Homology
BLAST of mRNA_S-firma_F_contig1000.57.1 vs. uniprot
Match:
A0A6H5KBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF2_9PHAE)
HSP 1 Score: 54.3 bits (129), Expect = 1.740e-5
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 1 VSRARVALEGLEEGRRHAGRWCRWVSSALAAAD 33
VSRAR L+ L+EGR HAGRWCRW SSAL AA+
Sbjct: 696 VSRAREVLDALDEGREHAGRWCRWASSALVAAE 728
BLAST of mRNA_S-firma_F_contig1000.57.1 vs. uniprot
Match:
D7G2T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T0_ECTSI)
HSP 1 Score: 53.1 bits (126), Expect = 4.000e-5
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 1 VSRARVALEGLEEGRRHAGRWCRWVSSALAAAD 33
V+RAR L+ L+EGR HAGRWCRW SSAL AA+
Sbjct: 424 VTRAREVLDALDEGREHAGRWCRWASSALVAAE 456
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1000.57.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90 )
Total hits: 2
V S R A R V A L E G L E E G R R H A G R W C R W V S S A L A A A D A E G G G G A A G S G G Q T A A T T G P F P A G T P G R G D L V A S S S P P S G V T E T Q G G D D T A G G P V R S S D R V A P P P S S D S D T G L Q Q K Q Q Q Q Q Q L L E R A G A L Q E E L E R R V L A T H G T P G E T S A G G V P A L L A A V E A G L R L Q E E K G G 20 40 60 80 100 120 140 160 Expect = 1.74e-5 / Id = 72.73 Expect = 4.00e-5 / Id = 69.70 Sequence A0A6H5KBF2_9PHAE D7G2T0_ECTSI
Match Name E-value Identity Description
A0A6H5KBF2_9PHAE 1.740e-5 72.73 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7G2T0_ECTSI 4.000e-5 69.70 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
V S R A R V A L E G L E E G R R H A G R W C R W V S S A L A A A D A E G G G G A A G S G G Q T A A T T G P F P A G T P G R G D L V A S S S P P S G V T E T Q G G D D T A G G P V R S S D R V A P P P S S D S D T G L Q Q K Q Q Q Q Q Q L L E R A G A L Q E E L E R R V L A T H G T P G E T S A G G V P A L L A A V E A G L R L Q E E K G G 20 40 60 80 100 120 140 160 Score = Sequence Coil
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 106..130
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_S-firma_F_contig1000.57.1 ID=prot_S-firma_F_contig1000.57.1|Name=mRNA_S-firma_F_contig1000.57.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=165bp back to top