mRNA_S-firma_F_contig108.1074.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: D8LL02_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL02_ECTSI) HSP 1 Score: 885 bits (2288), Expect = 4.380e-307 Identity = 553/906 (61.04%), Postives = 613/906 (67.66%), Query Frame = 1
Query: 412 SSRTTVRVGDNVVVYLPSGGKAKGTVSAESSRDRYEVTLENGDVEKRVHSRNIALPRRHXXXXXXXXXXXXXXXXXXXXXXXXXXKKGSLRRQESRHDVXXXXXXXXXXXLSKSGSQSQQDHNPVSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSSPMSQGLSTMTSAASGGGDPAQQPPEVESHSPDTAPTGQTLAP-IEAPLSESEPDTSNGEK----KRGSSSERGSPSPLSSKVRQAQGLLKTMFWKKGEEQGGG--SIQRERSSSASQRWSXXXXXXXXXXXXXXXXXXAEEGSSRSVPPGGNEAEGD-DIDKLDPPTPTSEHSEDAAASTPLGAAALKGHARRLSHGLTRGRSRNRKSEAGQGGASESPASRSPSLAAKLGATLRGAVMGTTQLGVHKPHA-DQQTPAAGKSPRSGSDADGASDATYSTGASTKEKKLSRREGRGSRRKPSAA-GRAEDHGGGHSSDGFDSDIFGQGSPLARATYGSIDPRNFPDAVHSYIGARERMEHEMSASGPAFLPCVDSLAANSAADGAIKGWGRRRG-SLDITKQASSTTQRTEQHQPFTEAMFKAGISETKHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGDSRHPGLNIRPGQESRVLTTKTFKFNAADAQQRLLWVTVIEALMKKHGWGVDADRCRSTGAPRHGGPGADTGDSLYWGGTWDG-ETAGTE-AARRQAPGRLDNGSN-------INTRTLEDELGHHGLKEGVVGENLAARKGSVMNFVEEQEDDRKLSLRQ--------------LDNGTFTLPAQQQRGLRIPYSPGGKRGSLTTGALSPPVLTSGGARRQSSLKSD 3027
SS +R GD VVVYLPSGGKAKG VS ESSRDRYE+TLENG+VEKRVHSRNIAL +H KK + RR+ESR D + S++ ++ SS +P S S G ST+ SAASGGGDP Q PP ESHSPDTAPT +T P +EA +SESE +TSNGE+ RGS ERGS SPLSSKVRQAQGLLKTMFW+KGEEQGGG S E SAS+RWS + SVP G+E + +KLD P PTSEHSEDAAASTPLGAAALKGHARRLS GLTRGRS ++ SRSPSLA KLG TLRGA+MG TQLGVH PHA D TPAA S DAD SDATYSTGAS+ ++ SRRE R SR + A +DHGG SSDGFDSDIF Q SP+A YG DPRN PDAV+SYIGARE+MEHEMSASGP FLP VD+LAA + A+GA+ WG+ RG SLDITKQASSTTQRTEQHQPFTEAMFKAG+SET+HSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYAC+CELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKG+SRHPGL+IRPGQESRV TTKTFKFNAADAQQRLLWVTVIEALMK+HGWG+DADRCRS APRHGG A GDSL WG TW G E GTE A +R RL++G N +++ D ++G K SVMNFVE++ DD L+L+Q L T P QQRGL IPYSPGGKRGSLTTGALSPP + GGARRQSSLKSD
Sbjct: 111 SSTPKIRTGDKVVVYLPSGGKAKGVVSVESSRDRYEITLENGEVEKRVHSRNIALASKHRSHRRNRSDQARSSSSRSQA------KKNTRRRRESRADAPGREQSHGDESGLEPESRTPREQRSNSS----WVLGATPPSSAEALVGQRKVGEDDQPVSLPSTGPSTVASAASGGGDPIQPPPVAESHSPDTAPTRRTSPPPVEALVSESERETSNGERGSSLDRGSLHERGS-SPLSSKVRQAQGLLKTMFWRKGEEQGGGGGSSGTEGGRSASRRWSRGNSLSRRFSGGSGDDPGENVRNLNSVPVSGDETQRKKSTNKLDSPIPTSEHSEDAAASTPLGAAALKGHARRLSRGLTRGRSXXXXXXXXXXXSASPATSRSPSLATKLGMTLRGAIMGKTQLGVHNPHAADVHTPAANLS-----DADAGSDATYSTGASSAKRDESRRERRASRPRGGALLDGGKDHGG-VSSDGFDSDIFRQDSPMAATAYGG-DPRNLPDAVYSYIGAREKMEHEMSASGPVFLPRVDNLAAKTVAEGAVPAWGKLRGGSLDITKQASSTTQRTEQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACACELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRVRTTKTFKFNAADAQQRLLWVTVIEALMKRHGWGMDADRCRSMRAPRHGGLTAGAGDSLAWGNTWGGGEAEGTEPAVKRHVSLRLNDGLNGAEAVQEVSSPLRADHRQQERSRKG--------SKSSVMNFVEDR-DDGDLNLQQGPHHQQNDEEMLAMLRGTTSPAPQLQQRGLSIPYSPGGKRGSLTTGALSPP-MPFGGARRQSSLKSD 988
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: A0A835ZLL0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLL0_9STRA) HSP 1 Score: 276 bits (707), Expect = 1.030e-74 Identity = 180/426 (42.25%), Postives = 227/426 (53.29%), Query Frame = 1
Query: 1882 NFPDAVHSYIGARERMEHEMSASGPAFLPCVDSLAANSAADGAIKGWGRRRGSLDITKQASSTTQRTEQHQPFTEAMFKAGISETKHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACSCELRYYRT---------------------------HAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGDSRHPGLNIRPGQESRVLTTKTFKFNAADAQQRLLWVTVIEALMKKHGWG----VDADRCRSTGAPRHGGPGADTGDSLYWGGTWDGETAGTEAARRQAPGRLDNGSNINTRTLEDELGHHGLKEGVV--GENLAARKGSVMNFV--EEQEDDRKLSLRQLD-NGTFTLPAQQQRGLRIPYSPGGKRGSLTTGALSPPVL-------TSGGARRQSSLKSDL 3030
+ P AV YI R ME MSA+GP LP + A S ADG RR G+L +K+ S Q + PFTEA+FKAG+SET HSTKQGILLEG LQK+SP S+ G +WH RY VLYA SCELRYYR +A+WGRIP+GERGS PLRL+V+IEQPS K++GCRFDLV H+G R+PG+ IRPG E VL+TKT KF A QQRLLWVTVIE+LMK+HGWG R + + ++Y G G T T + + + L+D G E G+ +A + ++ + E EDD + R +G G++IP+SPGG+RGSL T L+PP+ G RR SSLK DL
Sbjct: 607 SLPRAVDDYIDVRVDMERRMSATGPRRLPQPHAFA--SFADG------RRHGTLSYSKELVSGAQTAAESMPFTEALFKAGVSETPHSTKQGILLEGWLQKYSPNSVAGRKWHARYCVLYAGSCELRYYRACQASGWRWFSWCVSVERQGVASETGHHDKDASWGRIPIGERGSTPLRLLVRIEQPSKAKWKGCRFDLVARHRGSGRYPGIQIRPGTERTVLSTKTLKFCAETPQQRLLWVTVIESLMKQHGWGDGPEAPQQRHAQXXXXXXXXXSSRSPSAMYSTGRSLGATGATAFGNTM--------TELPAKWLDDRHGTLSFVEDAASGGDKESADGSAALSDIASEPAEDDNEAERRHAPVHGAVG-------GVKIPFSPGGRRGSLVTQTLTPPIADRRASASADGAQRRSSSLKRDL 1009
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: A0A7S3UTN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTN7_HETAK) HSP 1 Score: 115 bits (287), Expect = 2.800e-24 Identity = 69/155 (44.52%), Postives = 88/155 (56.77%), Query Frame = 1
Query: 2149 KQGILLEGDLQKF-SPESMRGVRWHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGDSRH----------PGLNIRPGQESRVLTT-----------KTFKFNAADAQQRLLWVTVIEALMK 2547
KQG LLEG L K+ S ++R WH+RYFVL A S ELRYY ++AWG IPL E+ ++PLR V +IE P+D K+ G RFDLV + G ++ PG R G+E KTFK A DA RLLWVTV++ LM+
Sbjct: 145 KQGALLEGALLKWASGGALRRGGWHERYFVLLARSRELRYYADFTDSAWGSIPLEEKCAVPLRTVERIEVPTDAKWAGRRFDLVCVDWGGGKYAADEDPQPGAPGGGEREGEEGTPXXXXXXXXXXXRAGKTFKLVAPDAATRLLWVTVLQDLMR 299
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: A0A1W0A2G2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2G2_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.570e-18 Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 2155 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGDSRHPGLN------------IRPGQESRVLTT----KTFKFNAADAQQRLLWVTVIEALMKK 2550
G+LLEG L++ +RG++ W+ RYFVLYA ELRYY ++ WG IPLGE GSI LRL+ +I +PS KY+GCRFD + S P L+ P Q ++ TT + + A Q +LWV +++L+ +
Sbjct: 189 GVLLEGWLRQKQRRGIRGLKKWNSRYFVLYAKVHELRYYSDVVQSGWGPIPLGEIGSISLRLIQRISKPSHPKYKGCRFD-ITCRSSSSGVPDLDDDPLSSDDEAKKASPKQPPKIKTTPKASRVYSLIADSPQTTVLWVNTLDSLLTR 336
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: A0A5D6YFM8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFM8_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.840e-16 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 2155 GILLEGDLQKFSPESMRGV-RWHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLV 2397
G+LLEG L++ ++G+ RW+ RYFVLYA S E+RYY +AWG IPLGE GSI LRL+ KI +P KYRGCRFD+
Sbjct: 439 GVLLEGWLRQKQRRGVKGMKRWNARYFVLYAKSNEVRYYADVVPSAWGPIPLGEIGSISLRLIQKISKPGHPKYRGCRFDIT 520
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: K3WY78_GLOUD (PH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY78_GLOUD) HSP 1 Score: 94.0 bits (232), Expect = 5.850e-16 Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 2158 ILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGDSRHPGLNI------------------RPGQESRVLTTKTFKFNAADAQQRLLWVTVIEALMKK 2550
++LEG L++ M+G++ W+ RYFVLYA + E+RYY ++AWG IPLGE GSI LRL+ +I +PS KYRGCRFD+ + + + + + + S +++ + A Q + WV +++L+++
Sbjct: 484 VVLEGWLRQKQRRGMKGMKKWNTRYFVLYAKTNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYRGCRFDITCRNSWGTHYADDYVSSDXXXXXXXXXXXXXXXKQERSSTPRSSRVYSLMADSPQTTVTWVNTLDSLLRQ 633
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: A0A8K1C7U9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7U9_PYTOL) HSP 1 Score: 93.6 bits (231), Expect = 9.870e-16 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 2155 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLV 2397
G+LLEG L++ ++G++ W+ RYFVLYA + E+RYY ++AWG IPLGE GSI LRL+ +I +PS KY+GCRFD+
Sbjct: 348 GVLLEGWLRQKQRRGVKGMKKWNSRYFVLYAKTNEIRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYKGCRFDIT 429
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: A0A0W8DTJ9_PHYNI (PH domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DTJ9_PHYNI) HSP 1 Score: 90.9 bits (224), Expect = 4.780e-15 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 2155 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGDSRHPGLNIRPGQES 2457
G+LLEG L++ ++G++ W+ RYFVLYA S E+RYY ++AWG IPLGE GSI LRL+ +I + S KY+GCRFD+ + + + + +E+
Sbjct: 374 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEEN 475
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: A0A329SND2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SND2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 5.290e-15 Identity = 55/159 (34.59%), Postives = 85/159 (53.46%), Query Frame = 1
Query: 2155 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVV-----LHKGD----------SRHPGLNIR--------PGQESRVLTTKT---FKFNAADAQQRLLWVTVIEALMKK 2550
G+LLEG L++ ++G++ W+ RYFVLYA S E+RYY ++AWG IPLGE GSI LRL+ +I + S KY+GCRFD+ H D S + N+ P ++ + T K+ + A Q + WV ++++L+ +
Sbjct: 375 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEENASNNVSTNVNNDKATASTPAKQEKSGTPKSSRVYSLVADSPQVTVAWVNMLDSLLTR 533
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Match: D0N1K1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1K1_PHYIT) HSP 1 Score: 90.9 bits (224), Expect = 6.350e-15 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 2155 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGDSRHPGLNIRPGQES 2457
G+LLEG L++ ++G++ W+ RYFVLYA S E+RYY ++AWG IPLGE GSI LRL+ +I + S KY+GCRFD+ + + + + +E+
Sbjct: 308 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEEN 409 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig108.1074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig108.1074.1 >prot_S-firma_F_contig108.1074.1 ID=prot_S-firma_F_contig108.1074.1|Name=mRNA_S-firma_F_contig108.1074.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1013bp MARSSSRHRDARDGGSSSSGRVVMVSQRSSGTAHTHPPREKKRDKKKKTPback to top mRNA from alignment at S-firma_F_contig108:23279..27347+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig108.1074.1 ID=mRNA_S-firma_F_contig108.1074.1|Name=mRNA_S-firma_F_contig108.1074.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4069bp|location=Sequence derived from alignment at S-firma_F_contig108:23279..27347+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig108:23279..27347+ >mRNA_S-firma_F_contig108.1074.1 ID=mRNA_S-firma_F_contig108.1074.1|Name=mRNA_S-firma_F_contig108.1074.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=6078bp|location=Sequence derived from alignment at S-firma_F_contig108:23279..27347+ (Sphaerotrichia firma ET2_F female)back to top |