mRNA_S-firma_F_contig10789.1050.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: D8LU33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU33_ECTSI) HSP 1 Score: 523 bits (1347), Expect = 3.430e-172 Identity = 271/318 (85.22%), Postives = 291/318 (91.51%), Query Frame = 2
Query: 38 EEEDEKAANPAFSKFMQGFWDLASVDVPVRVGAAAMIVRHVSDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLKGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSALTTTTLNNK 991
EE +EKAANP FSKFMQGFWDLASVDVPVRVGAAAMIVRHVS+ +GG DAEYAVKRLVRGMCSSRE ARQGFASCL QVL VLPKD PTTP+VLEQ+LK TQ T AMKGADERELALGRLLGVSALAMSGRL SEPESAEGALKAV+ELYT+RKWIGQAAGEAALLV SKAFEGEGEF+R LPL+ PLLKG+DGSTLQ+ADL+ DQL+LSLG+RSIMRERGLDPQEDAALKQALP FLRHASVVRVGK Q+L+SPLKQSA FPKVHS+WGRLWDDLG+SP GQPRA LS KRLKKLGEVWS +VD ALT T+LNNK
Sbjct: 47 EEGEEKAANPEFSKFMQGFWDLASVDVPVRVGAAAMIVRHVSNPEGG-DAEYAVKRLVRGMCSSRECARQGFASCLAQVLAVLPKDAPTTPAVLEQILKTTQTTAAMKGADERELALGRLLGVSALAMSGRLRSEPESAEGALKAVSELYTKRKWIGQAAGEAALLVTSKAFEGEGEFVRVVLPLMVPLLKGKDGSTLQLADLSSDQLLLSLGLRSIMRERGLDPQEDAALKQALPAFLRHASVVRVGKAQDLVSPLKQSAGVFPKVHSLWGRLWDDLGLSPAGQPRAPLSAKRLKKLGEVWSCVVDGALTNTSLNNK 363
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A836CR26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR26_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.670e-66 Identity = 133/318 (41.82%), Postives = 200/318 (62.89%), Query Frame = 2
Query: 62 NPAFSKFMQGFWDLASVDVPVRVGAAAMIVRHVSDAD-GGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGA---LKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLK------------GRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSAL 967
+PAF+KFM+GFWDLA+ + P R GAA +V+H+SD + D +YAV RL+RG+CSSREAARQGFA+CL + L L +++ +T + +++ +AT+ ++KG +ER+ GRL G +A+A SGRLG+ +A+ A L+AV EL+ R W+ Q EAAL +A + + L +PLL +L+ G D ST + D+ DQL L+ G+ +++RER L + AL +++ R ++ G+ LL LKQS AFP++HSVWGR+WDDLG++ P +P A +S KRL+ L + W+ +VD L
Sbjct: 40 SPAFTKFMRGFWDLATSNSPARQGAAFAVVQHLSDPNVPQKDVDYAVVRLLRGICSSREAARQGFATCLAEALLCLSEEQISTADMRDRLFEATKYNGSLKGQEERDACFGRLFGCAAIARSGRLGNSDANADVAVQLLQAVVELHRMRHWLRQVTVEAALDIAKEL--PDALLLSKGVPLLQQMLRPAATVSDGDAAAGEDASTPPLEDMQADQLSLAFGLHALLRERDLLESDSMALHKSM----RRRHLITAGRGAALLEALKQSTRAFPRLHSVWGRIWDDLGLTLP-RPDA-ISDKRLRYLKDFWTTVVDEGL 349
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A6G0XHZ2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ2_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.620e-34 Identity = 99/298 (33.22%), Postives = 148/298 (49.66%), Query Frame = 2
Query: 80 FMQGFWDLASVDVPVRVGAAAMIVRHVSDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLKGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRL--KKLGEVWSAIVDSAL 967
F++ FWDLA ++V RV A I+ H++ A+ + Y +KRLVRG+ SSR+AARQGF++ LT +L P + SVL+ VL + +MKG ++RE GRL G+ A+ SGR+ + L + L +KW +A E L V F P + PLL G VAD DQ+ L++G+R M LD + ++V + Q L+ PLK S ++P++HS W RL D L+PK+L ++ E+WS +V+ L
Sbjct: 37 FLKVFWDLAELNVETRVAAVDSIIAHLTQANDSDELSYTLKRLVRGLASSRDAARQGFSTALTALLHHFPS--LSVESVLDLVLTTMDASNSMKGMEQREHMFGRLFGLLAIFKSGRMTHDDPQLAKLLDELIALSKWKKWFREACYEGLLTVVHAL--PPASFKSTVWPRIEPLLSGN------VADFNADQVALAVGLRQYMVAHNLDKPKGIL-----------TTIVARHQFQHLVEPLKTSTTSYPRLHSAWRRLLDQF-----------LTPKKLDEERFQEMWSVLVEGML 302
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: W4G3D7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3D7_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.060e-29 Identity = 102/298 (34.23%), Postives = 154/298 (51.68%), Query Frame = 2
Query: 80 FMQGFWDLASVDVPVRVGAAAMIVRHVSDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTA-MKGADERELALGRLLGVSALAMSGRL-GSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLKGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSAL 967
F++ FWDLA ++ RV A IV+H++ A+ + Y +KRL+RG+ SSR+AARQGF++ LT +L P P SVL+ +LK+T + +A MKG ++R+ GRL G+ A+ SGRL G++ L V L +KW +A E L + F ALP L LL ST VA DQ+ L++G+ + + L AA A+ A++V L+ PLK S + +P++HS W RL + + A L +R + E+WS +V+ L
Sbjct: 50 FLKVFWDLAELNPATRVAAVESIVQHLNQANDAEELAYTLKRLIRGLASSRDAARQGFSTALTALLHHFPAAVPV-ESVLD-LLKSTMDVSASMKGMEQRDHMFGRLFGLLAIHSSGRLSGADDLVIASLLDEVITLSKWKKWFREACYEGLLAIVESL--PAATFESVALPKLTALL-----STSSVAQFNADQVSLAIGLHTYVHAHNLGA---AAALDAI------ATIVSRHHFHHLVDPLKSSTSIYPRLHSSWRRLVEHFTST------AKLDEERFQ---EMWSVLVEGML 320
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A3R7AZ34_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AZ34_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.560e-29 Identity = 102/298 (34.23%), Postives = 154/298 (51.68%), Query Frame = 2
Query: 80 FMQGFWDLASVDVPVRVGAAAMIVRHVSDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTA-MKGADERELALGRLLGVSALAMSGRL-GSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLKGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSAL 967
F++ FWDLA ++ RV A IV+H++ A+ + Y +KRL+RG+ SSR+AARQGF++ LT +L P P SVL+ +LK+T + +A MKG ++R+ GRL G+ A+ SGRL G++ L V L +KW +A E L + F ALP L LL ST VA DQ+ L++G+ + + L AA A+ A++V L+ PLK S + +P++HS W RL + + A L +R + E+WS +V+ L
Sbjct: 532 FLKVFWDLAELNPATRVAAVESIVQHLNQANDAEELAYTLKRLIRGLASSRDAARQGFSTALTALLHHFPAAVPV-ESVLD-LLKSTMDVSASMKGMEQRDHMFGRLFGLLAIHSSGRLSGADDLVIASLLDEVIALSKWKKWFREACYEGLLAIVESL--PAATFESVALPKLTALL-----STSSVAQFNADQVSLAIGLHTYVHAHNLG----AASLDAI------ATIVSRHHFHHLVDPLKSSTSIYPRLHSSWRRLVEHFTST------AKLDEERFQ---EMWSVLVEDML 801
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A024TY58_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TY58_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.190e-28 Identity = 95/301 (31.56%), Postives = 144/301 (47.84%), Query Frame = 2
Query: 80 FMQGFWDLASVDVPVRVGAAAMIVRHVSDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNT----TAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLKGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFL-RHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSAL 967
F++ FWDLA ++ RV A IV+H++ A+ + Y +KRL+RG+ SSR+AARQGF++ LT +L P T +E VL Q+T +MKG ++R+ GRL G+ A+ SGRL + + E L V L +KW + E L + F+ ALP L LL G VA DQ+ L++G+ + + A+ L RH L+ PLK S + +P++HS W R+ S + L +R + E+WS +V+ L
Sbjct: 44 FLKVFWDLAELNPSTRVAAVESIVQHLTQANDAEEMSYTLKRLIRGLASSRDAARQGFSTALTALLHHFP-----TAVSVESVLDLLQSTMDVSASMKGMEQRDHMFGRLFGLLAIHASGRLAGDADLIETVLDEVIVLSKWKKWFREVCFEGLLTIVESLTPAT--FISTALPKLVALLAG------PVAQFNADQVGLAVGLHQYVHTHAIATDASVVAVPAITTILSRH-------HLHHLVDPLKSSTSIYPRLHSSWRRVVAHFTSS------SKLDEERFQ---EMWSVLVEGML 315
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A7R9YAJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAJ5_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.490e-28 Identity = 107/318 (33.65%), Postives = 160/318 (50.31%), Query Frame = 2
Query: 56 AANPAFSKFMQGFWDLASVDVPVRVGAAAMIVRHVSDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAF---EGEGEFLRAALPLLAPLLKGRD---GSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSALTTTTLNNK 991
AA A + F+Q FW L+ D R AA+ IV HV + YA+KRLVRG+ SSRE+ARQGF+ LT +L P + +T VLE +L +T T MK ++R+ LGRL+G+ AL +GR P S + A +L+ +RKW+ +AA + L+ A KA +G LR L +P L+ D +A+L+P++L +++ +R + ER + ALP + + V + PL+ + FP VH+VW L D++ + P A+L W VD AL +T K
Sbjct: 7 AAAMASNPFLQDFWSLSEPDAAARSSAASRIVLHVRKTPA--ERGYALKRLVRGLQSSRESARQGFSVALTLLLED-PAQELSTDEVLETILSSTATTNKMKRQEQRDALLGRLMGIGALLRAGRAHENP-SCKKIFDAALQLFAKRKWL-RAAATSILIDAIKAMSKAKGLAALLREGL---SPALQEADFFAEDLSNLANLSPEKLAVAISLRRLS-ERTPAASRVQLVDIALPWEAKDGAAA-VELYHAMREPLRLACNTFPAVHAVWDVLLDEILAAQ--DPTAALV--------NTWGRCVDEALADSTHERK 304
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A485KRH2_9STRA (Aste57867_10604 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRH2_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.160e-28 Identity = 99/311 (31.83%), Postives = 153/311 (49.20%), Query Frame = 2
Query: 47 DEKAANPAFSK--FMQGFWDLASVDVPVRVGAAAMIVRHVSDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLKGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRL--KKLGEVWSAIVDSAL 967
D AA + S+ F++ FWDLA ++ RV A IV H++ A+ + Y +KRLVRG+ SSR+AARQGF++ LT +L P D + VL +L + +MKG ++RE GRL G+ A+ SGR ++ +A L + L +KW +A +A L V F+ P + PLL G VA DQ+ L++GV + + L+ + + RH +L+ PLK S ++P++HS W RL D L L ++L ++ E+WS +V+ L
Sbjct: 25 DPSAAGSSDSRNAFLKVFWDLAELNPATRVAAVDAIVAHLTQANDADELSYTLKRLVRGLASSRDAARQGFSTALTALLHHFP-DTVSVSDVLTLLLSTMDVSNSMKGMEQREHMFGRLFGLLAIHQSGR--ADVVAAATLLDELIALSKWKKWFREACYDAVLTVVHSL--PSSSFVDVVWPRVEPLLAGA------VASFNADQVALAVGVHQYLAQHKLEKTYAKTVVGTI--AARHHFA-------QLVEPLKTSTVSYPRLHSSWRRLLDHL-----------LDSEKLDEERFQEMWSVLVEGML 304
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A329S2F5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S2F5_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.440e-28 Identity = 95/315 (30.16%), Postives = 168/315 (53.33%), Query Frame = 2
Query: 38 EEEDEKAANPAFSKFMQGFWDLASVDVPVRVGAAAMIVRHV-SDADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPKDKPTTPSVLEQVLKATQNTTAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLL----KGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSAL 967
+++ ++ ++P F++ FW LA + VR AAA +V H+ S A + +Y +KRLVRG+ SSR+AARQGF++ L+ +L PK + S E + A + ++MK ++RE GRL G+ AL SGRL ++ +K + E+ ++W + EAAL + S E A P+ + L KG D ++ + DQ++L++GV+ + G+D Q+D +KQ LP + ++ L PL+ S+ +P+VHS W ++ + ++P A++ + + E W+ +V+++L
Sbjct: 5 QQDGDEPSSPQKGDFLKLFWTLAESERDVRTQAAAQLVAHLKSSAKQEAEVQYTLKRLVRGLASSRDAARQGFSTALSGLLATFPKQL-SLQSTHELLRDAMEVHSSMKPMEQREHVFGRLFGLLALHRSGRLSADLPLLVAVVKELLEMAAFKRWFRETCYEAALTLLSDV-PAEQFVTELAAPIHSSLQIQPSKGSDEEGVEAWN--ADQVLLAVGVQRYLHVTGID-QDDEQMKQ-LPENFAAVNALQRHNVHLLARPLRGSSGCYPRVHSAWFGVFGYV-LNPTEDASAAVDGELFQ---EAWTVLVENSL 309
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Match: A0A2D4BKC0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKC0_PYTIN) HSP 1 Score: 123 bits (309), Expect = 2.060e-27 Identity = 98/307 (31.92%), Postives = 151/307 (49.19%), Query Frame = 2
Query: 74 SKFMQGFWDLASVDVPVRVGAAAMIVRHVSD-------ADGGGDAEYAVKRLVRGMCSSREAARQGFASCLTQVLTVLPK--DKPTTPSVLEQVLKATQNTTAMKGADERELALGRLLGVSALAMSGRLGSEPESAEGALKAVTELYTRRKWIGQAAGEAALLVASKAFEGEGEFLRAALPLLAPLLKGRDGSTLQVADLTPDQLMLSLGVRSIMRERGLDPQEDAALKQALPPFLRHASVVRVGKTQELLSPLKQSAAAFPKVHSVWGRLWDDLGMSPPGQPRASLSPKRLKKLGEVWSAIVDSAL 967
S+F++ FW LA DV VR AAA ++ H+ A + +Y +KRLVRG+ SSR+AARQGF++ L+ +L P T SVL ++ QN MKG ++RE G+L G+ AL SGRL + ++ + + +KW+ +A E AL V + A E A +A LL G D V+ +Q+ L++G++ M G+ P + A+ Q +VR + L PLK S+A FP+VHS W ++ + + G + + L E W +V+ L
Sbjct: 927 SEFLKLFWTLAETDVAVRSAAAAQLITHLQXXXXXXXTAAFEAEVQYTLKRLVRGLASSRDAARQGFSAALSALLRAFPAHVSLSETLSVLRDAMEVQQN---MKGMEQREHMFGKLFGLLALHRSGRLQGDDALTVEVVRELLAMSAWKKWLREACVEGALTVLADAPRALFESTLAVE--MAALLDGGD-----VSSFNXEQVALAVGMQHYMLVHGIAPADVPAVPQ----------LVRRKQLHLLAEPLKHSSACFPRVHSAWLGVFGHIVHASRGGDKLDA-----ELLQEAWRVLVEELL 1208 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10789.1050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10789.1050.1 >prot_S-firma_F_contig10789.1050.1 ID=prot_S-firma_F_contig10789.1050.1|Name=mRNA_S-firma_F_contig10789.1050.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=325bp MEGSDQEEEEDEKAANPAFSKFMQGFWDLASVDVPVRVGAAAMIVRHVSDback to top mRNA from alignment at S-firma_F_contig10789:2..4460+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10789.1050.1 ID=mRNA_S-firma_F_contig10789.1050.1|Name=mRNA_S-firma_F_contig10789.1050.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4459bp|location=Sequence derived from alignment at S-firma_F_contig10789:2..4460+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10789:2..4460+ >mRNA_S-firma_F_contig10789.1050.1 ID=mRNA_S-firma_F_contig10789.1050.1|Name=mRNA_S-firma_F_contig10789.1050.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1950bp|location=Sequence derived from alignment at S-firma_F_contig10789:2..4460+ (Sphaerotrichia firma ET2_F female)back to top |