mRNA_S-firma_F_contig108.1069.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI) HSP 1 Score: 665 bits (1716), Expect = 2.100e-209 Identity = 505/1055 (47.87%), Postives = 577/1055 (54.69%), Query Frame = 1
Query: 1 KVTSVKSAKGRDWLQGDVNDNEEEDPLEDSFRLANSEKGNENEQGPRQMLEVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEFGGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQLYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEEKSFMVMASTAVEKDGWLQAIRLCMNDLSAN--AAARERVYSGGXXXXXXQVLDHRAAPRQQQPFSGASSASS---SPYGWSLTSAHNPLLAASAPRSVWVPAGPARPGATHGHGLSYGGRANGQLRLVDFCLPAWAGVRTSCGCLSHTEVTWGKDGVPPAGLQ---GGGLSGXXXXXXXXXXXXXVSVGDGLSPAWYGQPQNTKKDAARPGAGGKSESDSPKKVSLEISMKPLEPMGLRLRDLHPECGGGVVVVGFERSAAGKKAGVLQGDRIIAVDGFSVSTTADIVWALQQQRHRQQAAEKAEPPFFGSDRTKTAGGSRRKVRLTALRGFTKSDKPWMPRLKVEPSPTGTNLTPPSSAVESPGSDETDVPSPQLSAPGRKTFSGIGTSRNSTLGFAG--GGRGAGTRSAXXXXXXXXAGGVTAKIYAADEQPLLSAATVESGYGALPPSPETAVSTPARVQRPFSN----ANRNMTSGS-----------------ETPVADAAARRKQSFISTRASTVEIGNDHNNSGSSSVMPVLAIAPRTPEATKNEEDSGDGGDSNGTGADSAXXNGGXXXXXXXXXXXXXXXXGDPAVPFGTFRGGGRATPASASQPGEQEQXXXXXXXGPGQGERRSSFLGLEVGNALAACWGGQAYDD--DGSRPAEFDVDNDEEVD-DTRVLRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLTAVSPSRVPPPLVSVASTLPLPPVSMASS 3063
KVTS GRD L+G+ + D R + N +E+GPRQML+VFLKSAPFLKMYSEYVNNFD+ARERL ALE DN SFSAFLTACEKQKPCRGL LRDFL+LPVQRIPRYRLLLETILQ T+++S MHS VEESLS MGGIASKIN+D+SL+ ++NKVYQLQQEFGGASFV ASRLFV+EGDLFKVARNGVEKL FVLFNDLLVYGQAKRRR L L RG+ REQLYHHRRD+NLS CF+VDAP+YGSRCSSFLGETGMLV++EEK+FMVMASTAVEKDGWLQAIRLCM +LS + ARER Y QV+D A R SP WS+ S H+P+ AASAPRSVWVP G LRLV+FCLP WAGVRTSCGCLSHTE+TWGKD + G GG G +VG G +P + ++ P +S + SP+KV+L ISM+P EPMGLRLRD+HPECGGGVVV+GFERSAAGK+AGVLQGDRI V+ E P G D ++ VPSP LSAPGRKTFSG GTS N+TLGFAG G XXXXXXXX + TV + PSPE +S P R + FS A R+ SGS + + P +P+ TK +EDSG+ GDSNG+ ADS GG GDPAVPF TFRGGGRATP+ Q XXX L L VG+ALAACWG Q +D + SRP EFD+ N EEV+ + R++ XXXXXXXXXXXXX LLLTAVSPSRVPPPLVSVAS LPPVS ASS
Sbjct: 128 KVTSA----GRDCLEGE--------DIGDPLRPTSP---NISEKGPRQMLQVFLKSAPFLKMYSEYVNNFDTARERLTALERDNSSFSAFLTACEKQKPCRGLHLRDFLVLPVQRIPRYRLLLETILQYTSIDSNMHSAVEESLSTMGGIASKINSDLSLKLKRNKVYQLQQEFGGASFVTASRLFVREGDLFKVARNGVEKLHFVLFNDLLVYGQAKRRRPL----LRRGSSREQLYHHRRDMNLSNCFIVDAPSYGSRCSSFLGETGMLVISEEKTFMVMASTAVEKDGWLQAIRLCMRELSTSNSVVARERGYGSSRN----QVVDDARAQRXXXXXXXXXXXXXXXXSPQSWSVAS-HSPM-AASAPRSVWVPG-------------KNGSHKTSSLRLVEFCLPPWAGVRTSCGCLSHTELTWGKDSLAAGGQDQGLGGVAGGMSGVGWSPNGGDSRNVGVGAAPY-----SDLRQSGGTPQP--RSGTTSPRKVALVISMRPSEPMGLRLRDVHPECGGGVVVIGFERSAAGKRAGVLQGDRITEVN---------------------------ESPASGED-----------------------------------------------------DEDASVPSPVLSAPGRKTFSGRGTSGNNTLGFAGFYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPRVPDNITVNTPVA---PSPEAVLSAPGR--KTFSGGGGAARRSSKSGSLGFGFSGADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALTLAVDNPPSPDETKGDEDSGEWGDSNGS-ADSTG--GGRPLKVPAPTQANVNAGGDPAVPFATFRGGGRATPSREGQXXXXXXXXXMPS------------LRLGVGSALAACWGVQETNDNDENSRPTEFDLGNSEEVEVEERIV----------VRKPPPVLVAMSRGTSATXXXXXXXXXXXXXDEVFGDDARSAAGSSGSGSSRDSSLLLTAVSPSRVPPPLVSVASWGTLPPVSRASS 1027
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: W7TL77_9STRA (Pleckstrin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL77_9STRA) HSP 1 Score: 160 bits (405), Expect = 7.350e-36 Identity = 104/292 (35.62%), Postives = 154/292 (52.74%), Query Frame = 1
Query: 109 EKGNENEQGPRQMLEVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEFGGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQLYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEEKSFMVMASTAVEKDGWLQAIRLCMNDLSANAAARERVYSGGXXXXXXQVLDH 984
E+ +E ++G + F K+APF KMYS YV+N+D A E L L L F+AF+ ACE Q+ C+GL LR +LI+P+QRIPRY+LLL +L++T E +E ++ + G+ IN DI ++++ KV ++Q+ + + V ASR F KEG L KV R G + +FVL NDLL+YG K E+ HR+ ++LS+ FVVD S E ++ KSF+V + +K W+ A C ++ +Y G Q L H
Sbjct: 114 EQFSELQRGSQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLNLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPIQRIPRYKLLLTELLKHTPEEHPDFEDLEAAVKLVSGVVGAINEDIKRQEKRFKVIEIQERWD-TNLVTASRKFEKEGMLVKVCRKGPKARQFVLLNDLLIYGARKI------------ASSEKCTLHRK-VDLSELFVVD---------SGNAEKTFILATRAKSFVVQCADMSDKKTWMAAFAACFAEMEKTV-----LYGKGRVLNKDQRLTH 377
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: A0A835YJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ47_9STRA) HSP 1 Score: 158 bits (400), Expect = 4.730e-35 Identity = 107/269 (39.78%), Postives = 149/269 (55.39%), Query Frame = 1
Query: 154 VFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEFGGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQLYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEE-KSFMVMASTAVEKDGWLQAIRLCMNDLSAN--AAARERVYSGG 951
VF +SA F KMYS Y+ N+D A +R+ LE F AF+ ACE Q+ CRGL LR +LI PVQR+PRY+LLL +L++T ++ + +LS + +A+++N + ++ KV +Q++F +FV ASR VKEG L KV G K +FVLFND+++YG R G+L T Q Y + I L +C V+D Y S + G ++V KSF+V+A TA K WL A C LS AA R GG
Sbjct: 119 VFKESASFFKMYSMYIVNYDEAMKRVRLLEGSG-EFRAFVRACELQEACRGLDLRSYLIQPVQRVPRYKLLLAELLKHTKETHPDYANISMALSEITVVATRLNENARDHDRRQKVLDVQEQFK-ENFVTASRYLVKEGSLRKVCNGGPRKYKFVLFNDMVLYGTETLR-----GMLLDKT--RQRYKAHKKIPLDECMVLD---YDS-------DVGFVLVNHAGKSFIVLADTARAKQEWLDAFSECFASLSRGNEAAMRRNSEEGG 368
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: A0A7S1TVV6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV6_9STRA) HSP 1 Score: 143 bits (361), Expect = 3.630e-31 Identity = 104/273 (38.10%), Postives = 142/273 (52.01%), Query Frame = 1
Query: 97 LANSEKGNENEQGPR--QMLEVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSK-VEESLSAMGGIASKINADISLRQQKNKVYQLQQEFGGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYG-QAKRRRALGRGLLSRGTGREQLYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEEKSFMVMASTAVEKDGWLQAIRLCMN 903
LA+ EK E E R + + A F KMYS Y+NN+D+A L L N +AF+ ACE Q C L DFLI PVQR+PRYRLLL+ +L+ T + + ++L + +N+ + + + KV QL+ EFG V SR FVKEG L K++R G +K RFVLFNDLL+YG Q R L LSRG G ++ H + L VVD + +F V+ EKSF+ A + E W+ A+R C +
Sbjct: 77 LADLEKHKELEPHERASKTMVTISSYAGFFKMYSVYINNYDNAMRVLCRLRQ-NPVVAAFIRACELQPTCHNKVLSDFLIQPVQRMPRYRLLLQQVLKATGNGYEEERELIRDALKKIEESTHTVNSQVHENEAREKVQQLKDEFGVPELVTPSRRFVKEGFLSKISRRGPKKFRFVLFNDLLIYGTQESAFRTL---TLSRGNGTWKVNHW---LELQNVAVVDKGVPTQQNGAFA------VLTAEKSFIAFADSTGEAAEWVSAVRECQS 336
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: A0A6P8IIR1_ACTTE (FYVE, RhoGEF and PH domain-containing protein 6-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IIR1_ACTTE) HSP 1 Score: 140 bits (353), Expect = 2.540e-30 Identity = 90/273 (32.97%), Postives = 139/273 (50.92%), Query Frame = 1
Query: 151 EVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEF---GGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQ-LYHHRRDINLSKCFVVDAPAYGSRCSSF-LGETGML--VVAEEKSFMVMASTAVEKDGWLQAIRLCMNDLSANAAARERVYSG 948
+ FL APF+K+YS Y NNF+ A L E + F +F+T E + C+GL LR LI PVQR+PRY+LLLE++L T + SK+EE+ + +A IN +I + K+ +Q+ G +A R F+KEG L K + G ++ F LF+D+L+Y + GT R+Q Y RR L++C V +GS + + G L + ++K+ +V + + +E W AI+ + L A+ RV G
Sbjct: 120 DAFLAMAPFIKLYSTYANNFERASNMLQEWEKKSQDFVSFITRQEAMQECKGLNLRALLITPVQRVPRYKLLLESLLNKTPRDYPDFSKLEEATEEIAKVAEHINENIRQHENFQKMLMIQKSLTGEGAPKILAPGRFFIKEGPLLKACKRGSQERMFFLFSDILIYSKKS------------GTDRDQSTYSCRRVFPLNECEVEQM--FGSSLDTDGAADVGSLFKISCQDKTLLVYSKSKLEASSWFNAIKDAIGKLKICRASLRRVSRG 378
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: UPI00138FF88E (FYVE, RhoGEF and PH domain-containing protein 2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FF88E) HSP 1 Score: 140 bits (354), Expect = 2.890e-30 Identity = 93/274 (33.94%), Postives = 142/274 (51.82%), Query Frame = 1
Query: 151 EVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEF---GGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQL-YHHRRDINLSKCFVVDAPAYGSRCSSF-LGETGML--VVAEEKSFMVMASTAVEKDGWLQAIRLCMNDLSANAAARERVYSGG 951
+ FL APF+K+YS Y NNF++A L E + FSAF+T E + C+GL +R LI PVQR+PRY+LLLE++L T + SK+EE+ + +A IN +I + K+ +Q+ G +A R F+KEG L K R G ++ F LF+D+L+Y + S +EQ Y RR L +C + +GS + + G L V +K+ ++ + + E W AIR +++L +N A+ RV GG
Sbjct: 189 DAFLAMAPFIKLYSTYANNFEAASRLLQEWEKKSPEFSAFITRQEALEECQGLNIRALLITPVQRVPRYKLLLESLLNKTPRDYPDFSKLEEATYEIAKVAEHINENIRQHENFQKMLSIQKCLTGEGAPKILAPGRFFIKEGPLLKACRRGSQERMFFLFSDILIYAKK-----------SSSLDKEQCTYSCRRVFPLFECTLEQM--FGSSVDTDGAADVGSLFKVTCRDKTLLLYSKSKQEAATWFSAIRDAISNLKSNRASLRRVSRGG 449
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: A0A835Z6E2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E2_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.570e-29 Identity = 84/204 (41.18%), Postives = 124/204 (60.78%), Query Frame = 1
Query: 301 RGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEFGGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQLYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEEKSFMVMASTAVEKDGWLQAIRLCMNDLS 912
RGL+LRD LI+PVQRIPRYRLLLET++++T + + E+L+ M + +IN D+ +++N+V LQ +F +VAA+R VK+G L KV R G + +FVLF+DLLVYG L G+ Q Y R + L++C+VVD A G+ + E +V++ +K F+V AS AVEK W+ A+R M+ L+
Sbjct: 386 RGLQLRDLLIMPVQRIPRYRLLLETMVRHTKDADPLSRGLAENLAQMSTVVDQINQDVHKMERRNRVLALQYQFA-EEWVAAARTLVKDGPLTKVCRGGPRRFQFVLFSDLLVYGSET---------LMGKWGKRQ-YKMNRALELARCYVVDGLAPGAVVPAGAEEAAFMVLSADKCFVVQASDAVEKAEWVAALRGAMDALA 578
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: F4PM20_CAVFA (Pleckstrin domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PM20_CAVFA) HSP 1 Score: 138 bits (347), Expect = 9.430e-29 Identity = 82/265 (30.94%), Postives = 145/265 (54.72%), Query Frame = 1
Query: 151 EVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEFGGAS--FVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQLYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEEKSFMVMASTAVEKDGWLQAIRLCMNDL-SANAAARER 936
+VFLK APFL+ Y+ Y N+++S+ L+AL N +F +FL C + +GL L +LI+P+QRIPRY+LLLE +L N+ + + ++E++S + +A +++ ++ Q K+KV +Q + G V +R+F+KEGDL K++ V F LFNDLL+Y Q +++ Y ++ L C+V D P + F +++ K++ + A ++ +K W++ + +N L AN A+++
Sbjct: 512 DVFLKMAPFLRAYTVYSNSYNSSILLLSALTKSNPTFQSFLAKCLLKPASKGLNLSAYLIMPIQRIPRYKLLLENLLSNSREDHIDYQDIKEAISVISSVACELDERLNQFQIKHKVLDIQNQLEGLDHDIVKPTRVFLKEGDLKKISDRVVNTRHFFLFNDLLIYAQKEKKNQ---------------YRYKHSFPLESCWVKDIPDTNRFQNLFQ------IISNNKTYFLCAPSSEDKLSWMRLLNEVINKLVDANPDAKDQ 755
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: UPI00109BAF0D (rho guanine nucleotide exchange factor 39-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BAF0D) HSP 1 Score: 134 bits (337), Expect = 1.790e-28 Identity = 84/270 (31.11%), Postives = 136/270 (50.37%), Query Frame = 1
Query: 151 EVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEF---GGASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQ-LYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEEKSFMVMASTAVEKDGWLQAIRLCMNDLSANAAARERVYSG 948
+ FL APF+K+YS Y NNF+ A L E + F F+ E ++ C+GL LR LI PVQR+PRY++LLE++L T + SK+EE+ + +A IN +I + K+ Q+Q+ F G +A RLF+K+G L K R G ++ F LF+D+L+Y + G+ ++Q Y +R L C + +GS + + + +K+ + + + E W +AI+ + L A+ +RV G
Sbjct: 122 DAFLAMAPFIKLYSTYANNFEHASRILQEWERKSPEFVQFIXRQEAKEECKGLNLRSLLITPVQRVPRYKMLLESLLNKTPRDYPDFSKLEEATEEIAKVAEHINENIRQHENFQKMLQIQKSFTGEGAPKILAPGRLFIKDGPLLKACRRGSQERMFFLFSDILIYAKKS------------GSEKDQSTYSSQRVFPLKNCQLEQM--FGSSDEAADAGSMFKITCADKTLFLYSKSKCEAVSWFKAIQDAIGTLKTCRASLKRVSRG 377
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Match: A0A2G5BFQ4_COERN (Dbl homology domain-containing protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BFQ4_COERN) HSP 1 Score: 129 bits (324), Expect = 4.270e-28 Identity = 80/253 (31.62%), Postives = 130/253 (51.38%), Query Frame = 1
Query: 151 EVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKPCRGLRLRDFLILPVQRIPRYRLLLETILQNTAMESAMHSKVEESLSAMGGIASKINADISLRQQKNKVYQLQQEFG-GASFVAASRLFVKEGDLFKVARNGVEKLRFVLFNDLLVYGQAKRRRALGRGLLSRGTGREQLYHHRRDINLSKCFVVDAPAYGSRCSSFLGETGMLVVAEEKSFMVMASTAVEKDGWLQAIRLCMND 906
++F++ APFLKMYS Y+ NF SA ++ +N F+ F+ CR L + +L+LPVQRIPRY+LLLE +L++T H + ++L + +A+ +N +I + + ++Q+ G S + R VK G L K+ R ++ F LFND+L+Y L+ +G HR+ + L C V+D P G + F +++ EKSF+V TA +K W+ A+ + D
Sbjct: 92 DIFMRIAPFLKMYSLYLRNFRSALSDISRWLGENHEFAQFIQQASSNPECRELSFQSYLLLPVQRIPRYKLLLEDLLKHTPRTHVDHQCIGDALRTIEEVATFVNENIGENEMTLNIIEIQRRLGLKESLLVPGRRLVKTGTLTKICRKSHQQRNFYLFNDILIYSSGPA------PLIDDHSG------HRK-VLLEGCKVMDIPDTGEWLNQFT------IISREKSFIVYTETAADKVSWIAALSTAILD 325 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig108.1069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig108.1069.1 >prot_S-firma_F_contig108.1069.1 ID=prot_S-firma_F_contig108.1069.1|Name=mRNA_S-firma_F_contig108.1069.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1113bp MLEVFLKSAPFLKMYSEYVNNFDSARERLAALESDNLSFSAFLTACEKQKback to top mRNA from alignment at S-firma_F_contig108:478..10248+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig108.1069.1 ID=mRNA_S-firma_F_contig108.1069.1|Name=mRNA_S-firma_F_contig108.1069.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=9771bp|location=Sequence derived from alignment at S-firma_F_contig108:478..10248+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig108:478..10248+ >mRNA_S-firma_F_contig108.1069.1 ID=mRNA_S-firma_F_contig108.1069.1|Name=mRNA_S-firma_F_contig108.1069.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=6678bp|location=Sequence derived from alignment at S-firma_F_contig108:478..10248+ (Sphaerotrichia firma ET2_F female)back to top |