mRNA_S-firma_F_contig1078.1042.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1078.1042.1
Unique NamemRNA_S-firma_F_contig1078.1042.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: D8LLB1_ECTSI (Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB1_ECTSI)

HSP 1 Score: 545 bits (1404), Expect = 1.550e-188
Identity = 273/290 (94.14%), Postives = 287/290 (98.97%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFKHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            +ALKNKV+L DCLDYVR+ARAKGLTAPVVLMGYLNPFLAYGLDKLMKDA EAGADGFVVVDLLPDEAH+FVTKCRA++LSF+PLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGAR+GLPADLK+FVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEV ADAPASEIAA+LKKFTEGLKAGIT++EMSF+HTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQ+
Sbjct:  129 VALKNKVTLGDCLDYVRDARAKGLTAPVVLMGYLNPFLAYGLDKLMKDAREAGADGFVVVDLLPDEAHDFVTKCRASELSFVPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARSGLPADLKDFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVDADAPASEIAAHLKKFTEGLKAGITSAEMSFEHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQI 418          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: A0A835YTN0_9STRA (Tryptophan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN0_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 2.760e-139
Identity = 207/292 (70.89%), Postives = 242/292 (82.88%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFKHTG--EQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            +ALKNK+ L+DCL YV+EAR+KGLT PVVLMGYLNPFLAYGLDKLM D  EAGADGF+VVDLLPDEA +FVTKCRANQLSFIPLVSPTTTDDR+PYV SAAD+FVYCVSV GVTGAR GLP DLK FV R+R+ TDKPL+VGFGIS  E V  VA +ADGVV GSA MNA+D+++ DA +++  A++K FT+ L  G+   +MS+ HTG  E   AY   D+   YFG FGGRYIPETLVEAHRELE+AY  A+ADP FHEE+AWYR+EYIGGPT MYHAKRL+E++GGAQ+
Sbjct:  145 VALKNKIRLSDCLRYVKEARSKGLTTPVVLMGYLNPFLAYGLDKLMADVKEAGADGFIVVDLLPDEAGDFVTKCRANQLSFIPLVSPTTTDDRLPYVTSAADTFVYCVSVTGVTGARTGLPDDLKQFVARIRSKTDKPLAVGFGISQPEHVNGVAELADGVVCGSAIMNAIDKISPDASSADKRAHIKAFTQSLTQGLKDGQMSYTHTGAEETSDAYAAADMKAAYFGAFGGRYIPETLVEAHRELEQAYAEAQADPKFHEEIAWYRKEYIGGPTVMYHAKRLSEQLGGAQI 436          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: H6WB94_VAULI (Tryptophan synthase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB94_VAULI)

HSP 1 Score: 394 bits (1011), Expect = 2.150e-130
Identity = 188/292 (64.38%), Postives = 234/292 (80.14%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFKHTGEQG--LAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            +AL+NK+++ DC+ Y+++AR  GLTAPV+LMGYLNPFLAYGLD LM+D   AG DGF+VVDLLPDEA  FV+KCR NQLSFIPLVSPTTTDDRMPYV S+ADSFVYCVSV GVTGAR GLPA+LK F+ R+R  TDKP++VGFGIS    V++V+ IADG V GSA MN +D ++++A  ++   ++KKFT  L   +   ++++KHTG +     Y+  D+   YFGD+GGR+IPETLVEAHRELE+AYE A ADP FHEEV WYR+EYIGGPT MYHAKRL+E+MGGAQ+
Sbjct:   36 VALENKITMKDCIGYIKKARENGLTAPVILMGYLNPFLAYGLDLLMEDVKSAGGDGFIVVDLLPDEAQSFVSKCRKNQLSFIPLVSPTTTDDRMPYVISSADSFVYCVSVTGVTGARTGLPANLKEFIARIRTKTDKPIAVGFGISESSHVEQVSEIADGAVCGSAIMNHLDTISSEASPADKREHIKKFTANLTKDLNEGKLTYKHTGTENPYAEYKNADMRSAYFGDYGGRFIPETLVEAHRELEQAYEEALADPKFHEEVDWYRKEYIGGPTVMYHAKRLSEKMGGAQI 327          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: A0A7S2UWZ9_9STRA (Tryptophan synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWZ9_9STRA)

HSP 1 Score: 345 bits (886), Expect = 4.780e-113
Identity = 173/290 (59.66%), Postives = 223/290 (76.90%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFKHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            IAL NKV+   CL+ V++AR KGLTAPV+LMGY NPFLA+GLDKLM+D  EAG DGF+VVDL P+E   FV  CR + LSF+PLVSPTTTDDR+ +++ AADSF+YCVS+ GVTG+R  LPADL +F+ R+R  TD PL+VGFGIS  + V+ V+  ADG+VVGSA MN +D V ADAP ++  A +K F E +K     SE +F+  GE+  A++  + SG +FG+FGGRYIPETL+EAHRELEE YE AK DP F +E+ +YRR++IGGPTP+Y A+RLT+ +GGAQ+
Sbjct:  124 IALANKVTPDLCLEMVKKAREKGLTAPVILMGYYNPFLAHGLDKLMEDCKEAGVDGFIVVDLPPEEGGLFVNTCREHDLSFVPLVSPTTTDDRISFLSDAADSFLYCVSLTGVTGSRTELPADLSDFLARIRKQTDLPLAVGFGISKPDHVKTVSANADGIVVGSAIMNTIDTVDADAPTADKCAAVKVFVESMKEARVPSE-NFQAGGEKKGAFQSPETSGSHFGEFGGRYIPETLIEAHRELEEEYEKAKVDPEFIKEIDFYRRQFIGGPTPLYFAERLTKAVGGAQI 412          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: D8LQU8_ECTSI (Tryptophan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU8_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 2.530e-112
Identity = 185/290 (63.79%), Postives = 214/290 (73.79%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFKHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            +AL+N ++L +CL+ VR+ARAKGLT  VVLMGYLNPFLAYGL+KL+ DA   G DGF+VVDLLPD+AH+F++KC+   LSFIPLV+PTTTDDR+P++AS  DSFVYCVSV GVTGARA LP  L+ F+ RVR AT KPLSVGFGISS EQVQ VAGIADGVVVGSAFMNA+DE                          AS M  +  GE+          GG  G FGG YIPETLVEAHR LEEAY AAKADP F EE+AWYRREYIGGPTP++HAK L+EEMGG Q+
Sbjct:  101 VALQNGITLTECLEIVRDARAKGLTIAVVLMGYLNPFLAYGLNKLVHDAHRNGVDGFLVVDLLPDDAHDFISKCQEYHLSFIPLVTPTTTDDRIPFIASTTDSFVYCVSVTGVTGARAHLPIGLEKFIRRVRRATGKPLSVGFGISSTEQVQAVAGIADGVVVGSAFMNAIDE--------------------------ASRMRIE--GERKAV-----PPGGNIGAFGGCYIPETLVEAHRGLEEAYAAAKADPCFREELAWYRREYIGGPTPLHHAKSLSEEMGGGQI 357          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: W7TQB9_9STRA (Tryptophan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQB9_9STRA)

HSP 1 Score: 335 bits (858), Expect = 2.100e-106
Identity = 169/297 (56.90%), Postives = 216/297 (72.73%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGIT-------ASEMSFKHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            +AL+NKV L DCL+Y++ ARA+GLT PVVLMGY NPFL YG ++LM D   AG DGF+VVDL P+E   F+  C++  LS++PL++PTT D R+ Y+A++A SF YCVS+ GVTG+R+ +P DLK+FV R+RA TDK L+VGFGIS+   V +VA +ADGVVVGSA ++A+D     +     AA ++ F   LK G         A  ++    G      E +DVS  +FG+FGGRYIPETLVEAHRELEEAYEAA  DPAF EEVA+YR++YIGGPTPMYHAKRLTE +GGAQ+
Sbjct:  124 VALRNKVRLPDCLEYIKSARAQGLTVPVVLMGYFNPFLNYGSERLMDDMVAAGGDGFIVVDLPPEEGALFIKHCQSRALSYVPLLTPTTADHRLAYLAASAGSFCYCVSLTGVTGSRSDVPVDLKDFVARIRAVTDKNLAVGFGISTPTHVAQVAALADGVVVGSAILHAIDSAGPQSDTQARAAKVQAFIAELKGGAQKPGAAGDAGRVTHNGEGNGKAVAEDRDVSHRHFGEFGGRYIPETLVEAHRELEEAYEAALKDPAFQEEVAFYRKQYIGGPTPMYHAKRLTEAVGGAQI 420          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: A0A7S4DAV4_HETAK (Tryptophan synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAV4_HETAK)

HSP 1 Score: 325 bits (832), Expect = 1.810e-102
Identity = 171/295 (57.97%), Postives = 211/295 (71.53%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFKHTGEQGLAYEGKDVSGGYFGD-----FGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            IAL NK++  D L++VR+AR +GLT PVVLMGY NPFL YGLDKLM++  E G DGF++VDL P+   E + KCR   LSF+PL+SPTTTD+R+ ++A AADSF+YCVS+ GVTGAR+GLP DL +FV R+R  TD PL+VGFGIS  E V +V+ +ADGVVVGSA MN +D  AA + A E AA L+ F   LK        +      +G AY     S  YFGD     FGGRYIPETL EAH ELE+AY  AKADPAF  EV +YRRE++GGPTPMYHA+RL++  GGAQ+
Sbjct:  118 IALANKITTKDSLEFVRQARERGLTIPVVLMGYYNPFLRYGLDKLMQECKEVGVDGFIIVDLPPEYGEEIINKCREYGLSFVPLISPTTTDERIAFLADAADSFLYCVSLTGVTGARSGLPDDLPDFVARIRGVTDMPLAVGFGISQPEHVAQVSKLADGVVVGSAIMNTIDGCAAGSSAQEKAAALEAFVGTLKGACGEPAQTAGPARARG-AYVAPPTST-YFGDDAQTGFGGRYIPETLAEAHVELEKAYAEAKADPAFQAEVDFYRREFVGGPTPMYHAERLSKHCGGAQI 410          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: A0A7S0XDP8_9STRA (Tryptophan synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDP8_9STRA)

HSP 1 Score: 308 bits (790), Expect = 2.390e-96
Identity = 161/294 (54.76%), Postives = 211/294 (71.77%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFK----HTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            +AL + V+L  C++ V++AR KGLT P+VLMGY NPFL YGL++LM D+ +AG DGF+VVDL P+E   FV K  A  L++IPLVSPTTTD+R+ Y++S A SF+YCVSV GVTGAR  LP+DLK FV R+R ++D PL+VGFGIS+ E V +V+ IA+GVV+GSA ++ +D  A D    E A  L+ F   L   +T  E +      HT         +D+S   FG+FGGRYIPETL+EAHRELE AY +A ADP FHEE+A+YRRE+ GGPTP+Y A+ LT++MGGA +
Sbjct:  128 VALSHGVTLKACINIVKQAREKGLTVPLVLMGYYNPFLHYGLNELMTDSKDAGIDGFIVVDLPPEEGSIFVDKAIAKGLAYIPLVSPTTTDERIAYLSSNAGSFMYCVSVTGVTGARGELPSDLKEFVNRIRKSSDVPLAVGFGISTPEHVHQVSEIAEGVVLGSAIISTIDS-ALDKTPKERAKTLEDFISTLSVALTKRETAKDTENFHTDNSAPKPIHRDISNRNFGEFGGRYIPETLIEAHRELEAAYASAIADPKFHEEIAFYRREFTGGPTPLYFAENLTKKMGGADI 420          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: A0A7S1U774_9STRA (Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U774_9STRA)

HSP 1 Score: 306 bits (784), Expect = 1.380e-95
Identity = 160/294 (54.42%), Postives = 211/294 (71.77%), Query Frame = 1
Query:    1 IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITASEMSFKHTGEQGLAYEGKDVSGGY----FGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            +ALKN + + DC+++V  ARAKGLT PVVLMGY NPFLAYG DKL+  A+EAG DG ++VDL P+E  EF++KC    L+F+PL++PT+TD+R+  ++ AA SF+YCVSV GVTGA++    DL+ F+GRVR  T+KPL+VGFGI+  EQV EV+ +ADGVVVGSA +N V E        + AA+LK FT  LK  +   E   +H     ++   KD    Y    FG+FGGR+IPETL+ AH+ELE AY  A +DP F EE+ +YRRE+IGGPTP+Y AKRLTE+MGGA++
Sbjct:  119 VALKNGIGMQDCINFVEAARAKGLTVPVVLMGYFNPFLAYGADKLIGAAAEAGIDGLIIVDLPPEEDEEFISKCNNAGLAFVPLITPTSTDERIAQLSDAAGSFLYCVSVTGVTGAKSADLKDLETFIGRVRKFTNKPLAVGFGIAKPEQVAEVSSLADGVVVGSAIVNTVLE---GTSTEDNAASLKAFTATLKDAVV--ERGAEHIAGGDVSEAAKDDLATYGDAHFGEFGGRFIPETLLRAHQELEAAYNEAMSDPEFIEEIKFYRREFIGGPTPLYLAKRLTEKMGGARI 407          
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Match: A0A8J5XVG6_DIALT (Tryptophan synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVG6_DIALT)

HSP 1 Score: 305 bits (781), Expect = 2.280e-95
Identity = 161/294 (54.76%), Postives = 204/294 (69.39%), Query Frame = 1
Query:   19 VSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDASEAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASAADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGL----------KAGITASEMSFKHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQV 870
            V+LADC+ +V++ARA GLT PVVLMGY NP LAYG   LMKD ++AG DGF+VVDL P+E   FV +CR ++L F+PLV+P +TD+R+  +A+ AD F+YCVS+ GVTGARA LP +L  F+ RVRA ++ PL+VGFGI+++  V E+A  ADGVVVGSA   AV+ V      ++I   L  F + L          KA    +E       +Q    +    +  +FG+FGGRYIPETLVEAHRELEEAY+ AK DPAFH EVA YR  YIGGPTPMYHAKRL+ EMGGAQ+
Sbjct:   80 VTLADCIGFVKKARAAGLTTPVVLMGYYNPLLAYGSAALMKDCADAGVDGFIVVDLPPEEGAPFVAECRKHKLCFVPLVTPASTDERIAQLATVADGFLYCVSLTGVTGARAELPKELPQFIKRVRANSNVPLAVGFGIATRAHVAEIATFADGVVVGSAVCKAVENVK---DVADIRPTLAAFVQSLLPDSAQTATAKAARPGAENEEGALAQQNAKIDESVKAAAHFGEFGGRYIPETLVEAHRELEEAYDKAKKDPAFHAEVAEYRARYIGGPTPMYHAKRLSAEMGGAQI 370          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1078.1042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB1_ECTSI1.550e-18894.14Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YTN0_9STRA2.760e-13970.89Tryptophan synthase n=1 Tax=Tribonema minus TaxID=... [more]
H6WB94_VAULI2.150e-13064.38Tryptophan synthase n=1 Tax=Vaucheria litorea TaxI... [more]
A0A7S2UWZ9_9STRA4.780e-11359.66Tryptophan synthase (Fragment) n=1 Tax=Fibrocapsa ... [more]
D8LQU8_ECTSI2.530e-11263.79Tryptophan synthase n=1 Tax=Ectocarpus siliculosus... [more]
W7TQB9_9STRA2.100e-10656.90Tryptophan synthase n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S4DAV4_HETAK1.810e-10257.97Tryptophan synthase n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S0XDP8_9STRA2.390e-9654.76Tryptophan synthase n=1 Tax=Chromulina nebulosa Ta... [more]
A0A7S1U774_9STRA1.380e-9554.42Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID... [more]
A0A8J5XVG6_DIALT2.280e-9554.76Tryptophan synthase n=1 Tax=Diacronema lutheri Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1078contigS-firma_F_contig1078:22614..25507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LLB1
Preferred nameTRP5
PFAMsPALP,Trp_syntA
Max annot lvl2759|Eukaryota
KEGG rclassRC00209,RC00210,RC00700,RC00701,RC02868
KEGG koko:K01694,ko:K01695,ko:K01696,ko:K10882,ko:K13222
KEGG ReactionR00674,R02340,R02722
KEGG Pathwayko00260,ko00400,ko00402,ko01100,ko01110,ko01130,ko01230,ko03440,ko03460,map00260,map00400,map00402,map01100,map01110,map01130,map01230,map03440,map03460
KEGG ModuleM00023
GOsGO:0000162,GO:0003674,GO:0003824,GO:0004834,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009606,GO:0009607,GO:0009617,GO:0009628,GO:0009629,GO:0009630,GO:0009651,GO:0009683,GO:0009684,GO:0009719,GO:0009725,GO:0009735,GO:0009850,GO:0009851,GO:0009941,GO:0009987,GO:0010033,GO:0010817,GO:0016020,GO:0016043,GO:0016053,GO:0016829,GO:0016830,GO:0016832,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0019904,GO:0031967,GO:0031975,GO:0032787,GO:0033036,GO:0033037,GO:0033554,GO:0033984,GO:0034641,GO:0034754,GO:0042221,GO:0042401,GO:0042430,GO:0042435,GO:0042445,GO:0042446,GO:0042545,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045229,GO:0046219,GO:0046394,GO:0046483,GO:0050896,GO:0051179,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0052386,GO:0052482,GO:0052542,GO:0052543,GO:0052544,GO:0052545,GO:0065007,GO:0065008,GO:0070727,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0098542,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Evalue2.53e-189
EggNOG OGsCOG0133@1|root,COG0159@1|root,KOG1395@2759|Eukaryota,KOG4175@2759|Eukaryota
EC4.1.2.8,4.2.1.20
Descriptiontryptophan synthase activity
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons5
Model size891
Cds size891
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1078.1042.1prot_S-firma_F_contig1078.1042.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1078 22614..25507 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.6548157-CDS-S-firma_F_contig1078:22613..227701622815619.6548157-CDS-S-firma_F_contig1078:22613..22770Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 22614..22770 +
1696949458.358602-CDS-S-firma_F_contig1078:22613..227701696949458.358602-CDS-S-firma_F_contig1078:22613..22770Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 22614..22770 +
1622815619.6726665-CDS-S-firma_F_contig1078:23160..233291622815619.6726665-CDS-S-firma_F_contig1078:23160..23329Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 23161..23329 +
1696949458.3735857-CDS-S-firma_F_contig1078:23160..233291696949458.3735857-CDS-S-firma_F_contig1078:23160..23329Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 23161..23329 +
1622815619.689202-CDS-S-firma_F_contig1078:23871..240641622815619.689202-CDS-S-firma_F_contig1078:23871..24064Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 23872..24064 +
1696949458.3858268-CDS-S-firma_F_contig1078:23871..240641696949458.3858268-CDS-S-firma_F_contig1078:23871..24064Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 23872..24064 +
1622815619.7020183-CDS-S-firma_F_contig1078:24605..248111622815619.7020183-CDS-S-firma_F_contig1078:24605..24811Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 24606..24811 +
1696949458.4005687-CDS-S-firma_F_contig1078:24605..248111696949458.4005687-CDS-S-firma_F_contig1078:24605..24811Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 24606..24811 +
1622815619.7140124-CDS-S-firma_F_contig1078:25341..255071622815619.7140124-CDS-S-firma_F_contig1078:25341..25507Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 25342..25507 +
1696949458.41041-CDS-S-firma_F_contig1078:25341..255071696949458.41041-CDS-S-firma_F_contig1078:25341..25507Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1078 25342..25507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1078.1042.1

>prot_S-firma_F_contig1078.1042.1 ID=prot_S-firma_F_contig1078.1042.1|Name=mRNA_S-firma_F_contig1078.1042.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=297bp
IALKNKVSLADCLDYVREARAKGLTAPVVLMGYLNPFLAYGLDKLMKDAS
EAGADGFVVVDLLPDEAHEFVTKCRANQLSFIPLVSPTTTDDRMPYVASA
ADSFVYCVSVAGVTGARAGLPADLKNFVGRVRAATDKPLSVGFGISSKEQ
VQEVAGIADGVVVGSAFMNAVDEVAADAPASEIAANLKKFTEGLKAGITA
SEMSFKHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEA
AKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQVRERFLL*
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mRNA from alignment at S-firma_F_contig1078:22614..25507+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1078.1042.1 ID=mRNA_S-firma_F_contig1078.1042.1|Name=mRNA_S-firma_F_contig1078.1042.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2894bp|location=Sequence derived from alignment at S-firma_F_contig1078:22614..25507+ (Sphaerotrichia firma ET2_F female)
ATCGCCTTGAAGAACAAGGTAAGCCTCGCGGACTGCCTCGACTACGTGAG AGAGGCCCGCGCGAAGGGCCTGACCGCCCCGGTGGTGCTCATGGGCTACC TCAACCCGTTCCTGGCCTACGGCCTGGACAAGCTCATGAAGGATGCGTCC GAGGCCGGTGAGCACTGAATGGGCGCCGTTATGAAGAGACACGTCCACAG TCATGCCGCGGGTCTGTGGAAGGCAGTATGTCGAGTCTGGCCTCCGTGCC CCCCCCCCCTGTGTTAGTTCCCATCTACTAAAGATGCTCCTCCGCTGTCT GTGTTCGCTGCTGTTGTCGATGCTACAAGGCCAAGATGCCGTTTTATTCA TGTGGCGAGTGCTGCCAGTATAACCTTGTTTTGGTCGAGGCGCTTGCGCT TCTCCCGACCTAAAACTATTCTCGCATTGTGTCGTGCTTCGTTTTTTTCG TTGCCCGTTCTTCTTGCCCCCCCCCCCCACCCCCGCCTTGCTGTTCCTCT TGTCGCGCAAAACACAAAAAATACCATCACTTGAAACAATCACCCAGGCG CCGACGGCTTTGTCGTGGTCGACCTCCTCCCCGACGAGGCTCACGAGTTC GTCACCAAGTGCCGCGCCAACCAGCTGTCCTTCATCCCGCTCGTGTCACC CACGACCACCGACGACCGCATGCCGTACGTGGCCTCGGCCGCGGACTCGT TCGTCTACTGCGTCAGGTCGGTCAGCCACAGAATCTTGACTCGGTCTAGC CGCGCCCGCAGGCAGAAAAGGGTGGAGCAAATTCTCAGCACAGTTTGCTT GAATCTGGGCACATGGAGGCATGGCGCCCTCCCACCCCATGTCTGCTGAA AGTGTTGTTCTGTACAAACAGCAGGCACCCAGCGGCAGGAAAAACAACAA CTGCTGGCGAGGGGCTTGACATTTGTTGTTGCCGGCGGATGGCCTGGCCT GGCTGGCCGCGGCCCTCTCTCGGCGGAATTACTAACTGGTTTTTTTTGGC GCTAATTATAGGCAATCAAGGGTTGTCTATGTCGCCAGGACTCTGTCCCG TCAAGGGCTGGCGGCGAGCTTGAGTGTTCACACACAAACATCTATAGTGC CAAAAAAACAAGCGAACAAGCCAGAGCTTTTGCGGACATCTGCAGTGTCC GAGTAACCTTCACCTATGATAGTTCGTGCAACCTTTGCTCATTTTGTTTG TTTCAAAACACAAAACACGCACACGCGCGCGCCCGATCATAAACAAACAA AATCACAGCGTGGCCGGTGTGACAGGCGCACGGGCCGGCCTGCCCGCCGA CCTCAAGAACTTCGTGGGCCGCGTACGCGCGGCAACAGACAAGCCTCTTT CGGTGGGCTTCGGCATCAGCTCCAAGGAGCAGGTCCAGGAGGTAGCCGGT ATCGCGGACGGGGTCGTCGTGGGTTCGGCTTTCATGAACGCTGTCGATGA GGTGAATATGTAAATATGCCTAAATAGTCGCGGGGGGGGGTGGCTGTTGA CCGGGGAGCGTCCAGGATGAACAGCACCTGCTTTTATTCGGGGGGCGTTT TTTTCTTGCGCTTGCGAGCGGGACGTTGGAATGTGGTAGGCACGAGAGCT TTTGTACATACATATGTACCTCTGCTGTAGTCTTTGCTTTGGTTAGTCAA CAGTGCGATGGTGTCTTGGTCATGGCACGCGGAACCTTTCCGAGGGCTTA GGGGCGTCGAAAAGTAGGTGCGTTTTTTTATCGATGGAGGGTCGCCCACG CGAGCCCGCCCCCGGGTGGTTGTGTTGTTAGTGCTTTTTTGGAGGTGCCT GCCGCTGCTCTGCGTTCGTTAAACCGTACCATACTTACTCTCCACCTTTT ACTCTCTAGTCAATGTGTGATGCCGAACATTCCGTCCGCTTTTTGTTGCA CTGCGCGCTGCGCTGACTTTTTTCTGCCGTGCACTGCTGCTGCTGCTGCT GCTGCTGCTGGTGAACCAATGGTTTGCTGTTCTACACGGCAGGTGGCCGC AGACGCTCCCGCCTCGGAGATCGCGGCGAACCTCAAGAAGTTCACAGAGG GCCTCAAGGCCGGCATCACGGCGTCCGAGATGTCCTTCAAGCACACCGGC GAGCAGGGGCTGGCGTACGAGGGGAAGGACGTGTCCGGCGGCTACTTCGG GGACTTCGGGGGACGGTACATCCCGGAAACCCTGGTTGAGGCGCACAGGT TAGACTAGTTGCCGCCACATATGTATCTGGAACGCTGTCTGGGTTGAAGT AAGGTGGGTTCGAGTGCTGCCCTCTGTCGGATAGTGCAGGGTTCCACGGC TTTTGTCAAGTCAACTGTCACTTGCCGGCCTAGTCTAGCCAGGTTTATTC TCCGATCCCACCCCGTCTTTCGCTGCCCGGGCGGGGAGCGCTGAGCGTGA GCAAAGGATTGTCGCGGAGGGTGTTTGGGGAGCTTGTTGTTGAGAGCGGG AAGGAAGGTGTGGGTGATCCAGGGGGAAGAGTCTTTTTTTTTTTTGTCTT TTTGTTTCCTTTGTGGACGGCCCTCTGCCTACCTCGTCTTGATCTCTCTT GTTTTGTGAGCGTCAACCAGAGGCCCCGCGTTCTGTGCTGGTGTGTTTGT GTTCGTGTCTCCCTCTTTCTTGCCGTTGTTGTTCGTTGCTGATTTGACTG ATATGTTGGGCCTGTTTGCCCTGCCCTTGTTGCTTTTAACAAATACGCCG TTCGTGATGTCTCCACTACCGCCGGCAGGGAGTTGGAGGAGGCCTACGAG GCCGCCAAGGCCGATCCGGCGTTCCACGAGGAGGTGGCCTGGTACCGCCG GGAGTACATCGGCGGCCCCACCCCCATGTACCACGCCAAGCGCCTGACAG AGGAGATGGGTGGTGCTCAGGTGCGTGAAAGGTTCCTGCTGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig1078:22614..25507+

>mRNA_S-firma_F_contig1078.1042.1 ID=mRNA_S-firma_F_contig1078.1042.1|Name=mRNA_S-firma_F_contig1078.1042.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1782bp|location=Sequence derived from alignment at S-firma_F_contig1078:22614..25507+ (Sphaerotrichia firma ET2_F female)
ATCGCCTTGAAGAACAAGGTAAGCCTCGCGGACTGCCTCGACTACGTGAG
AGAGGCCCGCGCGAAGGGCCTGACCGCCCCGGTGGTGCTCATGGGCTACC
TCAACCCGTTCCTGGCCTACGGCCTGGACAAGCTCATGAAGGATGCGTCC
GAGGCCGATCGCCTTGAAGAACAAGGTAAGCCTCGCGGACTGCCTCGACT
ACGTGAGAGAGGCCCGCGCGAAGGGCCTGACCGCCCCGGTGGTGCTCATG
GGCTACCTCAACCCGTTCCTGGCCTACGGCCTGGACAAGCTCATGAAGGA
TGCGTCCGAGGCCGGCGCCGACGGCTTTGTCGTGGTCGACCTCCTCCCCG
ACGAGGCTCACGAGTTCGTCACCAAGTGCCGCGCCAACCAGCTGTCCTTC
ATCCCGCTCGTGTCACCCACGACCACCGACGACCGCATGCCGTACGTGGC
CTCGGCCGCGGACTCGTTCGTCTACTGCGTCAGGCGCCGACGGCTTTGTC
GTGGTCGACCTCCTCCCCGACGAGGCTCACGAGTTCGTCACCAAGTGCCG
CGCCAACCAGCTGTCCTTCATCCCGCTCGTGTCACCCACGACCACCGACG
ACCGCATGCCGTACGTGGCCTCGGCCGCGGACTCGTTCGTCTACTGCGTC
AGCGTGGCCGGTGTGACAGGCGCACGGGCCGGCCTGCCCGCCGACCTCAA
GAACTTCGTGGGCCGCGTACGCGCGGCAACAGACAAGCCTCTTTCGGTGG
GCTTCGGCATCAGCTCCAAGGAGCAGGTCCAGGAGGTAGCCGGTATCGCG
GACGGGGTCGTCGTGGGTTCGGCTTTCATGAACGCTGTCGATGAGCGTGG
CCGGTGTGACAGGCGCACGGGCCGGCCTGCCCGCCGACCTCAAGAACTTC
GTGGGCCGCGTACGCGCGGCAACAGACAAGCCTCTTTCGGTGGGCTTCGG
CATCAGCTCCAAGGAGCAGGTCCAGGAGGTAGCCGGTATCGCGGACGGGG
TCGTCGTGGGTTCGGCTTTCATGAACGCTGTCGATGAGGTGGCCGCAGAC
GCTCCCGCCTCGGAGATCGCGGCGAACCTCAAGAAGTTCACAGAGGGCCT
CAAGGCCGGCATCACGGCGTCCGAGATGTCCTTCAAGCACACCGGCGAGC
AGGGGCTGGCGTACGAGGGGAAGGACGTGTCCGGCGGCTACTTCGGGGAC
TTCGGGGGACGGTACATCCCGGAAACCCTGGTTGAGGCGCACAGGTGGCC
GCAGACGCTCCCGCCTCGGAGATCGCGGCGAACCTCAAGAAGTTCACAGA
GGGCCTCAAGGCCGGCATCACGGCGTCCGAGATGTCCTTCAAGCACACCG
GCGAGCAGGGGCTGGCGTACGAGGGGAAGGACGTGTCCGGCGGCTACTTC
GGGGACTTCGGGGGACGGTACATCCCGGAAACCCTGGTTGAGGCGCACAG
GGAGTTGGAGGAGGCCTACGAGGCCGCCAAGGCCGATCCGGCGTTCCACG
AGGAGGTGGCCTGGTACCGCCGGGAGTACATCGGCGGCCCCACCCCCATG
TACCACGCCAAGCGCCTGACAGAGGAGATGGGTGGTGCTCAGGTGCGTGA
AAGGTTCCTGCTGTGAGGAGTTGGAGGAGGCCTACGAGGCCGCCAAGGCC
GATCCGGCGTTCCACGAGGAGGTGGCCTGGTACCGCCGGGAGTACATCGG
CGGCCCCACCCCCATGTACCACGCCAAGCGCCTGACAGAGGAGATGGGTG
GTGCTCAGGTGCGTGAAAGGTTCCTGCTGTGA
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