prot_S-firma_F_contig10002.66.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_F_contig10002.66.1
Unique Name	prot_S-firma_F_contig10002.66.1
Type	polypeptide
Organism	Sphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length	299

Homology

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BLAST of mRNA_S-firma_F_contig10002.66.1 vs. uniprot
Match: A0A6H5KH57_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH57_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 8.110e-84
Identity = 187/291 (64.26%), Postives = 215/291 (73.88%), Query Frame = 0

Query:    1 AKEAEALELSEECDTLSAELERAGAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKATEAQLRHRLTSQVAEAENLRQELMDTRERLDQAEAAVRASEQRAREGADEKTKKLLLEMENLCQEKLLAENKAGDMEEELVQLRNEVATAEQTAARDQSLIIKATEERIAVLDQAAEEKDVAIAELQAALDTARLSASSASPEIAAADAKTAIEAATEVFNAEIAALTAAVDEYKETIKKQDARIKKLEQVRLTNGQVEKLQAMKASAKKTAAENAELKQRLALLKERLE 291
            A EA + ELS+EC+  SAE+E     A                             AAGKATE QLRHRLTSQVAEAENLRQELMDTRER D+AEAAVRAS+QRARE ADEKTK LL EMENLCQEKL+AENKAG+ME EL +LR  VATAEQTAA+DQ ++I+A EER+AVLDQAA++KD+AIA+LQA+LD AR SA++ S               T   N ++AALTAA DE KETI +QDARIKKLEQVRLTNGQVEKLQAMKASA++TAAEN ELKQRL++LKERLE
Sbjct: 2210 AMEAASKELSKECEARSAEVESVRKSAAEVAEELDVARGRKEDLERELADNV----AAGKATEQQLRHRLTSQVAEAENLRQELMDTRERSDRAEAAVRASDQRARESADEKTKGLLAEMENLCQEKLIAENKAGEMEAELSRLREAVATAEQTAAKDQGMLIRAAEERMAVLDQAAQDKDIAIAKLQASLDAARASAAAESXXXXXXX----XXXXTAALNDKVAALTAATDEQKETIARQDARIKKLEQVRLTNGQVEKLQAMKASARRTAAENTELKQRLSVLKERLE 2492

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_F_contig10002.66.1 vs. uniprot

BLAST of mRNA_S-firma_F_contig10002.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KH57_9PHAE	8.110e-84	64.26	Kinesin motor domain-containing protein n=2 Tax=Ec...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 6..26
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	COILS	Coil	Coil	coord: 31..58
None	No IPR available	COILS	Coil	Coil	coord: 63..111
None	No IPR available	COILS	Coil	Coil	coord: 225..252
None	No IPR available	COILS	Coil	Coil	coord: 120..161
None	No IPR available	COILS	Coil	Coil	coord: 262..296

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_F_contig10002	contig	S-firma_F_contig10002:1913..4478 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_F_contig10002.66.1	mRNA_S-firma_F_contig10002.66.1	Sphaerotrichia firma ET2_F female	mRNA	S-firma_F_contig10002 1911..4478 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_F_contig10002.66.1 ID=prot_S-firma_F_contig10002.66.1|Name=mRNA_S-firma_F_contig10002.66.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=299bp
AKEAEALELSEECDTLSAELERAGAEAGAAAGGLEEKLRAAEEAREAVEE
ALSEAVAAGKATEAQLRHRLTSQVAEAENLRQELMDTRERLDQAEAAVRA
SEQRAREGADEKTKKLLLEMENLCQEKLLAENKAGDMEEELVQLRNEVAT
AEQTAARDQSLIIKATEERIAVLDQAAEEKDVAIAELQAALDTARLSASS
ASPEIAAADAKTAIEAATEVFNAEIAALTAAVDEYKETIKKQDARIKKLE
QVRLTNGQVEKLQAMKASAKKTAAENAELKQRLALLKERLELKQRLEAT