mRNA_S-firma_F_contig10762.1024.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: D8LMX2_ECTSI (Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX2_ECTSI) HSP 1 Score: 124 bits (312), Expect = 1.930e-31 Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSE 234
DGMIIPARARKKRRLDEELEGLLEAME KRKALVAVDGKL +AESRA K+EEMKGLERTLVQVLVEQQKKLLSLLSE
Sbjct: 2158 DGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLGGLAESRAEKEEEMKGLERTLVQVLVEQQKKLLSLLSE 2235
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A1W0A416_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A416_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.070e-12 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLS 231
DG + A+ +KRRL +E E +LE +ETK+ + +D KL ++ S+ K+EEMKGLER LVQ+LVEQQK+LLSL++
Sbjct: 1841 DGHVNQAQVARKRRLHQESEMMLETIETKKTKIRGIDAKLQELHGSQRAKEEEMKGLERQLVQILVEQQKQLLSLIT 1917
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A6G0XV59_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV59_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.000e-11 Identity = 38/77 (49.35%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLS 231
DG + A+ +KRR+ +E+E +LE++ETKR + VD KL D+ + K++EMK LER LVQ+LVEQQK+LL+L++
Sbjct: 1834 DGHVNQAQVARKRRMHQEMEAMLESIETKRTKVRTVDAKLQDLHKLHKQKEDEMKNLERQLVQILVEQQKQLLALVT 1910
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A7S2G7M7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7M7_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.400e-11 Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSE 234
+G + A ARKK+RLDEE E LL+ M KR + +D K++ AE R K++ +K LER +V+VLV+QQKKLL++L++
Sbjct: 93 EGRVNVAHARKKKRLDEEYENLLQIMHKKRDDISVLDKKIAACAERRQDKEDALKDLERQIVEVLVDQQKKLLAILTD 170
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A835YVZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.710e-11 Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLL 228
DG + A R++RRLDEELE L A+E +R + A D +L+ + E+R K+ EM+ LER LV VLV+QQK+LLS+L
Sbjct: 1092 DGRVSAAHQRRRRRLDEELEEALRALEGRRAEVAAADARLAQLGEARIAKEGEMQALERELVGVLVDQQKRLLSIL 1167
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A397EIE3_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EIE3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.010e-10 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEV 237
DG + A+ +KRR+ +E+E +LE +ETKR + ++ K ++ K++EMKGLER LVQ+LVEQQK+LL+L++ V
Sbjct: 293 DGHVNQAQVARKRRMHQEMEAMLEGIETKRTRVRTIETKQQELQSLHKQKEDEMKGLERQLVQILVEQQKQLLTLVTSV 371
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A3R7VZ71_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7VZ71_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.160e-10 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEV 237
DG + A+ +KRR+ +E+E +LE +ETKR + ++ K ++ K++EMKGLER LVQ+LVEQQK+LL+L++ V
Sbjct: 391 DGHVNQAQVARKRRMHQEMEAMLEGIETKRTRVRTIETKQQELQSLHKQKEDEMKGLERQLVQILVEQQKQLLTLVTSV 469
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A397BQY7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BQY7_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.220e-10 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEV 237
DG + A+ +KRR+ +E+E +LE +ETKR + ++ K ++ K++EMKGLER LVQ+LVEQQK+LL+L++ V
Sbjct: 582 DGHVNQAQVARKRRMHQEMEAMLEGIETKRTRVRTIETKQQELQSLHKQKEDEMKGLERQLVQILVEQQKQLLTLVTSV 660
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: W4H4I1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4I1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.320e-10 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEV 237
DG + A+ +KRR+ +E+E +LE +ETKR + ++ K ++ K++EMKGLER LVQ+LVEQQK+LL+L++ V
Sbjct: 1905 DGHVNQAQVARKRRMHQEMEAMLEGIETKRTRVRTIETKQQELQSLHKQKEDEMKGLERQLVQILVEQQKQLLTLVTSV 1983
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Match: A0A1V9YN76_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN76_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.530e-10 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 DGMIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEV 237
DG + A+ +KRRL +E E +LE ++TK+ + ++ KL ++ + K++EMK LER LVQ+LVEQQK+LLSL++ V
Sbjct: 1866 DGHVNQAQVARKRRLHQETEAMLETIDTKKAQIRGIESKLQELYSLQRAKEDEMKSLERHLVQILVEQQKQLLSLVTAV 1944 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10762.1024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10762.1024.1 >prot_S-firma_F_contig10762.1024.1 ID=prot_S-firma_F_contig10762.1024.1|Name=mRNA_S-firma_F_contig10762.1024.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=77bp MIIPARARKKRRLDEELEGLLEAMETKRKALVAVDGKLSDVAESRAVKDEback to top mRNA from alignment at S-firma_F_contig10762:129..635+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10762.1024.1 ID=mRNA_S-firma_F_contig10762.1024.1|Name=mRNA_S-firma_F_contig10762.1024.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=507bp|location=Sequence derived from alignment at S-firma_F_contig10762:129..635+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10762:129..635+ >mRNA_S-firma_F_contig10762.1024.1 ID=mRNA_S-firma_F_contig10762.1024.1|Name=mRNA_S-firma_F_contig10762.1024.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=462bp|location=Sequence derived from alignment at S-firma_F_contig10762:129..635+ (Sphaerotrichia firma ET2_F female)back to top |