prot_S-firma_F_contig1000.60.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1000.60.1
Unique Nameprot_S-firma_F_contig1000.60.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length145
Homology
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BLAST of mRNA_S-firma_F_contig1000.60.1 vs. uniprot
Match: A0A6H5K0W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W7_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 5.400e-20
Identity = 69/116 (59.48%), Postives = 85/116 (73.28%), Query Frame = 0 
Query:   30 EASEELRRELERGQREAEQLRSRLQVSGDLAADEASRAKEAFQAERAVRSKLASSAEREEQLRSENAGLSAKVETLRATLAKLSTDLAETSKLSQDRLVDSEVSSRAAAAAERRSE 145
            E SE LR  L+R Q E E+LR+RL+ +  LAADEA +AKE+ +AE   RS+LA S EREE L+SENA L  + E LR TLA LS +L  +SKLSQDRL+  EVS+RAAA AERRS+
Sbjct:  230 EVSEGLRAALQRSQGETERLRARLETAVGLAADEAGKAKESSRAEELSRSQLAVSGEREENLQSENASLRNENEGLRRTLASLSAELEASSKLSQDRLIKCEVSARAAAEAERRSD 345
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BLAST of mRNA_S-firma_F_contig1000.60.1 vs. uniprot
Match: D7FH76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH76_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.350e-9
Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 0 
Query:    1 RGLLEDRDARLEKAERDAAASSQGSERCKEASEELRRELERGQREAEQLRSRLQVSGDLAADEASRAKEAFQAE 74
            RG L DR+A L++AER+ AA+ + SER +E SE LR  L+R Q EAE+LR+RL+ + +LAADEA +AKE+ +AE
Sbjct:  548 RGFLADREASLDRAERELAAARETSERGEEVSEGLRSALQRSQGEAERLRARLETAVELAADEAGKAKESSRAE 621
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1000.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0W7_9PHAE5.400e-2059.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH76_ECTSI2.350e-955.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..52
NoneNo IPR availableCOILSCoilCoilcoord: 88..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1000contigS-firma_F_contig1000:24192..26243 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1000.60.1mRNA_S-firma_F_contig1000.60.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1000 24192..26243 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1000.60.1 ID=prot_S-firma_F_contig1000.60.1|Name=mRNA_S-firma_F_contig1000.60.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=145bp
RGLLEDRDARLEKAERDAAASSQGSERCKEASEELRRELERGQREAEQLR
SRLQVSGDLAADEASRAKEAFQAERAVRSKLASSAEREEQLRSENAGLSA
KVETLRATLAKLSTDLAETSKLSQDRLVDSEVSSRAAAAAERRSE
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