|
|
Homology
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: D7G7J8_ECTSI (Nucleolar complex associated 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7J8_ECTSI) HSP 1 Score: 557 bits (1435), Expect = 2.070e-180 Identity = 429/545 (78.72%), Postives = 446/545 (81.83%), Query Frame = 1
Query: 658 AMDLKGLAETDPEFFSFLQKEEPTLLEFDPMDSDDXXXXXXXXXSGAVK-------EAEAEGGVGSAKSAAALLREASKGGGVPLTMALLEAMRQEAFDRKSIQGVRRMIKAFRCGCHLGDESSEAKGGXXXXXXAVQQKFRIPSSEVYNELMVCSLEGLHVAFMRLLFPDREPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTKEDFRAAALLPAWKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKASLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAAPGEDELRTLIFPLAQ 2271
AMDLKGLAETDPEF+SFLQKEEPTLLEFDPMDSD XXXXXXXXX EA AE + KS AALLREASKGGGVPLTM LL+AMRQEAFDR SIQGVRRMIKAFRCGCHLGDE++E K G VQQKFRIPSSEVYNELMVCSLEGLH AFM LLFP RE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LTKEDFRAAALLPAWKP+QPALYSFFKSLLHVL+EL DRALL+FLLSRLEHY+PLLVPFPGLARGFLK LLGLWGGAGAEAKS AERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQ+GK SLR+MEGCVVELYGM+VGSAYQNAFLYIRQLSLLLRRAMQH+T+D+VQ+VRRWQVVTCLRVWTGVLAAAPGEDELR LIFPLAQ
Sbjct: 125 AMDLKGLAETDPEFYSFLQKEEPTLLEFDPMDSDXXXXXXXXXXXXXXXXXXXXXXEAGAE--TTTTKSTAALLREASKGGGVPLTMPLLKAMRQEAFDRTSIQGVRRMIKAFRCGCHLGDEAAEGKAGSGGGGSGVQQKFRIPSSEVYNELMVCSLEGLHSAFMHLLFPGRESKTAAEPPVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALARGRSRVAAAV--------------------------ILTKEDFRAAALLPAWKPIQPALYSFFKSLLHVLDELHDRALLSFLLSRLEHYVPLLVPFPGLARGFLKTLLGLWGGAGAEAKSSGGGTEQEGEEAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQSGKVSLRVMEGCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHRTKDSVQAVRRWQVVTCLRVWTGVLAAAPGEDELRMLIFPLAQ 641
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: A0A835Z799_9STRA (Noc2p family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z799_9STRA) HSP 1 Score: 216 bits (549), Expect = 3.830e-54 Identity = 192/611 (31.42%), Postives = 262/611 (42.88%), Query Frame = 1
Query: 658 AMDLKGLAETDPEFFSFLQKEEPTLLEFDPMDSDDXXXXXXXXXSGAVKEAEAEGGVGSAKSAAALLREASKGG---GVPLTMALLEAMRQEAFDRKSIQGVRRMIKAFRCGCHLGDESSEAKGGXXXXXX------------------------------------------AVQQKFRIPSSEVYNELMVCSLEGLHVAFMRLLFPDREPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTKEDFRAAALLPAWKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRL------------------YLAFAKRARAPPASQAGKASLRLMEGCVVELYGMEVGSAYQN-----------AFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAAPGEDELRTLIFPLA 2268
A +L+ L+E DPEF+ +LQ EEP LLEFDP + + EAE EGG + +KGG G+ LT A L A+++ AF R+S++G++R++ FR GCH+G+E++ ++ XXXXXX A+ ++F+IP+ ++YNELMV L H AFM FPD+ XXXXXXXXXX LTK DF AA P+W+ +QP LY+F K++ HVL +LKDR LLAF+L L+HY LLVPF LAR +LKA+LGLW G A +++LA+LRVR+MA PFPFV YLA+A+ R ++ ++ C+VELYGM++ SAYQ AF+Y+RQL+L LR+A+ K+ DAV V+RWQ CLR+W VLAA PGE++LR L+ PLA
Sbjct: 74 ARELRELSEKDPEFYQYLQAEEPDLLEFDPKELEVSD-----------NEAEGEGGXXXXXXXXXXXKGKAKGGSEEGMVLTKASLRALQEAAFVRRSLKGLKRLLLVFRAGCHIGEEAAVSRASXXXXXXXXXXXXXSEEGVKQXXXXXXXXXXXXXXADDGDGDAGRGGDRALARRFKIPTGDLYNELMVSCLSNAHRAFMFHTFPDQVQAALSLAERDIAKEEXXXXXXXXXXTNEAGKARKRKGKAGETAAAASRQVRLQAAKEARVGAIR--------------------------------------------------------------------------------LTKADFAVAAKRPSWRAIQPMLYAFLKAVAHVLTQLKDRDLLAFVLRALQHYTKLLVPFQSLARRYLKAMLGLW--EGGAAGGTVSDDAAAQAKESTLQVLAFLRVREMAENQPFPFVXXXXXXXXXXXXXXXXXXXXXXXXXYLAYARNCRF--VNEQTLPAITFRGNCIVELYGMDLASAYQXXXXXXXXXXXAAFVYVRQLALHLRQAIIKKSADAVAEVQRWQYCACLRLWAAVLAAYPGEEQLRALVHPLA 589
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: W7T2Z2_9STRA (Uncharacterized protein family UPF0120 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Z2_9STRA) HSP 1 Score: 173 bits (439), Expect = 9.100e-41 Identity = 102/225 (45.33%), Postives = 144/225 (64.00%), Query Frame = 1
Query: 1621 LPAWKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKASLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAA----PGED----ELRTLIFPLAQ 2271
LPA++ ++PALY K+L ++L ++ + +LL F LSRLE ++P LV FP LA+ +L+ LL LW A +EA V+L+A+LRVRQ A LPFPF+E C+K YL++A+ A+ S+A L LM +VELYG+++ SAYQ+AF+Y+RQL+L LR A KT +A+Q V+ WQ + C +VW VL A PG D +LR L+FPLAQ
Sbjct: 347 LPAFRSLRPALYRSLKALHYLLGQITEPSLLTFTLSRLERFLPFLVLFPRLAKFYLRTLLSLW--AASEALD--------------VKLVAFLRVRQAATVLPFPFLEHCLKGAYLSYARNAKF--VSEASLPGLTLMGNGLVELYGLDLASAYQHAFVYVRQLALHLRAAYTKKTPEALQKVQCWQYLNCCKVWVAVLTAHVAPDPGSDKAPSQLRELVFPLAQ 553
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: B7FQ14_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ14_PHATC) HSP 1 Score: 172 bits (437), Expect = 9.960e-41 Identity = 98/219 (44.75%), Postives = 139/219 (63.47%), Query Frame = 1
Query: 1630 WKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKA--SLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLA-AAPGEDE--LRTLIFPLAQ 2271
W ++P + SFF+S LHVL+E K+ L+ ++ L YIP L F +A G LKAL LW ++ + VRL A+ R+RQ+A PFPFVE C+K++YLA+A+RA+ +S A A +L M C+VELY ++ S+YQ+AF+YIRQL+LLLR AMQ KT+++ Q V WQ V CL++W VL+ AAP +D +R+LIFPL +
Sbjct: 314 WDNIRPIILSFFRSTLHVLDEAKEPELVTVIVKALSKYIPFLSAFERIAEGMLKALTALWSAPLDSSEDY-----------QVVRLNAFFRIRQLALTQPFPFVETCLKKIYLAYARRAKLGVSSSATTAMPTLTFMGNCLVELYSLDYHSSYQHAFVYIRQLALLLRAAMQKKTKESFQQVFCWQYVHCLKLWVAVLSQAAPTDDGAMMRSLIFPLTE 521
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: A0A448Z9V8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9V8_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.830e-40 Identity = 97/228 (42.54%), Postives = 134/228 (58.77%), Query Frame = 1
Query: 1630 WKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKA--SLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAAPGEDE------------LRTLIFPLAQ 2271
W + P LY+FFK+ H+L E K+ L+ F+L L YIP + P+P LA LK L LW ++ + VRL A+LR+RQ+A PFPF+E C+K+LYLA+A+RA+ AS A +L M CVVELY ++ S+YQ+AF+YIRQL+L LR AMQ KT +A+ ++ WQ + CL++W VL A D+ LR+LIFPL Q
Sbjct: 348 WNDLNPILYTFFKATAHILTEAKESQLVVFVLKALFEYIPYMTPYPRLAETMLKTLTSLWSAPIDSSEDY-----------QVVRLHAFLRIRQLAMTQPFPFIEECLKKLYLAYAQRAKFATASSVTSALPTLTFMGNCVVELYSLDYHSSYQHAFIYIRQLALHLRTAMQKKTPEAMGAIYCWQFLHCLKLWVAVLTEACQSDDDSDVLGSNEDQLLRSLIFPLTQ 564
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: A0A7S1D2V9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2V9_CYCTE) HSP 1 Score: 161 bits (407), Expect = 8.550e-40 Identity = 96/226 (42.48%), Postives = 132/226 (58.41%), Query Frame = 1
Query: 1630 WKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKA--SLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAA---PGEDE---------LRTLIFPL 2265
WK ++ + +FF + LHVL K+ LL F+L L Y+PLL PFP +A+ LK LW ++ + VRL A+LR+RQMA PFPF+E C+K+ YLA+AKRA+ ++ A +L M CVVELY ++ S+YQ+AF+YIRQL+L LR AMQ KT +A Q V WQ + CL++W VL +A ED+ L +LIFPL
Sbjct: 132 WKDLRSIMRTFFLATLHVLSAAKEPELLTFVLKALAKYVPLLTPFPKIAQQMLKMFTSLWSAPLDSSEDY-----------QVVRLNAFLRIRQMAVTQPFPFIEDCLKKTYLAYAKRAKFGTSATATSVLPTLTFMGNCVVELYTLDYHSSYQHAFVYIRQLALHLRSAMQKKTPEAFQVVYCWQYIHCLKLWVAVLTSACKMSKEDDSGRSDEIQLLESLIFPL 346
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: A0A1E7FSB6_9STRA (Noc2-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSB6_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.510e-39 Identity = 99/231 (42.86%), Postives = 133/231 (57.58%), Query Frame = 1
Query: 1630 WKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKA--SLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAAPGEDE---------------LRTLIFPLAQ 2271
W P L++FFKS H+L E K+ L+ F+L L YIP + PFP LA LK L LW ++ + VRL A+LR+RQ+A PFPF+E C+K+LYLA+A+RA+ AS A +L M CVVELY ++ S+YQ+AF+YIRQL+L LR AMQ KT +A+ +V WQ + CL++W VL A D+ LR+LIFPL Q
Sbjct: 287 WNDFSPILFTFFKSTTHILSEAKEPELVVFVLKALFDYIPYMTPFPRLAETMLKILTTLWSAPIDSSEDY-----------QVVRLHAFLRIRQLAMTQPFPFIEECLKKLYLAYAQRAKFATASSVTSALPTLTFMGNCVVELYSLDYHSSYQHAFIYIRQLALHLRTAMQRKTPEAMGAVYCWQFLHCLKLWVAVLTEACQVDDDMEGNYISNNTEDQLLRSLIFPLTQ 506
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: A0A7S4MG20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MG20_9STRA) HSP 1 Score: 158 bits (399), Expect = 7.010e-37 Identity = 93/230 (40.43%), Postives = 136/230 (59.13%), Query Frame = 1
Query: 1630 WKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKA--SLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAAPGE-----------DE---LRTLIFPLAQ 2271
W ++ L F +S LH+L E K+ ALL+F+L L Y+PLL PFP LA+ FL+ L LW ++ + VRL ++LRVRQ+A PFPFVE C+K YL +A+RA+ A+ A +L M CVVELY ++ S+Y++AF+YIRQL+L LR A+Q +T ++++ V WQ V CLR+W VL+AA DE +++L++PL +
Sbjct: 220 WDELRTYLQLFLRSSLHLLSEAKEPALLSFVLKSLSPYVPLLTPFPKLAKSFLQTLSKLWSAPLDTSEEY-----------QVVRLRSFLRVRQLAVTQPFPFVEDCLKSSYLCYARRAKFGTAASVHSALPTLTFMGNCVVELYSLDYASSYRHAFVYIRQLALHLRTALQRRTPESLRVVYCWQYVHCLRLWAAVLSAACASATRGXXXXXXXDEAKLMKSLVYPLTE 438
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: A0A7S2S7C6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7C6_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.400e-36 Identity = 91/230 (39.57%), Postives = 133/230 (57.83%), Query Frame = 1
Query: 1630 WKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKA--SLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAA----PGE----------DELRTLIFPLAQ 2271
W ++P + S S+L++LE+ K+ L F+L Y+ L+ FP + +GFLK L LW + + VRL A+LR+RQ+A PFPF+E C+K YLA+AKRA+ A+ +L M CVVELY ++ S+YQ+AF+YIRQL+L LR A+Q KT D+ + V WQ + CL++WT VLA+A PGE + LR+L++PL +
Sbjct: 324 WPKLKPVIKSLLTSILYLLEQAKETKLQTFILKSFSKYVQYLIAFPRILKGFLKTLTSLWSATNDSSPDY-----------QVVRLNAFLRIRQLAVTQPFPFIEQCLKSSYLAYAKRAKFANAATVTTLLPTLTFMGNCVVELYSLDFASSYQHAFVYIRQLALHLRTALQKKTPDSFRVVYCWQYIHCLKLWTAVLASACSRVPGETPTKANEEETELLRSLVYPLTE 542
BLAST of mRNA_S-firma_F_contig1075.1013.1 vs. uniprot
Match: A0A1Z5J7C2_FISSO (Nucleolar complex protein 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7C2_FISSO) HSP 1 Score: 158 bits (400), Expect = 3.980e-36 Identity = 90/218 (41.28%), Postives = 129/218 (59.17%), Query Frame = 1
Query: 1630 WKPMQPALYSFFKSLLHVLEELKDRALLAFLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSXXXXXXXXXXXAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGKA--SLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQSVRRWQVVTCLRVWTGVLAAAPGEDE--LRTLIFPLAQ 2271
W ++P + SFFKS LHV+ E K+ LL F+L L L PFP LA LK L LW ++ + VRL A+LR+RQ+A PFPF+E +K+ YLA+AKRA+ + +L M C+ ELY ++ S+YQ+AF+YIRQL+LLLR AM KT++A+Q V WQ + CL++W VL + E++ +R+LI+PL +
Sbjct: 329 WPQLRPIIQSFFKSTLHVMSEAKEPDLLVFVLRALAKLNRYLTPFPRLASAMLKCLTALWSAPLDTSEKY-----------QVVRLNAFLRIRQLALTQPFPFIEDILKKTYLAYAKRAKFGTGASVSSVLPTLTFMGNCLCELYSLDHHSSYQHAFVYIRQLALLLRTAMYKKTKEAMQQVYHWQYLHCLKLWVAVLCDSTIEEDSLMRSLIYPLTE 535
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G7J8 |
| PFAMs | Noc2 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K14833 |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0008150,GO:0022613,GO:0030684,GO:0030686,GO:0030687,GO:0030689,GO:0030690,GO:0030691,GO:0031974,GO:0031981,GO:0032991,GO:0042254,GO:0042273,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071840,GO:1990904 |
| Evalue | 2.48e-184 |
| EggNOG OGs | COG5604@1|root,KOG2256@2759|Eukaryota |
| Ec32 ortholog description | nucleolar complex associated 2 homolog |
| Ec32 ortholog | Ec-22_002150.1 |
| Description | ribosomal large subunit biogenesis |
| COG category | L |
| BRITE | ko00000,ko03009 |
| Hectar predicted targeting category | other localisation |
| Exons | 16 |
| Model size | 2959 |
| Cds size | 2226 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815616.8696294-UTR-S-firma_F_contig1075:13774..13840 | 1622815616.8696294-UTR-S-firma_F_contig1075:13774..13840 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 13775..13840 + |
| 1696949456.5642583-UTR-S-firma_F_contig1075:13774..13840 | 1696949456.5642583-UTR-S-firma_F_contig1075:13774..13840 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 13775..13840 + |
| 1622815617.034675-UTR-S-firma_F_contig1075:22148..22158 | 1622815617.034675-UTR-S-firma_F_contig1075:22148..22158 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 22149..22158 + |
| 1696949456.690094-UTR-S-firma_F_contig1075:22148..22158 | 1696949456.690094-UTR-S-firma_F_contig1075:22148..22158 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 22149..22158 + |
| 1622815617.046943-UTR-S-firma_F_contig1075:22601..22763 | 1622815617.046943-UTR-S-firma_F_contig1075:22601..22763 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 22602..22763 + |
| 1696949456.699864-UTR-S-firma_F_contig1075:22601..22763 | 1696949456.699864-UTR-S-firma_F_contig1075:22601..22763 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 22602..22763 + |
| 1622815617.0581143-UTR-S-firma_F_contig1075:23749..23872 | 1622815617.0581143-UTR-S-firma_F_contig1075:23749..23872 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 23750..23872 + |
| 1696949456.708572-UTR-S-firma_F_contig1075:23749..23872 | 1696949456.708572-UTR-S-firma_F_contig1075:23749..23872 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 23750..23872 + |
| 1622815617.0718434-UTR-S-firma_F_contig1075:24030..24120 | 1622815617.0718434-UTR-S-firma_F_contig1075:24030..24120 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 24031..24120 + |
| 1696949456.717273-UTR-S-firma_F_contig1075:24030..24120 | 1696949456.717273-UTR-S-firma_F_contig1075:24030..24120 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 24031..24120 + |
| 1622815617.086034-UTR-S-firma_F_contig1075:24554..24689 | 1622815617.086034-UTR-S-firma_F_contig1075:24554..24689 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 24555..24689 + |
| 1696949456.725966-UTR-S-firma_F_contig1075:24554..24689 | 1696949456.725966-UTR-S-firma_F_contig1075:24554..24689 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 24555..24689 + |
| 1622815617.0991838-UTR-S-firma_F_contig1075:25052..25199 | 1622815617.0991838-UTR-S-firma_F_contig1075:25052..25199 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 25053..25199 + |
| 1696949456.735472-UTR-S-firma_F_contig1075:25052..25199 | 1696949456.735472-UTR-S-firma_F_contig1075:25052..25199 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1075 25053..25199 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815616.8809438-CDS-S-firma_F_contig1075:13840..14123 | 1622815616.8809438-CDS-S-firma_F_contig1075:13840..14123 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 13841..14123 + |
| 1696949456.5763094-CDS-S-firma_F_contig1075:13840..14123 | 1696949456.5763094-CDS-S-firma_F_contig1075:13840..14123 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 13841..14123 + |
| 1622815616.8931148-CDS-S-firma_F_contig1075:14990..15227 | 1622815616.8931148-CDS-S-firma_F_contig1075:14990..15227 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 14991..15227 + |
| 1696949456.5861652-CDS-S-firma_F_contig1075:14990..15227 | 1696949456.5861652-CDS-S-firma_F_contig1075:14990..15227 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 14991..15227 + |
| 1622815616.9060686-CDS-S-firma_F_contig1075:15881..16009 | 1622815616.9060686-CDS-S-firma_F_contig1075:15881..16009 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 15882..16009 + |
| 1696949456.5964978-CDS-S-firma_F_contig1075:15881..16009 | 1696949456.5964978-CDS-S-firma_F_contig1075:15881..16009 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 15882..16009 + |
| 1622815616.92239-CDS-S-firma_F_contig1075:16780..16938 | 1622815616.92239-CDS-S-firma_F_contig1075:16780..16938 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 16781..16938 + |
| 1696949456.6063092-CDS-S-firma_F_contig1075:16780..16938 | 1696949456.6063092-CDS-S-firma_F_contig1075:16780..16938 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 16781..16938 + |
| 1622815616.937157-CDS-S-firma_F_contig1075:17406..17528 | 1622815616.937157-CDS-S-firma_F_contig1075:17406..17528 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 17407..17528 + |
| 1696949456.617502-CDS-S-firma_F_contig1075:17406..17528 | 1696949456.617502-CDS-S-firma_F_contig1075:17406..17528 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 17407..17528 + |
| 1622815616.9472668-CDS-S-firma_F_contig1075:18045..18146 | 1622815616.9472668-CDS-S-firma_F_contig1075:18045..18146 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 18046..18146 + |
| 1696949456.6255713-CDS-S-firma_F_contig1075:18045..18146 | 1696949456.6255713-CDS-S-firma_F_contig1075:18045..18146 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 18046..18146 + |
| 1622815616.961619-CDS-S-firma_F_contig1075:18459..19031 | 1622815616.961619-CDS-S-firma_F_contig1075:18459..19031 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 18460..19031 + |
| 1696949456.6338542-CDS-S-firma_F_contig1075:18459..19031 | 1696949456.6338542-CDS-S-firma_F_contig1075:18459..19031 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 18460..19031 + |
| 1622815616.9711769-CDS-S-firma_F_contig1075:19359..19570 | 1622815616.9711769-CDS-S-firma_F_contig1075:19359..19570 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 19360..19570 + |
| 1696949456.6433957-CDS-S-firma_F_contig1075:19359..19570 | 1696949456.6433957-CDS-S-firma_F_contig1075:19359..19570 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 19360..19570 + |
| 1622815616.9863124-CDS-S-firma_F_contig1075:20705..20866 | 1622815616.9863124-CDS-S-firma_F_contig1075:20705..20866 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 20706..20866 + |
| 1696949456.6563573-CDS-S-firma_F_contig1075:20705..20866 | 1696949456.6563573-CDS-S-firma_F_contig1075:20705..20866 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 20706..20866 + |
| 1622815617.0020041-CDS-S-firma_F_contig1075:21392..21534 | 1622815617.0020041-CDS-S-firma_F_contig1075:21392..21534 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 21393..21534 + |
| 1696949456.6677752-CDS-S-firma_F_contig1075:21392..21534 | 1696949456.6677752-CDS-S-firma_F_contig1075:21392..21534 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 21393..21534 + |
| 1622815617.0211809-CDS-S-firma_F_contig1075:22037..22148 | 1622815617.0211809-CDS-S-firma_F_contig1075:22037..22148 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 22038..22148 + |
| 1696949456.6790843-CDS-S-firma_F_contig1075:22037..22148 | 1696949456.6790843-CDS-S-firma_F_contig1075:22037..22148 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1075 22038..22148 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1075.1013.1 >prot_S-firma_F_contig1075.1013.1 ID=prot_S-firma_F_contig1075.1013.1|Name=mRNA_S-firma_F_contig1075.1013.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=742bp
MPAAKGRNRKARRATAAAAAPSSTGSPEDCSPSKLVGVAAPAGQEKRRRQ KQRQEQLEERDAAATTASTASTGSSSKGEGVGRKSKNDSGGGVGAKKKSE NAGATFDVVVGGGGGGGGNIADLDADDFLSGGFMSMAGLSDEDEDEDEGG DGDKQEASGGGSEGDGDNDDSGEGGGGVVGEDDEGSADSDDEEANANAMD LKGLAETDPEFFSFLQKEEPTLLEFDPMDSDDSEDEDGEGGSGAVKEAEA EGGVGSAKSAAALLREASKGGGVPLTMALLEAMRQEAFDRKSIQGVRRMI KAFRCGCHLGDESSEAKGGGSSGGGAVQQKFRIPSSEVYNELMVCSLEGL HVAFMRLLFPDREPPAAAPTAASAAAGVPGGGGGGGGNKADSAASRGAAK KRRRGEGTADGDGEEEDGAATAAAAAAAAAGGEGGGGGGGPDKKRTRKDR GKRGKAAAAADDGGGGGPGGKVTALQVITGAAAGANAAAAAQAGGGGPVA RGGSAVVLTKEDFRAAALLPAWKPMQPALYSFFKSLLHVLEELKDRALLA FLLSRLEHYIPLLVPFPGLARGFLKALLGLWGGAGAEAKSSGGGTEEESE EAERVRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQAGK ASLRLMEGCVVELYGMEVGSAYQNAFLYIRQLSLLLRRAMQHKTRDAVQS VRRWQVVTCLRVWTGVLAAAPGEDELRTLIFPLAQARGFRD* back to topmRNA from alignment at S-firma_F_contig1075:13775..25199+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-firma_F_contig1075.1013.1 ID=mRNA_S-firma_F_contig1075.1013.1|Name=mRNA_S-firma_F_contig1075.1013.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=11425bp|location=Sequence derived from alignment at S-firma_F_contig1075:13775..25199+ (Sphaerotrichia firma ET2_F female) GTGAGCCAGGCTAAGACGATAGAGAGCGGACAAGAGGCACACAAGTAGGC
ACAGAAGGGTGAGAGGATGCCCGCAGCAAAGGGTCGGAATCGGAAGGCGC
GAAGGGCGACGGCGGCGGCGGCGGCACCCTCATCCACCGGCTCGCCAGAG
GATTGCTCTCCCTCAAAATTGGTGGGCGTTGCGGCTCCTGCGGGCCAGGA
GAAGCGGCGTCGGCAGAAGCAACGGCAGGAGCAGCTGGAAGAGAGGGACG
CGGCCGCTACTACTGCTTCGACAGCGAGCACGGGATCGTCTTCGAAGGGG
GAGGGCGTTGGGAGGAAGAGCAAAAATGACAGCGGCGGAGGAGTGGGCGG
TAAGAGACCATGGGCCTGTTGTGTCCTGCCGCTGCTGTGAACCACTGCTG
CTGACCGCGTGACACTAGAAGTCGATCGGATATCATAGCACACCACCCGC
ACCCGCCCTTACAGCTAGCGGTGGACATATCGTACAGGCCGACCTTGTAT
TCTTTCTCGAGCGTGCTCGCAGCACAACGCCCTTGGAACAGCTGCTCTAG
CTACATGTAGACTACGAGATGCCATGAAACAAGCGTGTACACTACCTGTC
GTAGGAGGGGGTCCAACCGCCCCCTCCTGTGTGACCCCGGGTGGGTCGTC
TAGCTAGTCGTAGTGGAGGGTGGGGGCCAGTGGGGCAGACGAAAGAGACA
CTAATGGGAGGAGAAAACAAAAAACAAAAACAAAAAACAAAAAAAACTAC
CAGTCTCCTCCTGTAGGGATCACCACAGCAATGACACCCTTGTGTGTTCA
AGCATGTGCAGCAGTCTAGGCACCGACGACGGCTCTCGTGTGCTTGTTGG
CTTTGTGGCCATGCACGCCACGGCGGTGCTGTCGTTTGCGACGGCGTGTG
GAACCGTGGGCTCAACCCTGACGTCAAACGAACCGTCGGCAACTTCGGCA
GGCACAGCAGGCCCATCCCGAAAAAAGGGTGTCTTGCCTCCGCCCCGTCT
GTCTCTTTCTTTCTCTCTCAAAAAAAAAAACGTCTCAGTTTGCCAACCAC
CTACTCGCTACGTTACAACCCAAGGTACATCCAGGGCAGCGTCTTCAAAG
TCAATCACCTTTCCATGCAATTAGTGCTGTCCTTAAGCGGGCGCTGCTTC
AGCAAAGCATCCAGCCGAATCCACCCTCTCTCTCCCCCCGACCCTCGCTC
ACGCGACCACACGCAGCCAAAAAGAAGTCCGAGAACGCCGGTGCTACTTT
CGACGTCGTCGTCGGCGGCGGTGGCGGCGGCGGCGGCAACATCGCCGACT
TGGACGCTGACGATTTCTTGAGCGGCGGTTTCATGTCCATGGCCGGCCTT
TCCGACGAAGACGAAGACGAAGACGAAGGCGGGGATGGAGACAAACAGGA
AGCTTCTGGAGGGGGCTCTGAGGGCGATGGCGACAACGACGACAGCGGCG
AAGGTGAGACATCATTGTCCGTTTTTTTTGCTCGGCTGTGGTTTGAACTT
GAGCTCTCTATGTCGAAGCTGCGACACTCCGTCAACTCTGCTGCCTCTCC
CTCCGGTTATTTTTAATCAATTTTCTACATACGTCAGCCGTATGCGTCCG
TCCAGTGAATTAGTCGTTCCAAGGGGGAGCGGACTGTTGTATACACACGA
ACCCCCCCCGTCCCAGCCAACAGCACAAAATCCGCAATCCGTTAGGTTTG
TTTGGTTGTTTTGTTTCGTAGTTTGTGAGGGGGTATGTTTTATTTTTAGC
TCAGGATGCTCCGGCTTCCTTCGCGTCGAGGAACGGGCACACCCTTTCTT
CTTCTCTTCTCCGTGCGCCTGCATGCCTGGAGCCACGGGCGCGGCGAGGC
GAGTTCGACTAATTAAAGTCGCACACGACATAACATGCGTTCCTCGACTT
TACTACAAAAAAACGCGCTCCATATCGTTTACATACATACATTCATGCTT
GCGAGATGCACTGCTGTGAGCCCTCGAGAGCTCTTTTTTTTTTGCGATTT
CTCCGCCCCTAGACCTCGAACACATACATTCATACATAAATGGCCACAGC
GTTGTCGCTCGTAACCCTGCCACCCGGCCACATCGTTTACTCTTCCCCAT
GCCGCAGGAGGAGGTGGGGTGGTCGGGGAGGACGACGAGGGCAGCGCCGA
CAGCGACGACGAGGAGGCGAACGCCAACGCCATGGACCTCAAGGGGCTGG
CGGAGACCGACCCCGAGTTCTTCAGCTTCTTGCAGGTGTGTGCTGTGTGC
TGTGTGCGTGTGCGTGTGTGTTGTGCCGTGAGTCTCTTTTGGCCTCTTCT
CGCTAGTTTTTTTAATATGTTTCTACATTCGTCAGCCGTATGCGTCCGTC
CTGTGAATACGTCGTTCCAGGGGGACTGTTGTTTTTTCTCCCTTTCTCTC
TCTCTCTCTCTCTCTCTCGGTCTGGACTTGCGTCGTAGTCGTAGATGTGT
CAGCACCACGAGACGAGGGGAGAGTTGTTCCCGCAACGGTTGTCCGGAAA
AGCACAACATCTGCGCAGTATGTCCATGACAGCAGAAGGTGGAGGTCGTA
GAGAGTGCTGCCGCCGAGGGCCGCAGGAAGCGTGCTGCTTGTAGATGTTT
TCTGGCGGCTGGTATCGTTCTTCCTGTAGTATCTGTCATCAGACCTACGC
ACCATCGTTTTCTTCCCGAACCTAAGCCTTGAAAGGCGTTTTCGGCAAGG
TTGACGGAGACTGTCTGTCGGTCTGTCGGCAGGATCCCGCCGCCTTCGCT
GTGGTCGTGGTTGTGGATCTCCAGTTATCTCGCCACAAATCGGACGCCAT
CCATCCCCGCCACAATAGCTTAGTGTTGCGCGTTTTGTTCTCCTCGTGGT
CAGCCGAGCGATGCCTCGCTGAAGCCGTTTTTTGCCTTGAGACCGAACAC
ATCCCCGCTCTTTGGTTTTCGGGGGTTTGACTCCGTAGTTACTCCTGCGT
CACACGCCGTTCCCTGTCCCCCCTGGCGCCCCGCTGTTTGCTACTGGATC
GCGTAGAAAGAGGAGCCGACGCTGCTGGAGTTCGACCCCATGGACAGCGA
CGACTCTGAGGACGAGGACGGGGAGGGTGGCAGTGGCGCCGTGAAGGAGG
CAGAGGCAGAGGGGGGGGTGGGGTCGGCGAAGAGCGCTGCGGCGCTCCTG
CGGGAGGCTTCCAAGTGGGTATTGCTGTGGCGGTGCCGGTTGCGTGCTTG
TTTTTCGTTGTTTTTGTTGTCTTTTTTTTAGAAGTTTTCTACCAAACGGC
AGCAATGTATTGCTCCACGCGAGGACTGCTGTATGGTCTGCCTTTTCTCG
GTGTCACTTGGCCCGACGGAATCGGGTTCGACTTACAAATCTATGCATGT
CTTTCGTGCGCCATGTTTCTTCTCCCCTTTGGTTTGCTGGTTGTCTTCGT
ACCTACTGTAGGTTGTAGTTGGCTAAAGAGCCTTCCCTTCCGCTCTTTTC
GTCTTGCCTACGTTGCTGTAAGACAAGCGACACAGAACAACGGTAGACTT
TCGCGTCGTTTCCGCTTTGTGGTGCGGCGGTCGACGAACCGCAGACTACT
CATCATGACGTAATGGACGGTTGTAATTTATGTCTTTTTCGTCGCCTCCA
CGCTTTGTTTTGCACGCCGCCGGCGGCAACAGGGGCGGCGGCGTGCCCCT
CACGATGGCGCTCCTCGAAGCCATGCGCCAGGAGGCGTTCGACCGCAAGA
GCATCCAGGGCGTCAGGAGAATGATCAAAGCCTTCCGCTGCGGCTGCCAC
CTGGGTGAGTTATGGCCTAGTGTAGCCTGCTGCCGTGATTCCGTGTTTTG
TTCTGCGTGTGTGTGTGTATGTTTGGTCTCCTGCTTCACGCGGGAGGAAA
AAGCGCCCTAAAACCATTGTTTTGTCGTTAGAGATCTTCTATCGTAGTAG
AGTCAACAATTATAAACGAACGAATACATATCGATGGTTACCACAGCTTG
CGTGTGCGTAAGAAGCTACATAAGTCTTCGGCGACGGACGGTGTTGCGGC
TAGGGAAAGCGTTTCCCTGGGCGGCGCGATGAGAGTGGTATCAAGGAAGG
CGACCCGACCATCCGAAATTTCGGTTGTTGGGTTGTGCCTCGAGCCGTAG
CGTGTGCAGCTTGCTTCGAACGATCGAGTCGTGTGGCGTCAACGCTGGCG
GTGTGACGCCGCGGCTCGAGGCCGTGACCGTTTTGTTTTCATTTCGAGTA
CCGCACTGACGTGCTTGCTGCTTGCCCGCCTCTCTGTGGTGTCATCGTCG
TCGTCGTCGTCGTCGTTGCAGGCGACGAGTCGTCTGAAGCCAAGGGCGGT
GGCAGCAGCGGCGGCGGCGCGGTCCAGCAGAAGTTCCGCATTCCGAGCAG
CGAGGTGTACAACGAGCTCATGGTAAGCCGCTCGTCGCCCCCCCCTCCCC
CCCGCCACTCCACGGATGTCACCCCGTCCCAGCTCTTGGAACGGCGGAAT
CCTGGGACATTGGGTCGGCCCCGCGTTGTACGGGTACCCCGCCCCCAAAT
CGTTTTTGCCTCCACCGCCATTTGTTGGACCCCCCCCTCTCCCCTCCCCC
CCCCCTCCGTGTGCCGAACGAGTACATCCCCTTTCTGAATCGCACCAACC
TTTGTGTTCGCTTGCGCCCCCTGCCTCCCCCCCCCCCCCGCCTCCTTTAC
ATACACCACCACAACAATGCTCCCGGTTTTCCCAGGTGTGCTCCCTCGAA
GGGCTCCACGTCGCGTTCATGCGCCTTCTCTTCCCGGACAGAGAGCCCCC
CGCCGCCGCCCCTACCGCGGCATCGGCAGCGGCAGGTGTTCCAGGCGGCG
GCGGCGGCGGCGGCGGCAACAAGGCGGACAGCGCCGCCAGCCGCGGGGCC
GCCAAGAAGCGGAGGCGTGGCGAGGGCACCGCTGACGGTGACGGGGAAGA
AGAGGACGGGGCGGCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGG
GCGAAGGAGGAGGGGGCGGCGGCGGGCCGGACAAGAAGAGAACACGCAAG
GACAGGGGCAAGAGGGGCAAAGCCGCAGCGGCGGCTGATGACGGCGGCGG
CGGTGGCCCCGGTGGGAAAGTAACTGCCCTGCAGGTTATCACTGGGGCTG
CTGCGGGGGCCAACGCGGCGGCGGCGGCTCAGGCGGGGGGCGGGGGTCCC
GTGGCGCGAGGGGGGTCCGCGGTGGTGCTGACCAAGGAGGATTTCAGGGC
GGCGGCGCTGCTTCCCGCCTGGAAGCCTATGCAGCCGGCGCTCTACAGCT
TCTTCAAGTGAGCCACGACTTGGCAGATGTTGTACAGGAGAGAGATGACG
GAGGAGAGGGGGGGGCTCTCCGTTGTGTGTTTCGTGGATGTTGCTGGTGG
TATTTTTGCCCTCTGTCTTGCCGGAGGTTGGTGTAGTGTCTACTCCGACG
CAGGCATGAAAAAATAACGCCAGAAGACCGACAGGTGCGCCTCTCAAACA
CCATCAAAACCGCCACCACACCCAACACAACCTCAACTACCACATCATCA
TCATCATCATCATCAGCAGCAGCAGCAACAACGTAGCACCAACAGCCTCC
GAATCCCCCCCCCCGCCCCCCCCCCAACCCCAAAGGTCGCTGCTCCACGT
GCTGGAAGAGCTGAAAGACCGGGCTCTGCTAGCCTTTCTGCTGTCGAGGC
TCGAGCACTACATCCCTCTGCTCGTCCCTTTCCCGGGGTTGGCGAGGGGT
TTCCTAAAGGCGCTGCTGGGGCTCTGGGGGGGCGCCGGCGCGGAGGCGAA
GAGCTCCGGAGGGGGCACCGAGGAGGAGAGCGAAGAAGCCGAGAGGGTGA
GAGGGCTGTCGAGCTGAGTGTTAGCCGGGGGGTTTTTTGGGGTGGGAAAT
TGTGCGCAAGGACGAGAGCGCGTAGAAGCCGAGAGGGTGAGAGGGCTGTC
GAGCTGAGTGTTAGCCGGGGGTTTTGGGGGTGGGAAATTGTGCGCAAGGA
CAAGAGCGCGTAGAAGCCGAGAGGGCGAGAGAGGGTTTCGGTGGAGTTGA
GGTTTAGCGGAAGAGGTGTGTGTGTGTGTGTGTGTTTTTGTGTGGCGCGA
GATTGTGCTGAGGAGTATTAATGTCTTGTCAGCTTGCCGGCAGGGAGGCA
AGGCTTCGGAAGTACCGCAGAGCAGACAAGGTTTGGTTAGAGAGATTGAA
GCGTGACTACCGCTTGTGTCGTCCGTCGTTCGTGGCCCGAATGGCTGTTA
TCGTGTGGGTGAAACAAGACAAGACCAACCAAGCGAGGGTAACGGCGTTG
TTAGAGCGTTAGCGTTGTTGGTTTTGCTCGCAGAGGTAGCTGTACCGACA
ACGACGACGAAAGCAAAGGAACAGAGAGAAGGAGCTTGGATTGAGCCCCG
GCTGAGTCGAGTCCAATTTAGCGGACACGATGGTGCGAAGAGTTTGATTG
CTTCGGACAACGTGGTTCGGCTGCTGACCCCACCTCCACGCCTCACCACG
CGTACTTTCTTGGTGCTCCTCCTCCTGGCCATCGTCACCAACCCTCGTTC
CGGCGGTGACGAAAACCCGACGGGTAGGTCCGTCCCTTACTCGGCGTACA
GGTGCACGGGATCCGCGAGGGCTCACCGTCTGTCCGGTACATGTAGACTG
CTGTGTGCTCGTTTTTTTCGCACGCACCTCCCCGCGTTTTTTTGTGCTTC
GTCAACGTATAATGTGAAGACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACACCAACAACAACAACA
ACGCTAGCCTTGTCCGGCAACACCCAGCGTGCCCTGTCACGGCTTTGTAG
AGGCACAAAGGCAGTAGGAAGGAAGCACCGGGCGACGAGCTACCATACAC
GCATGAAAGGAGCATCCACACCGAAGACCATTCACGGAGCTCCCCCCCCC
CCCAAACGCCTCTTCGTCGTTCGTGGACCAGGTTCGGCTGCTGGCTTACC
TTCGAGTTCGGCAGATGGCGGCGGCGTTGCCGTTCCCGTTCGTGGAGGGC
TGCATGAAGAGGCTCTACCTCGCCTTCGCCAAGAGGGCGAGGGCGCCGCC
GGCCTCACAGGCCGGCAAGGCCTCGCTCAGGCTCATGGAAGGGTGAGTGA
TGGGTGACGGTTGCTGCTGCTGCTGCTGCTTGTTGGCCGTGGTTCTGCTG
TAGATGGTTGTCTGGTGGTGGCTGCTGTCGTCGTTGTTGTTGTTGTTGTT
GGTGGTGGTGGTGGTGGTGGTGTTGTCCGGTCCCCTGATCGTGTTGTGGT
GGGTGTCTTTTTTTCGTTTTCTTCACACCGTAACGGTCAGCATACGGTTT
GTTTGCCGGAGTCAGTCGTGGGTGTTGGCGGCCGCTAAATGGTTGGTTTC
TGACCTCCTTGGTGGCGAGGACGTGGTCTCACATGAGCTTTTGTCCAGCC
GGCGAGGCCTGAAGCAGCAGGGTTTCAGAGCCGTCAAACCATTAGCCCCC
CCCCCGCTAGCCTCCTACCTTCGTTTTCCTTGCCCAGCCCATTGGTTCCC
AGCATTTTTCAGTACTACCGCGCGTTTCACTGCCACAGCGACACTTTGTT
CCTCTTCACAGCGCACTTTGCTCGTGACGTTTTCTTTTTTTTTGTGTTTG
CTCCCATTCGCTCCTCAGGTGTGTCGTTGAGCTGTACGGCATGGAGGTGG
GCTCGGCGTACCAGAACGCCTTCCTGTACATCCGGCAGCTGTCGCTCCTG
CTCCGCCGCGCCATGCAGCACAAGACCAGGGACGCTGTCCAGTCTGTTCG
ACGCTGGCAGGTGACGCCTCCACTTTGGTGTTGCTCGGTCTTTTTGCGAT
CGATAGATAGATGTAGATGCGGACGTTTGACAGTTTTGGCCGTGGTTGGT
TGTCGATAGGCTTCACGTTTGTGCTGATTTTGTTTGTTTGGTCGATGCAC
GCCCGGATGCCTGCTGTTTTGCCTCGAAGGGGCGCAGGTCAAGGTGGTTG
CGGACGCCTACGCCCACGCCTACGTGCGACCGTTTTCGTCCGAGTGTTTG
TTTTCGGATTGAGCAACCACGGAAGGCGTTTTTGACGAAGAGCCGAGAAA
AAACGAACGCGCCTCAACAAGAAAAACACGAAGAATGGAAAAAGACGGCC
GCTTGCTGGCTTCTATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGATAGAGGGAGAAAGGGAAATGGAGAGAAGGGGAGAAGAAA
ACAGCGCCGACGCGTAACCGTCAGTTGTTCTCGACCTTTTTCCCGCTCGA
TGTCGTGTGTCAGGTGGTAACTTGTCTCCGCGTATGGACAGGAGTGCTGG
CCGCAGCGCCGGGGGAGGACGAGCTCCGGACGCTCATTTTCCCGCTGGCA
CAGGCAAGGGGATTCCGCGACTAAACCGTTGTATGTTTTGTGTGTGCTGT
GTCTCAGTCGGTCGTTGCCCCCCGCGGCTATCTAGAATTAATGTGCTGGA
TGCGGAGCGCGCCACGCTCGAGCCGAAATTCAGACGAGTTCCTACGCTTG
AGCCCGGCGACTATGTTGTTCTTGTTATTTGTCTTTCGTTTTCGGACCAC
GCCATCAGGATTTACCTTCGGCTGCACTACGGTCGTCTGTCTCAAGTTCT
CCGTATGTGCTTGCTCCCAAAAGATCTGCACGCTTCAATCGGCGGTGCCG
CCGGGTGACACTCAAGTGTTTGTCCGCACAGAACGACTTTTCTCACATGG
CTGCCGTATGGCGTGCATGCCACGTCGCATCGCGGACCCCCCGCCTCCTG
CGGGGGGAGGCCCCGCCTCCCGCTTCCTGAATTGTTTTTCTGCCCTCTCT
TATGAATGGCTTCTTGCAAACGACCAGGTGATCGAGGGCATCGTGCGCCT
CTCGGCTACCCTGCGCCACTCCCCCCTGGTGTTCCAGCTCGTGCGCATGA
GGCAGCGGCTGGCCGCCGCCGCCGAGCTGTACGTGCCGTGCTCCATGCCG
CTGCTGGAGGTGCTCCGCAGCCCGGCTCTCTTCAAGAAGGTAATAGTTTG
TCCTTTCGGATTCGGGCTTCAAGAGGGGTAGTTTGGCCTTTCGGAGTTCG
ATTTAGAGTCAGACGGCGGTGGAGGTGGGTATACTATCCAAGTTTTGTAC
ATGCCAACGGTTGCAGTAGAGCTTGTGACCGACGACGGCGCCCCAGAACC
GTCCGCAGCACCCCAAACTGTTGGCGGAACCGCTTTTTACTTTTGAGATA
TGTATTCGAACCGACACCGTTTCATGGGACGGAGAAGCACCTGTTGATTT
TTGTTGGGGTTGCTGAACGTCAGGCGTCTGCTGCGTGCAAGCTACATGGC
GTGCAAGCTACATGTAGTACATGCAAATGGCGGTTTTGCGAAGATGAGAC
GCGGTAAGAGATGCCATGTCATGCCCCGACCTGCCCGGGCTTGCGCGCTT
GGCTCATTGAGGTTGTCCGATCAAGGTCGATAGCGTCGAAATCGCAGGGA
CGGGCTGAAAAGCCTGAGACGTACCACCTCACAGCTCTTGGTCCGATTCT
GCTGCGGCGGCGAGTGGCATTTTTGCACGTGCCTGCCTGCCTGCCTCCTA
CGTGCCTCCTCTCTTCTTTCCTCGTCGCGAAAAGCTCAACTCAAAGATGT
TTCCCTCCCTCCCGAGCTCATGACGGCCGGTGCCCTGCACATCCCGGCTA
GTCCTAAGTCTGTCTCTGTCTCTGCCTCTCTCGATTTATCTCTATCTTCC
CCCCTCTCGGCAACCATTTCCCGTAGCGAGCGCGTCCGCCCAGTGAGTGC
ACTTCTTCGCGTACCGGGCGCTGGGTGTAGTCACGTCCTAGGGCCGTTTT
ACGCGCAGAGTTCCCCCCCCCCCGTACTTTCCAAAACCTTGGAATCCACA
ACCAAGGAAAAACGGTGATTTGTACCCCCCCGCCAGAGAAAGATTCAAAT
TTGGCGCGAAAAGGTGCCGTGTACAAAACGGCCCTTAATTAACCCCTTTG
CTCTTATGCTGCGCTCGCATGGCAGGCAACGGCGTCGACGGGGGCCCCGC
CGAGTGTCCCCGCCATCCTCCGGCTGGGCAAGACGCAGGTCGACGAAGGG
AGGGCGCAGGGGGCCGTGGTGGAGGAGGCGCTCAGGCTTCTGGGCCAGGT
TAGTCGGGATGCTGCGTCCCTGTGGTCGATGTCGTCGCTGTTTGGTGTTC
ACGTCTTGCCTTTGGCGAGGCCCATGGTCCTATGTCTGCGACGTGAGCAG
TTCAATGAGTGCACCCAATATCCACGATGTTTGACTATTGTTGAATCCTT
GTGCAGGAGATGGATTTATACCGGTATTCGGCGGCGTTTCCCGAGCTGGT
GATTCCCGTCCTCGGACACATCAAGAAGTTCGCCAAGCTCACAAAGGTAA
ATGCTCAGAAAAGCAGCGGGCCCTATTTCCCGCACGTGAGCAAGCCCGAT
CATGATGTGTCAGCCGCCGCTGTACTTGTAGGTAGTACATGTGTAGTCTA
CAGTGCGTACGAATCAGGTTCTGCATTTTTTCCTGCGTACGAGTCAATTA
CTGGAGCCTACGATTTTCGCTGTCTTTGCTGCTACTGCTGCTGCTGTTGT
TTTCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTCGTCGTC
ATGGAGCATGTACATGACATGCAGACGAGTGCTTGGTTCTGTTTTGCCAA
GGAGTCTCGAAAACATTCAAACCAGCAACACCCAGCCCAGCCTACGAGAG
CTACTCGGTGTAGGTACCTCAACCCGGGATGTTGTTGTCATTATTTCATC
TGCACGCTTGATTCCTTCCGTGTGCGACAGGTGTCGAAGTGGCGGATGAT
GTCGAGAGGTTTGGTGGAGACCTTGGAGGCCAGGGGCACGTGGGCGGCGG
AGAGGCGGCTGGAGCTCCGCATCTGCCCCTCCGACGTTGAGGGGCTGGAA
GTCCTGAGGCCGAAGGTGAGACTTTAGAACAATGCTTACCATGCTTACCA
TGCCTTCATATGCGTACTAGTCCCTCTCTAGACCCTGTATGCACACCATA
TTAGGAATACCCCCTCTTTCCGCGCCCGCAAAGTGGGATGTAAAGGTCGA
GAGCGCGTGATTTTTATGCACTTTGCGGTAACAACATGGCGGGGACGGCC
CTATCCCCCCCCTCGAGACTCCACGCCCCCCCCGGGCTGCCATGCGCATA
GTTGCAGCCGGTCTTCCTCCGGCTGGCGAAATGAAAAGTTTTCGCGGCGA
TGTTTAACCGATAAGAGCAAGCGCCAACTGCGCACCCCCATCCCGGCTTG
GTCGCAATTTCACCGCGAATGCCTTCAGGGAGCGCCCACCATGCGCGAGC
GGCTGGGAGCCTCGGAGGCGGAAGTCGAGAGGGCCGTCGACGACGAAGCA
CCGGCCACGAAGGTTAACGCCGGCGCCTTCGCCGCGGGCAAGGGGAAGAA
GGCAGAGAACAAGAACAATAACAAG back to topCoding sequence (CDS) from alignment at S-firma_F_contig1075:13775..25199+ >mRNA_S-firma_F_contig1075.1013.1 ID=mRNA_S-firma_F_contig1075.1013.1|Name=mRNA_S-firma_F_contig1075.1013.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4452bp|location=Sequence derived from alignment at S-firma_F_contig1075:13775..25199+ (Sphaerotrichia firma ET2_F female) ATGCCCGCAGCAAAGGGTCGGAATCGGAAGGCGCGAAGGGCGACGGCGGC GGCGGCGGCACCCTCATCCACCGGCTCGCCAGAGGATTGCTCTCCCTCAA AATTGGTGGGCGTTGCGGCTCCTGCGGGCCAGGAGAAGCGGCGTCGGCAG AAGCAACGGCAGGAGCAGCTGGAAGAGAGGGACGCGGCCGCTACTACTGC TTCGACAGCGAGCACGGGATCGTCTTCGAAGGGGGAGGGCGTTGGGAGGA AGAGCAAAAATGACAGCGGCGGAGGAGTGGGCGATGCCCGCAGCAAAGGG TCGGAATCGGAAGGCGCGAAGGGCGACGGCGGCGGCGGCGGCACCCTCAT CCACCGGCTCGCCAGAGGATTGCTCTCCCTCAAAATTGGTGGGCGTTGCG GCTCCTGCGGGCCAGGAGAAGCGGCGTCGGCAGAAGCAACGGCAGGAGCA GCTGGAAGAGAGGGACGCGGCCGCTACTACTGCTTCGACAGCGAGCACGG GATCGTCTTCGAAGGGGGAGGGCGTTGGGAGGAAGAGCAAAAATGACAGC GGCGGAGGAGTGGGCGCCAAAAAGAAGTCCGAGAACGCCGGTGCTACTTT CGACGTCGTCGTCGGCGGCGGTGGCGGCGGCGGCGGCAACATCGCCGACT TGGACGCTGACGATTTCTTGAGCGGCGGTTTCATGTCCATGGCCGGCCTT TCCGACGAAGACGAAGACGAAGACGAAGGCGGGGATGGAGACAAACAGGA AGCTTCTGGAGGGGGCTCTGAGGGCGATGGCGACAACGACGACAGCGGCG AAGCCAAAAAGAAGTCCGAGAACGCCGGTGCTACTTTCGACGTCGTCGTC GGCGGCGGTGGCGGCGGCGGCGGCAACATCGCCGACTTGGACGCTGACGA TTTCTTGAGCGGCGGTTTCATGTCCATGGCCGGCCTTTCCGACGAAGACG AAGACGAAGACGAAGGCGGGGATGGAGACAAACAGGAAGCTTCTGGAGGG GGCTCTGAGGGCGATGGCGACAACGACGACAGCGGCGAAGGAGGAGGTGG GGTGGTCGGGGAGGACGACGAGGGCAGCGCCGACAGCGACGACGAGGAGG CGAACGCCAACGCCATGGACCTCAAGGGGCTGGCGGAGACCGACCCCGAG TTCTTCAGCTTCTTGCAGGAGGAGGTGGGGTGGTCGGGGAGGACGACGAG GGCAGCGCCGACAGCGACGACGAGGAGGCGAACGCCAACGCCATGGACCT CAAGGGGCTGGCGGAGACCGACCCCGAGTTCTTCAGCTTCTTGCAGAAAG AGGAGCCGACGCTGCTGGAGTTCGACCCCATGGACAGCGACGACTCTGAG GACGAGGACGGGGAGGGTGGCAGTGGCGCCGTGAAGGAGGCAGAGGCAGA GGGGGGGGTGGGGTCGGCGAAGAGCGCTGCGGCGCTCCTGCGGGAGGCTT CCAAAAAGAGGAGCCGACGCTGCTGGAGTTCGACCCCATGGACAGCGACG ACTCTGAGGACGAGGACGGGGAGGGTGGCAGTGGCGCCGTGAAGGAGGCA GAGGCAGAGGGGGGGGTGGGGTCGGCGAAGAGCGCTGCGGCGCTCCTGCG GGAGGCTTCCAAGGGCGGCGGCGTGCCCCTCACGATGGCGCTCCTCGAAG CCATGCGCCAGGAGGCGTTCGACCGCAAGAGCATCCAGGGCGTCAGGAGA ATGATCAAAGCCTTCCGCTGCGGCTGCCACCTGGGGGCGGCGGCGTGCCC CTCACGATGGCGCTCCTCGAAGCCATGCGCCAGGAGGCGTTCGACCGCAA GAGCATCCAGGGCGTCAGGAGAATGATCAAAGCCTTCCGCTGCGGCTGCC ACCTGGGCGACGAGTCGTCTGAAGCCAAGGGCGGTGGCAGCAGCGGCGGC GGCGCGGTCCAGCAGAAGTTCCGCATTCCGAGCAGCGAGGTGTACAACGA GCTCATGGCGACGAGTCGTCTGAAGCCAAGGGCGGTGGCAGCAGCGGCGG CGGCGCGGTCCAGCAGAAGTTCCGCATTCCGAGCAGCGAGGTGTACAACG AGCTCATGGTGTGCTCCCTCGAAGGGCTCCACGTCGCGTTCATGCGCCTT CTCTTCCCGGACAGAGAGCCCCCCGCCGCCGCCCCTACCGCGGCATCGGC AGCGGCAGGTGTTCCAGGCGGCGGCGGCGGCGGCGGCGGCAACAAGGCGG ACAGCGCCGCCAGCCGCGGGGCCGCCAAGAAGCGGAGGCGTGGCGAGGGC ACCGCTGACGGTGACGGGGAAGAAGAGGACGGGGCGGCCACAGCAGCAGC AGCAGCAGCAGCAGCAGCAGGGGGCGAAGGAGGAGGGGGCGGCGGCGGGC CGGACAAGAAGAGAACACGCAAGGACAGGGGCAAGAGGGGCAAAGCCGCA GCGGCGGCTGATGACGGCGGCGGCGGTGGCCCCGGTGGGAAAGTAACTGC CCTGCAGGTTATCACTGGGGCTGCTGCGGGGGCCAACGCGGCGGCGGCGG CTCAGGCGGGGGGCGGGGGTCCCGTGGCGCGAGGGGGGTCCGCGGTGGTG CTGACCAAGGAGGATTTCAGGGCGGCGGCGCTGCTTCCCGCCTGGAAGCC TATGCAGCCGGCGCTCTACAGCTTCTTCAAGTGTGCTCCCTCGAAGGGCT CCACGTCGCGTTCATGCGCCTTCTCTTCCCGGACAGAGAGCCCCCCGCCG CCGCCCCTACCGCGGCATCGGCAGCGGCAGGTGTTCCAGGCGGCGGCGGC GGCGGCGGCGGCAACAAGGCGGACAGCGCCGCCAGCCGCGGGGCCGCCAA GAAGCGGAGGCGTGGCGAGGGCACCGCTGACGGTGACGGGGAAGAAGAGG ACGGGGCGGCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGGGCGAA GGAGGAGGGGGCGGCGGCGGGCCGGACAAGAAGAGAACACGCAAGGACAG GGGCAAGAGGGGCAAAGCCGCAGCGGCGGCTGATGACGGCGGCGGCGGTG GCCCCGGTGGGAAAGTAACTGCCCTGCAGGTTATCACTGGGGCTGCTGCG GGGGCCAACGCGGCGGCGGCGGCTCAGGCGGGGGGCGGGGGTCCCGTGGC GCGAGGGGGGTCCGCGGTGGTGCTGACCAAGGAGGATTTCAGGGCGGCGG CGCTGCTTCCCGCCTGGAAGCCTATGCAGCCGGCGCTCTACAGCTTCTTC AAGTCGCTGCTCCACGTGCTGGAAGAGCTGAAAGACCGGGCTCTGCTAGC CTTTCTGCTGTCGAGGCTCGAGCACTACATCCCTCTGCTCGTCCCTTTCC CGGGGTTGGCGAGGGGTTTCCTAAAGGCGCTGCTGGGGCTCTGGGGGGGC GCCGGCGCGGAGGCGAAGAGCTCCGGAGGGGGCACCGAGGAGGAGAGCGA AGAAGCCGAGAGGGTCGCTGCTCCACGTGCTGGAAGAGCTGAAAGACCGG GCTCTGCTAGCCTTTCTGCTGTCGAGGCTCGAGCACTACATCCCTCTGCT CGTCCCTTTCCCGGGGTTGGCGAGGGGTTTCCTAAAGGCGCTGCTGGGGC TCTGGGGGGGCGCCGGCGCGGAGGCGAAGAGCTCCGGAGGGGGCACCGAG GAGGAGAGCGAAGAAGCCGAGAGGGTTCGGCTGCTGGCTTACCTTCGAGT TCGGCAGATGGCGGCGGCGTTGCCGTTCCCGTTCGTGGAGGGCTGCATGA AGAGGCTCTACCTCGCCTTCGCCAAGAGGGCGAGGGCGCCGCCGGCCTCA CAGGCCGGCAAGGCCTCGCTCAGGCTCATGGAAGGGTTCGGCTGCTGGCT TACCTTCGAGTTCGGCAGATGGCGGCGGCGTTGCCGTTCCCGTTCGTGGA GGGCTGCATGAAGAGGCTCTACCTCGCCTTCGCCAAGAGGGCGAGGGCGC CGCCGGCCTCACAGGCCGGCAAGGCCTCGCTCAGGCTCATGGAAGGGTGT GTCGTTGAGCTGTACGGCATGGAGGTGGGCTCGGCGTACCAGAACGCCTT CCTGTACATCCGGCAGCTGTCGCTCCTGCTCCGCCGCGCCATGCAGCACA AGACCAGGGACGCTGTCCAGTCTGTTCGACGCTGGCAGGTGTGTCGTTGA GCTGTACGGCATGGAGGTGGGCTCGGCGTACCAGAACGCCTTCCTGTACA TCCGGCAGCTGTCGCTCCTGCTCCGCCGCGCCATGCAGCACAAGACCAGG GACGCTGTCCAGTCTGTTCGACGCTGGCAGGTGGTAACTTGTCTCCGCGT ATGGACAGGAGTGCTGGCCGCAGCGCCGGGGGAGGACGAGCTCCGGACGC TCATTTTCCCGCTGGCACAGGCAAGGGGATTCCGCGACTAAGTGGTAACT TGTCTCCGCGTATGGACAGGAGTGCTGGCCGCAGCGCCGGGGGAGGACGA GCTCCGGACGCTCATTTTCCCGCTGGCACAGGCAAGGGGATTCCGCGACT AA back to top
|