLAICAHLPTELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQMAKPEQLKNLIDEDALQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIAKLEKDVKDSYGVVPDIHTL---LSAEAKKTEDVANLAAAALA--AGPQTRAGLAAYPG--VAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMKAVP-KTTPVKLAADAVKLPDSD 994
            A P  V+P KTD+QL+SL+DYGDNL+EFLAICAHLPTELKDDL KVATL EETHRLTAELSRDQAEILE+AK KYRQM +PEQLKNLIDEDALQ++REKR++V++ V+EKV+ITKRMYGALDTCIKNI D+EI KLEKDVK+SYG +PDI +L   + AE KKT              AGPQTRAG+AAYP   +A GVGA           R  DL  T+EPVYCVCRQVGWGDMIGCDNEDCEHGEWFHY CVGLE VD+++  FWLCPGCS D R +EK+EQLE +A    TTPVK AA AVKLP+++
Sbjct:    5 AAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNI-DDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAXXXXXXXXXXVRGNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSTNTTPVKPAA-AVKLPENN 313
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A6H5KU43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU43_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.580e-20
Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 3 
Query: 1530 DGNLILPAHNTAKPTEEHPSCSIGGTVPVERGGDGSWRLCKWALPFVANGKIVSAITHRARFNGAGQRYRGKKRAQK 1760
            DG LILP HNT  P  +HP+C IGGTVPVE+  +GSWRLC WALP+V+ G++V  ITH AR N A Q+ RGKKRA K
Sbjct:  479 DGCLILPPHNTNNPGGKHPTCQIGGTVPVEK-VNGSWRLCSWALPYVSTGRVVQKITHNARHNNAPQKSRGKKRALK 554
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A0A9NUC7_ARUDO (PHD-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUC7_ARUDO)

HSP 1 Score: 78.2 bits (191), Expect = 4.920e-14
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 2 
Query:  725 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 883
            +EP YC+C QV +GDMI CDNE+CE GEWFHY CVGL   +   +  W CP C
Sbjct:   28 NEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 79
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A1E3PG82_9ASCO (Chromatin modification-related protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PG82_9ASCO)

HSP 1 Score: 81.6 bits (200), Expect = 2.230e-13
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 2 
Query:  695 AARK-GDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMK 931
            A+RK   L G  + +YC CRQV +GDMIGCDNE+C++ EWFHY CVGL+   E  Q  W CP C+   +E+E K++ + K
Sbjct:  189 ASRKDSSLMGDEDEIYCFCRQVSFGDMIGCDNENCKY-EWFHYGCVGLK---EPPQGIWYCPACTKTTKEKETKKERKKK 264
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: UPI000233BD5F (PHD finger protein ING2 n=1 Tax=Glycine max TaxID=3847 RepID=UPI000233BD5F)

HSP 1 Score: 78.6 bits (192), Expect = 3.270e-13
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 2 
Query:  725 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 883
            +EP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL Q    + + W CP C
Sbjct:  106 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGK-WYCPTC 157
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A165YBJ0_DAUCS (PHD finger protein ING n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165YBJ0_DAUCS)

HSP 1 Score: 80.9 bits (198), Expect = 3.420e-13
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 2 
Query:  725 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 883
            SEP+YCVC QV +GDMI CDN++C+ GEWFHY+CVGL   +   ++ W CP C
Sbjct:  197 SEPIYCVCHQVSYGDMIACDNDNCQGGEWFHYQCVGL-TPETRFKEKWYCPSC 248
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A484LD43_9ASTE (PHD-type domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LD43_9ASTE)

HSP 1 Score: 76.3 bits (186), Expect = 4.210e-13
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 2 
Query:  725 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 883
            +EP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   +   +  W CP C
Sbjct:   51 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGL-TPETRFKGKWYCPTC 102
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A2P2J926_RHIMU (PHD finger protein ING n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J926_RHIMU)

HSP 1 Score: 76.6 bits (187), Expect = 4.660e-13
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 2 
Query:  725 SEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGC 883
            +EP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL   +   +  W CP C
Sbjct:   61 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGL-TPETRFKGKWYCPTC 112
[Close]
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Match: A0A485LA62_9STRA (Inhibitor of growth protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA62_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.780e-13
Identity = 91/286 (31.82%), Postives = 128/286 (44.76%), Query Frame = 2 
Query:  149 GDNLEEFLAICAHLPTELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQ------MAKP--EQLKNLIDEDA-------------LQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIA------KLEKDVKDSYGVVPDIHTLLSAEAKKTEDVANLAAAALAAGP------------QTRAGLAAYPGVAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYKCVGLEQVDEEQQQFWLCPGCSA 889
            G  LE++L     LP+E+K +   +  L + T  L  +L   Q++ L  A+ K RQ      + +P  E L+ L++EDA             +     KR  V Q + EKVAI  + Y  +D  I+ + D ++A      K   + +D   VV     +  A A  T  VA    +  AA P               A L A P  AA      V V  A      D    +EP+YC CR++ +G MIGCDNEDC++ EWFH+ CVGL    E+    W C  CSA
Sbjct:    2 GTYLEDYLESIYMLPSEVKRNFELMRELDKATSGLMDDLRESQSKYLRDAREKIRQRCSDTSLPEPTEEMLRALVEEDASADPDAPPDIDNPISLLMAKRHLVVQKMDEKVAIASQSYDLIDHHIRRL-DNDLANYTALLKANGEFEDEKIVVKKQKEVAPATATTTTPVATTKQSKNAATPVAVHKKSGRKRSAVDAQLEAIPEAAA------VTVPMALEDLPID---PNEPLYCHCRRISYGQMIGCDNEDCKY-EWFHFDCVGLT---EQPSGAWYCKDCSA 273
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1004.105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA4_9PHAE4.800e-13169.44PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVE0_ECTSI7.940e-12368.81PHD finger protein-related n=1 Tax=Ectocarpus sili... [more]
A0A6H5KU43_9PHAE1.580e-2063.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0A9NUC7_ARUDO4.920e-1458.49PHD-type domain-containing protein n=1 Tax=Arundo ... [more]
A0A1E3PG82_9ASCO2.230e-1350.00Chromatin modification-related protein n=1 Tax=Nad... [more]
UPI000233BD5F3.270e-1360.38PHD finger protein ING2 n=1 Tax=Glycine max TaxID=... [more]
A0A165YBJ0_DAUCS3.420e-1358.49PHD finger protein ING n=2 Tax=Daucus carota subsp... [more]
A0A484LD43_9ASTE4.210e-1358.49PHD-type domain-containing protein n=1 Tax=Cuscuta... [more]
A0A2P2J926_RHIMU4.660e-1358.49PHD finger protein ING n=1 Tax=Rhizophora mucronat... [more]
A0A485LA62_9STRA6.780e-1331.82Inhibitor of growth protein n=1 Tax=Aphanomyces st... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1004contigS-firma_F_contig1004:7121..11964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FVE0
PFAMsING,PHD
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00021,RC00043,RC03180
KEGG koko:K00927,ko:K07561,ko:K11319,ko:K11346,ko:K11379,ko:K19197,ko:K19198
KEGG ReactionR01512,R10455
KEGG Pathwayko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
Evalue3.18e-128
EggNOG OGsCOG5034@1|root,KOG1973@2759|Eukaryota
EC2.5.1.108,2.7.2.3
Descriptionmethylated histone binding
COG categoryB
BRITEko00000,ko00001,ko00002,ko01000,ko03012,ko03036,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPHD-type zinc finger and ING domain protein
Ec32 orthologEc-14_000760.1
Exons7
Model size2422
Cds size1371
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815528.2361-UTR-S-firma_F_contig1004:7120..71661622815528.2361-UTR-S-firma_F_contig1004:7120..7166Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1004 7121..7166 +
1696949390.7224417-UTR-S-firma_F_contig1004:7120..71661696949390.7224417-UTR-S-firma_F_contig1004:7120..7166Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1004 7121..7166 +
1622815528.3429496-UTR-S-firma_F_contig1004:10959..119641622815528.3429496-UTR-S-firma_F_contig1004:10959..11964Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1004 10960..11964 +
1696949390.897011-UTR-S-firma_F_contig1004:10959..119641696949390.897011-UTR-S-firma_F_contig1004:10959..11964Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1004 10960..11964 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815528.2521417-CDS-S-firma_F_contig1004:7166..72831622815528.2521417-CDS-S-firma_F_contig1004:7166..7283Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 7167..7283 +
1696949390.7395105-CDS-S-firma_F_contig1004:7166..72831696949390.7395105-CDS-S-firma_F_contig1004:7166..7283Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 7167..7283 +
1622815528.2642725-CDS-S-firma_F_contig1004:8239..83921622815528.2642725-CDS-S-firma_F_contig1004:8239..8392Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 8240..8392 +
1696949390.749637-CDS-S-firma_F_contig1004:8239..83921696949390.749637-CDS-S-firma_F_contig1004:8239..8392Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 8240..8392 +
1622815528.276032-CDS-S-firma_F_contig1004:8643..87971622815528.276032-CDS-S-firma_F_contig1004:8643..8797Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 8644..8797 +
1696949390.7807677-CDS-S-firma_F_contig1004:8643..87971696949390.7807677-CDS-S-firma_F_contig1004:8643..8797Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 8644..8797 +
1622815528.286775-CDS-S-firma_F_contig1004:8985..90711622815528.286775-CDS-S-firma_F_contig1004:8985..9071Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 8986..9071 +
1696949390.802344-CDS-S-firma_F_contig1004:8985..90711696949390.802344-CDS-S-firma_F_contig1004:8985..9071Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 8986..9071 +
1622815528.2987661-CDS-S-firma_F_contig1004:9405..96211622815528.2987661-CDS-S-firma_F_contig1004:9405..9621Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 9406..9621 +
1696949390.8307178-CDS-S-firma_F_contig1004:9405..96211696949390.8307178-CDS-S-firma_F_contig1004:9405..9621Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 9406..9621 +
1622815528.314159-CDS-S-firma_F_contig1004:10145..102171622815528.314159-CDS-S-firma_F_contig1004:10145..10217Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 10146..10217 +
1696949390.846261-CDS-S-firma_F_contig1004:10145..102171696949390.846261-CDS-S-firma_F_contig1004:10145..10217Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 10146..10217 +
1622815528.3284101-CDS-S-firma_F_contig1004:10386..109591622815528.3284101-CDS-S-firma_F_contig1004:10386..10959Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 10387..10959 +
1696949390.8864942-CDS-S-firma_F_contig1004:10386..109591696949390.8864942-CDS-S-firma_F_contig1004:10386..10959Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1004 10387..10959 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1004.105.1prot_S-firma_F_contig1004.105.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1004 7167..10959 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1004.105.1

>prot_S-firma_F_contig1004.105.1 ID=prot_S-firma_F_contig1004.105.1|Name=mRNA_S-firma_F_contig1004.105.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=457bp
MVKAGKRNSAAAAAFPVMVVPSKTDHQLKSLLDYGDNLEEFLAICAHLPT
ELKDDLNKVATLGEETHRLTAELSRDQAEILEKAKLKYRQMAKPEQLKNL
IDEDALQRAREKRQRVEQGVTEKVAITKRMYGALDTCIKNIADEEIAKLE
KDVKDSYGVVPDIHTLLSAEAKKTEDVANLAAAALAAGPQTRAGLAAYPG
VAAGVGAIGVGVGAAGAARKGDLGGTSEPVYCVCRQVGWGDMIGCDNEDC
EHGEWFHYKCVGLEQVDEEQQQFWLCPGCSADKREREKKEQLEMKAVPKT
TPVKLAADAVKLPDSDDDNDDDDDDDDKNEDGGGNAERKIGAGGSGAKAE
AASAGDGKGDKSSETPNAKDVPAVRAGDGKSGPVGAAENEPKAEGTKPPN
RGLPTSSSTAVEGAGAAAQGSRGLEEGKNGRAGEGGGQDAGVASGGVSAA
SGGPKA*
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mRNA from alignment at S-firma_F_contig1004:7121..11964+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1004.105.1 ID=mRNA_S-firma_F_contig1004.105.1|Name=mRNA_S-firma_F_contig1004.105.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4844bp|location=Sequence derived from alignment at S-firma_F_contig1004:7121..11964+ (Sphaerotrichia firma ET2_F female)
AGGCCCTCTGTTCGAGGCTCGAGGCACGGGAACAGGCAGGTACAACATGG
TAAAGGCTGGAAAACGAAACAGTGCTGCGGCCGCCGCGTTTCCTGTGATG
GTGGTTCCGTCAAAGACCGACCATCAACTCAAATCACTCTTGGACTACGG
AGACAACTTGGAGGTGTGATGGAATCGTTACCTGGCCGTTGTGCTGCCGT
GATCGATACTGACGATTGAGTTACTCTCCCTATTTTGCGGTACATTGCGT
GTAGGCTTGCCCTCTCGAGATGCGTCGAGTTCGTTCACCACTTTTCTACG
TACGCCCTCGTTGCGCGGAAGATGCCAACGGTTGTGAAGGAACCAGGAAC
TAGCAGAAAACAGCGACCGAGTCTGTTGGGGATGCAAAAGCCCTGCTGGA
AAGGTAGTTCGACATCGATGTTCCTGTACTATACGAGCGTGGGTGTCTGG
TGCATGGATCGCAGAGTTTGCAGCAGGGTTTGGCACGATGGCCTCGTTGA
TCGTGCGCCTTAGCTTGCGGTACCCTTTTGTGGTCTCAGGAAAAATGGCT
GCTGGTGTTTTGAAAAGATTTGTCACAAAATTTGAAATTCGGAGAGAGCC
AGCCTTGCTCGACGGCAGCTACAGAGCATGTTCTCTTCCTCTCATCTCGA
ATGGGTGGGGTCGTGGGTAGTTCGTTGGAAGACCGCTGACGTACGGTAGT
TTCGTTACGAATTCCATTCGTTTTGTTTTCTTTGCCGTTACTCTGGGGCT
AAGACACAGTTACAGTTGGCAGCTGGCTGGAGCAAAAAGCAAAAAGGGTT
GTCGCCTGGTCTTACTAACAGAAGTAGTGATTCCAAGTGTCAAGGTATCC
CGCGTGATCGGGGTATTTGTTGCCAACCGCCAGTCTAGTTGAGCGTGTTG
TGTGTGTGCGTGTTTTGCAAGCTTGCACTCCAGGTATCAATCTTGAGGCA
AACATATTCTAATGTACTCTGTGGATGGGAAGTAACGTCTGTTTTGCGCT
CCTCCTTTCAGGTGGCAAGCACCATGCCCCGCAACATCCGTGTTCCTGTG
GCGTTGCTGTAATTCGAACTGCGTTTTTTTTAATTGTCCATGTTCTCGCC
GTCTACCTGCGGAGTGCAGGAGTTCTTGGCCATCTGTGCCCACCTTCCGA
CCGAGCTGAAGGACGACCTCAATAAAGTCGCCACGCTAGGCGAAGAGACG
CACCGCCTCACGGCGGAGCTGAGCAGAGATCAGGCAGAGATTCTGGAGAA
GGCCAAGCTCAAATACAGACAAGTGTGTGTACCTCATTGTTAGCTCTGAT
GTATACATATGCAGCGAATAGTCTCGATAAGCGCTGGGGCTTGCGTGCGC
TTCCTCGGGGCACGACTTGTGTGTTACCTTGTGTTCGCGAGAGGTTCAGC
CGTTGATTTTTACAGTAGTTGAACGCCCTCCAAGCCTGTCCCACCTCACA
ACAACCCCCTTTTCCCCGGCTGGGATATGATTGTTGTACAATCTTTATAT
TTTGACCTTCTCACGGTTTTCAGATGGCGAAACCCGAACAGCTGAAGAAC
CTCATAGACGAGGACGCCCTCCAGAGGGCGAGAGAGAAACGACAGAGGGT
GGAGCAGGGTGTGACCGAGAAGGTAGCAATCACCAAGAGGATGTACGGCG
CGCTAGACACCTGCATCAAGAACATCGGTGAGCGAGGCGCCGTTTTTCGC
GCGTTGACAGATTTGCTTTGTATAGAAATTATTTTGTTATTTTAGCTTGC
TGAGCGCATCTTTGCGCACCTCACTTGTAGCACACCCTTATACGCGAACA
TTCTGAAAGCCTTGCGGTCGTCCATCCCGCCCGCCGCTGCCTTGCACACC
GATACATGGGGTGAGCAGACGAAGAGATCGCCAAGCTGGAGAAGGACGTA
AAAGACAGCTATGGCGTCGTCCCGGATATCCATACTCTTTTGTCTGCAGA
GGTGAAGTTCGTTGGGGTCCTACCGTGCCATCCTTTTACTTGTACCGGAG
AGTGGTGGGCCGTTAGATCGTGCTGCACAAGGCCATGACCACGCAGGCGG
CACAGGAATTACGCCCGGGCTTGCCTTTGTGTACAGATCACCATCGTGGT
GCCATCCCGGGGGAGGCCTCATCTGTAGGGTTAGTTCGATGTGCTGGGCT
AGCAACCGATTCGTTTCATGCTTACTCTCGATGCCACCAAGAAACGCCTG
TAGATCGTGAACCATGCCCGGAAAACCTGGCGGCACAATTAATGTAGTAC
TTCGCTTACAGTGTCTATTGTTGCTCCAATGTCAGGCTAAGAAGACGGAG
GATGTCGCAAACTTAGCAGCAGCCGCCCTTGCAGCTGGACCACAGACAAG
GGCAGGGTTGGCGGCGTACCCGGGTGTGGCAGCGGGTGTGGGAGCGATTG
GAGTAGGAGTGGGGGCTGCCGGGGCGGCGAGGAAAGGCGACCTTGGCGGC
ACCAGCGAGCCTGTTTATTGTGTTTGTCGTCAAGTTGGCTGGGGAGATAT
GGTGAGAACAAGCTTGCAACAGCGTACATATCCTGTTTTGTTGTTTTGTT
CTCTGCGTGTACATAATTGTTCTTCCTTCGATGTTGTGTGCCCTTTTATT
CAATTGGACCCCCATAACTGTTCTGGTCTGAAGACGTATTGCGCCGAAAC
AACGCCCTCTCGCGATAGTATAGGGTCGTTTGGATTGGATTAGACAGATT
GTGCTCCTTCTGGTCTCGCGTGAGGCATACAAAACACAACAACCGATCGC
GTGCGACCGTTAAGTTGAGTACCGACGCAGACAGGCCCGGTGTTGCTGAG
AAATGATCTTGAACGCGGCTACGGGGAACGGTCAGAGGGGTCTATCTATC
TTTCCCTCGATTGCTGCTTCACTGTTAGCGTGGACGCCGGGGTTGTGCGC
TCTGTCTCCTTCCTCCACCTTCACCCTCATCCGAGCATGATACAAAATGG
GCGCCCTTGGTATACCCCTGGTGATTTGTGTGCTCCCGGTGTCTCGTATC
CGTCTTACCCTGCGGCTTGCGACAGATTGGCTGCGACAACGAAGACTGCG
AGCACGGAGAGTGGTTCCACTACAAGTGTGTTGGCCTGGAGCAAGTGGTG
AGTTTTCCCTACAAGTACAGCAAATAAAAGTGACTCAACGTTCGAAGCAG
GCAGACTACCGTAATTTACGTCATTCTGGCAAATCCACGTTGTTGGCTTA
AGGCTTGTCGACCACCTGACGCTGACAAAACCACCTGACCCCGTGTCGTT
TTTTTCACCGCAACAGGACGAAGAGCAGCAGCAGTTTTGGCTATGCCCGG
GCTGCTCCGCCGACAAAAGAGAGAGGGAAAAGAAGGAGCAGTTAGAGATG
AAGGCCGTGCCCAAGACCACCCCCGTGAAGCTGGCTGCTGATGCCGTCAA
GTTGCCGGACTCGGACGACGACAACGATGACGATGACGACGACGACGACA
AGAACGAAGACGGGGGTGGGAACGCTGAGAGAAAGATTGGAGCGGGGGGG
TCAGGTGCGAAGGCTGAGGCGGCCTCCGCCGGAGACGGAAAGGGTGACAA
ATCCAGTGAAACGCCGAACGCAAAAGACGTTCCGGCTGTCCGGGCAGGGG
ACGGGAAGAGCGGGCCGGTTGGAGCCGCAGAAAATGAGCCGAAGGCAGAG
GGAACCAAACCGCCGAACAGAGGTTTGCCAACGTCGAGCAGCACTGCTGT
CGAAGGGGCTGGCGCGGCTGCACAAGGATCGCGGGGGTTAGAAGAAGGGA
AGAATGGTAGGGCGGGAGAAGGTGGCGGTCAAGACGCAGGGGTTGCCTCG
GGAGGAGTTTCCGCAGCTTCGGGTGGTCCAAAGGCTTGATGAGCAGGGTG
TTTGCCGGTAAAAACGGTTGCGGGGACGGGCCAATCACCTTGGACGGGTG
CAATACCCCCAACTTCGGTGAGGCGGGTGTGACGAAGGGCAAAAGCTCGT
GGACGGAAACCTTATCCTCCCCGCCCACAACACCGCCAAACCTACCGAGG
AGCACCCCAGCTGCTCGATCGGTGGGACTGTGCCCGTGGAGCGTGGCGGG
GACGGATCGTGGCGATTGTGCAAGTGGGCGCTTCCGTTCGTTGCCAACGG
GAAGATCGTGTCCGCAATCACGCACAGAGCACGCTTCAACGGCGCCGGCC
AGAGGTACCGCGGCAAGAAGAGGGCGCAGAAGTGATAGGGTTGCCGTGTC
CTCCATGTAAATGCTGCATTTCAGAATGTAGGATACTGTCACTACATATT
GGATCACGTTATCAGATGGACGGCGAAAGGATGTGGGTGATACCGAGGTC
TCAACTCCGCGGTGGACCGTGATGTGATGGCAACTACCAGAAGTTCTTTG
GCTTTTTTGGCACTACCTTCGCTTCTGTGCACGAGTCGCCACACTTTAAC
GAACGTTTGCTTGTCACTTTTTCACTCATAGTTTTCAGCTCGCAAGTTCA
GGCAAAGCGGCGGTTTGGAAGGGGATGCGACGTTGCTGTCTATTGCGTAG
GTTGTGCTTTTTGTCACGGGTTGCCTGTTGGTCGCACATTCACGCGCGAG
TCAGCGAGGGGGTCTGTCTGATGAGTTAGACGCGCCCCTTTCACTTTTAA
ACGGCACGGCATGCTGCTCCTGAGCAGGTGAACTGTACTTGAAGGGATAG
GTTCCTTGGATTACAAACCAGTGTAAGAATGAGGTTCATGCGTGGGGGTA
AATCGTAGTGATGGATTTCTGTACCATGTGAAATCAACACAACAACGAAA
CCGCCACTTAGCCTGCGCAGCGACTAGCTGGCTCCACCGAGCTGGTTGTA
CGCTTCTATGTTCCCAGGATTTAGGGTCGAATCCGTGATTTTCA
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Coding sequence (CDS) from alignment at S-firma_F_contig1004:7121..11964+

>mRNA_S-firma_F_contig1004.105.1 ID=mRNA_S-firma_F_contig1004.105.1|Name=mRNA_S-firma_F_contig1004.105.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2742bp|location=Sequence derived from alignment at S-firma_F_contig1004:7121..11964+ (Sphaerotrichia firma ET2_F female)
ATGGTAAAGGCTGGAAAACGAAACAGTGCTGCGGCCGCCGCGTTTCCTGT
GATGGTGGTTCCGTCAAAGACCGACCATCAACTCAAATCACTCTTGGACT
ACGGAGACAACTTGGAGATGGTAAAGGCTGGAAAACGAAACAGTGCTGCG
GCCGCCGCGTTTCCTGTGATGGTGGTTCCGTCAAAGACCGACCATCAACT
CAAATCACTCTTGGACTACGGAGACAACTTGGAGGAGTTCTTGGCCATCT
GTGCCCACCTTCCGACCGAGCTGAAGGACGACCTCAATAAAGTCGCCACG
CTAGGCGAAGAGACGCACCGCCTCACGGCGGAGCTGAGCAGAGATCAGGC
AGAGATTCTGGAGAAGGCCAAGCTCAAATACAGACAAGAGTTCTTGGCCA
TCTGTGCCCACCTTCCGACCGAGCTGAAGGACGACCTCAATAAAGTCGCC
ACGCTAGGCGAAGAGACGCACCGCCTCACGGCGGAGCTGAGCAGAGATCA
GGCAGAGATTCTGGAGAAGGCCAAGCTCAAATACAGACAAATGGCGAAAC
CCGAACAGCTGAAGAACCTCATAGACGAGGACGCCCTCCAGAGGGCGAGA
GAGAAACGACAGAGGGTGGAGCAGGGTGTGACCGAGAAGGTAGCAATCAC
CAAGAGGATGTACGGCGCGCTAGACACCTGCATCAAGAACATCGATGGCG
AAACCCGAACAGCTGAAGAACCTCATAGACGAGGACGCCCTCCAGAGGGC
GAGAGAGAAACGACAGAGGGTGGAGCAGGGTGTGACCGAGAAGGTAGCAA
TCACCAAGAGGATGTACGGCGCGCTAGACACCTGCATCAAGAACATCGCA
GACGAAGAGATCGCCAAGCTGGAGAAGGACGTAAAAGACAGCTATGGCGT
CGTCCCGGATATCCATACTCTTTTGTCTGCAGAGCAGACGAAGAGATCGC
CAAGCTGGAGAAGGACGTAAAAGACAGCTATGGCGTCGTCCCGGATATCC
ATACTCTTTTGTCTGCAGAGGCTAAGAAGACGGAGGATGTCGCAAACTTA
GCAGCAGCCGCCCTTGCAGCTGGACCACAGACAAGGGCAGGGTTGGCGGC
GTACCCGGGTGTGGCAGCGGGTGTGGGAGCGATTGGAGTAGGAGTGGGGG
CTGCCGGGGCGGCGAGGAAAGGCGACCTTGGCGGCACCAGCGAGCCTGTT
TATTGTGTTTGTCGTCAAGTTGGCTGGGGAGATATGGCTAAGAAGACGGA
GGATGTCGCAAACTTAGCAGCAGCCGCCCTTGCAGCTGGACCACAGACAA
GGGCAGGGTTGGCGGCGTACCCGGGTGTGGCAGCGGGTGTGGGAGCGATT
GGAGTAGGAGTGGGGGCTGCCGGGGCGGCGAGGAAAGGCGACCTTGGCGG
CACCAGCGAGCCTGTTTATTGTGTTTGTCGTCAAGTTGGCTGGGGAGATA
TGATTGGCTGCGACAACGAAGACTGCGAGCACGGAGAGTGGTTCCACTAC
AAGTGTGTTGGCCTGGAGCAAGTGATTGGCTGCGACAACGAAGACTGCGA
GCACGGAGAGTGGTTCCACTACAAGTGTGTTGGCCTGGAGCAAGTGGACG
AAGAGCAGCAGCAGTTTTGGCTATGCCCGGGCTGCTCCGCCGACAAAAGA
GAGAGGGAAAAGAAGGAGCAGTTAGAGATGAAGGCCGTGCCCAAGACCAC
CCCCGTGAAGCTGGCTGCTGATGCCGTCAAGTTGCCGGACTCGGACGACG
ACAACGATGACGATGACGACGACGACGACAAGAACGAAGACGGGGGTGGG
AACGCTGAGAGAAAGATTGGAGCGGGGGGGTCAGGTGCGAAGGCTGAGGC
GGCCTCCGCCGGAGACGGAAAGGGTGACAAATCCAGTGAAACGCCGAACG
CAAAAGACGTTCCGGCTGTCCGGGCAGGGGACGGGAAGAGCGGGCCGGTT
GGAGCCGCAGAAAATGAGCCGAAGGCAGAGGGAACCAAACCGCCGAACAG
AGGTTTGCCAACGTCGAGCAGCACTGCTGTCGAAGGGGCTGGCGCGGCTG
CACAAGGATCGCGGGGGTTAGAAGAAGGGAAGAATGGTAGGGCGGGAGAA
GGTGGCGGTCAAGACGCAGGGGTTGCCTCGGGAGGAGTTTCCGCAGCTTC
GGGTGGTCCAAAGGCTTGAGACGAAGAGCAGCAGCAGTTTTGGCTATGCC
CGGGCTGCTCCGCCGACAAAAGAGAGAGGGAAAAGAAGGAGCAGTTAGAG
ATGAAGGCCGTGCCCAAGACCACCCCCGTGAAGCTGGCTGCTGATGCCGT
CAAGTTGCCGGACTCGGACGACGACAACGATGACGATGACGACGACGACG
ACAAGAACGAAGACGGGGGTGGGAACGCTGAGAGAAAGATTGGAGCGGGG
GGGTCAGGTGCGAAGGCTGAGGCGGCCTCCGCCGGAGACGGAAAGGGTGA
CAAATCCAGTGAAACGCCGAACGCAAAAGACGTTCCGGCTGTCCGGGCAG
GGGACGGGAAGAGCGGGCCGGTTGGAGCCGCAGAAAATGAGCCGAAGGCA
GAGGGAACCAAACCGCCGAACAGAGGTTTGCCAACGTCGAGCAGCACTGC
TGTCGAAGGGGCTGGCGCGGCTGCACAAGGATCGCGGGGGTTAGAAGAAG
GGAAGAATGGTAGGGCGGGAGAAGGTGGCGGTCAAGACGCAGGGGTTGCC
TCGGGAGGAGTTTCCGCAGCTTCGGGTGGTCCAAAGGCTTGA
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