mRNA_S-firma_F_contig1071.962.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: D7G484_ECTSI (Lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G484_ECTSI) HSP 1 Score: 418 bits (1074), Expect = 5.770e-141 Identity = 236/351 (67.24%), Postives = 258/351 (73.50%), Query Frame = 2
Query: 275 LQEALARCEVILRAGE----AAGIEQASGKTSAVAPLASENVDSSKSSGPLDGLRRFSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGS--KLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGD--GDGGP---LKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLA-QGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVSVL 1291
L++ LA+CE AG G +S S A A S S PL+GLRRFSRDG DGVFMGAAGVPVRYRLFPKYS E KL+PGV+LLTGLMESM KYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPD AD TVAHITDFDHYVQDL +FSKV+LPA V RD SG GG+ S P+ NG+ G P L LSV+AHSMGGL+AV AAL EP LF+G+VLAAPMLAPNTGKL NG+VGA+ WV TKL QGHRSPIRRPARATMEWS+VTHD+ RLRLWETLRG V CVLQRGPSFAWLS++V ASKR R RL LSV VL
Sbjct: 2 LRQVLAQCEAAFLAGTEDATTPGSVPSSSSASETAAAAPGPKQLSAKSAPLEGLRRFSRDGTDGVFMGAAGVPVRYRLFPKYSKGEGDGCGKLQPGVILLTGLMESMTKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDGADPTVAHITDFDHYVQDLERFSKVILPATVR---PRDASGGTRTGGQGTAG-----SGDSPVVNGEPLGCDAPFPALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPNTGKLPNGVVGALTWVVTKLGRQGHRSPIRRPARATMEWSRVTHDKERLRLWETLRGTVGCVLQRGPSFAWLSKSVLASKRARGRLHQLSVPVL 344
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A6H5KMI3_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI3_9PHAE) HSP 1 Score: 230 bits (587), Expect = 1.960e-70 Identity = 131/198 (66.16%), Postives = 146/198 (73.74%), Query Frame = 2
Query: 710 TDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENG-----DGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLA-QGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVS 1285
+DFDHYVQDLV+FSKV+LPA V RD SG G S P+ NG DG L LSV+AHSMGGL+AV AAL EP LF+G+VLAAPMLAP TGKL NG+VGA+AWV TKL QGHRSPIRRPARA+MEWS+VTHD+ RLRLWETLRG V CVLQRGPSFAWLS++V ASKR R RL LSVS
Sbjct: 3 SDFDHYVQDLVRFSKVILPATVR---PRDASGGTG-----TXXXXXXXSGDPPVVNGELLGSDGTLPALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGIVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSVS 192
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A0G4ERV7_VITBC (Hydrolase_4 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERV7_VITBC) HSP 1 Score: 119 bits (298), Expect = 1.090e-25 Identity = 100/285 (35.09%), Postives = 130/285 (45.61%), Query Frame = 2
Query: 419 GLRRFSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMG---GLVAV---KAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGHRSPIR-RPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKR 1252
G+ F R G G F GA GV + YR FP Y + EG+ L PGVV+ TG E VKYGE I L GFSV+T+DH QGLSG + H+ F HY DL F V+ A P H + + + P L +AHSMG GLVA K + LF M L+APMLA T N +A +A + RSP+ P +++THD R WE +RG + + RGPSF W+ + ++A R
Sbjct: 157 GITFFVRHGRHGSFRGANGVRIVYRAFPHY--DSEGALL-PGVVVATGWSECHVKYGELIRDLYRAGFSVFTFDHRCQGLSGHEL--GEGRPWITHVERFHHYTDDLTTFVNEVVKA-TPTHR----------------SPAIARTRPAP-----------PLFYVAHSMGAFIGLVAQHNSKQSDPPSPLFCRMALSAPMLAMKTPAGPNRFAIWLARIAILAGRKIRSPLGDHPVENPELGARITHDDDRKSAWERMRGMLPRTMIRGPSFNWIKEGMKAGFR 408
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A1L4D1T5_9PROT (Hydrolase_4 domain-containing protein n=1 Tax=Silvanigrella aquatica TaxID=1915309 RepID=A0A1L4D1T5_9PROT) HSP 1 Score: 91.7 bits (226), Expect = 8.220e-17 Identity = 86/296 (29.05%), Postives = 128/296 (43.24%), Query Frame = 2
Query: 431 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPM----LAPNTGKLSNGIVGAVAWV-----ATKLAQGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVSVL 1291
+ G F+G A V + R F + + ++L TG ES +KY E I +L + GFSVY YDH GQG SGR + ++ F++YV DL F + V SGS + + LP+ IAHSMGG + A E+ + G++L+APM L P L + G ++ + A K A G I P R E + VTH + R +W E+ + GP+F WL +AV AS+ R+ +++ +L
Sbjct: 35 YKAKGVSEQFLGVADVAISCRTFLAQNATAK-------IILCTGYNESYLKYSELIMNLCESGFSVYCYDHRGQGFSGRFLNQEKR----GYVDKFENYVDDLCYFFEQV-------------SGS--------------QKNDLPI------------FFIAHSMGGAICSLAVNEKKINPNGVILSAPMHEIMLTPYH-ILEVPVYGILSLMCKLNYANKYAFGQTDCI--PFRP-FEGNDVTHSKARYSVWRKHIDEIEDMQLGGPTFQWLKEAVGASRTCRKHFAKMNIPIL 276
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A833JGU7_9PROT (Alpha/beta fold hydrolase n=1 Tax=Fluviispira multicolorata TaxID=2654512 RepID=A0A833JGU7_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 1.510e-16 Identity = 75/293 (25.60%), Postives = 130/293 (44.37%), Query Frame = 2
Query: 431 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPM--LAPNTGKLSNGIVGAVAWVATKLAQGHRSPIRR----PARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVSVL 1291
+ G+ F+G +P+ R+F E SK ++L TG ES +KY E I +L + GFSVY +DH GQG SGR + ++ F++YV+DL + + + V G LP ++AHSMGG +A A + + G++L++PM +A + + ++ ++ + KL + + P R E + VT+ + R +W E+ + GP+F W+ +A++AS+ R+ D +V +L
Sbjct: 35 YKSQGSTNQFLGVNDIPISCRIF-------ENSKATVKILLCTGYNESYLKYAELIMNLFEMGFSVYCFDHRGQGFSGRFIGQEKK----GYVDHFENYVEDLSFYFENI---------------------------VNGHQVELPT------------FILAHSMGGAIATLAVCGKKITPYGVILSSPMHAIALSPYLILEYLIYSLTNIFCKLGKNKEYVFGQTDCIPFRP-FEGNDVTNSKFRYEIWRKHISEIDDMQLGGPTFGWMREAIKASRSARKMGYDNNVPIL 276
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A7X1HAY5_9HYPH (Alpha/beta hydrolase n=1 Tax=Rhizobium sp. AQ_MP TaxID=2761536 RepID=A0A7X1HAY5_9HYPH) HSP 1 Score: 86.3 bits (212), Expect = 5.010e-15 Identity = 80/271 (29.52%), Postives = 119/271 (43.91%), Query Frame = 2
Query: 452 GVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQF-SKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRR 1261
G F G GV +RY +F +P+ G+ +VLL G E++ KY ETI LN+RGF V TYD GQG S RL DT H+ FDHY++DL F ++VLP + LP ++AHS GGL+A+KAA E MVLAAP + + S + +A +A+ G + + E + +T D R + + + + P+ W+ ++ +A + RR
Sbjct: 20 GFFQGHRGVRLRYAVFRSQAPKTLGT-----IVLLHGRNETIEKYFETIRELNERGFWVATYDFRGQGGSERL----LKDTRRGHVARFDHYIRDLEIFLEQIVLP-----------------------------DTRLPF------------FLVAHSTGGLIALKAAPRLANRIERMVLAAPFVGLGGQRTSPENIRRLAMLASFTGLGRVTLNKDEPLKPFEGNPLTSDALRFARNQRILTDHPELALGPPTARWIYESQKAIEAIRR 240
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A369KX79_9PROT (Alpha/beta hydrolase n=1 Tax=Spirobacillus cienkowskii TaxID=495820 RepID=A0A369KX79_9PROT) HSP 1 Score: 85.1 bits (209), Expect = 1.340e-14 Identity = 78/293 (26.62%), Postives = 126/293 (43.00%), Query Frame = 2
Query: 431 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTG--KLSNGIVGAVAWVATKLAQGHRSPIRR----PARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVSVL 1291
+S G + F GA + + R+F +P+ + +L TG ES +KY E I +L + GFSVY +DH GQG S R S + ++ F+HY+ DL QF V P+ LP+ +IAHSMGG +++ A L + + +VL+APML G +L V ++ + L + + P R E + VT+ + R W ++ + GP+F W+ QA+ SK+ R+ ++ +L
Sbjct: 35 YSSQGQEYKFQGANNISISARIFIHSTPKGK-------FLLTTGYNESHLKYAEFIMNLFEMGFSVYCFDHRGQGFSERF----SEQSKRGYVDKFEHYINDLSQFFDYVSRHDNPV---------------------------LPVH------------IIAHSMGGAISLLALLNQKITPRSLVLSAPMLEIVLGPTRLLELPVLYLSHLMCLLGRSKNYVFGQTDCIPFRP-FEGNDVTNSKGRYTAWRNHIHDLEEMQLGGPTFGWMQQAILFSKKIRKTKNEIKTPIL 276
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A1T4RA10_9HYPH (Lysophospholipase, alpha-beta hydrolase superfamily n=1 Tax=Consotaella salsifontis TaxID=1365950 RepID=A0A1T4RA10_9HYPH) HSP 1 Score: 86.3 bits (212), Expect = 1.580e-14 Identity = 94/314 (29.94%), Postives = 130/314 (41.40%), Query Frame = 2
Query: 365 APLASENVDSSKSSGPLDGLRRFSRD-------GADGVFMGAA-GVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSK-VVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGHRSPIRRPARATMEWSKV----THDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRL 1267
APLA E SS + RF G G ++ G+ +RY + P P G+ V+LL G E++ KY ETI L RGF V T+D GQG S RL +T H++ +Y++DL F + VVLP P H+ ++AHSMGGL+A+ A + MVLAAP++ G++ + A+A + G R P+R A WS + THD RR + LR + PS +W VRA G RRL
Sbjct: 138 APLADETAPEDDSSASREEEVRFFETEENPAPAGLKGGWLTTGDGIHLRYAVCPSALPRTRGT-----VLLLQGRNEAVEKYFETIGDLAARGFMVATFDWRGQGGSDRL----LRNTRRGHVSHLKYYLRDLEAFLQAVVLPDCRPPHV-----------------------------------------ILAHSMGGLIALTGAGNLLNRIDRMVLAAPLIDLPRGRMGPRLRSALASLMHFTGMG-RLPVRHRAGQERRWSALQNPLTHDVRRFQRNRALREGAPSLFLDSPSASW----VRAILAGMRRL 396
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: UPI001FD6C9F9 (alpha/beta hydrolase n=1 Tax=Rhizobium sp. SSM4.3 TaxID=2919917 RepID=UPI001FD6C9F9) HSP 1 Score: 84.7 bits (208), Expect = 1.680e-14 Identity = 81/265 (30.57%), Postives = 114/265 (43.02%), Query Frame = 2
Query: 452 GVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQF-SKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRA 1243
G F G G +RY +F SP+ +G+ +VLL G E++ KY ETI LN+ GF V TYD GQG SGRL D H+ FDHY++DL F ++VLP + LP ++AHS GGL+A+KAA E MVL AP + K S + VA +A G + + A E + +T D R + L + + P+ WL ++ +A
Sbjct: 20 GFFEGYRGARLRYAVFRSSSPKPKGT-----IVLLHGRNETIEKYFETIRDLNEHGFWVATYDFRGQGGSGRL----LKDPRKGHVGRFDHYIRDLEIFLEQIVLP-----------------------------DTRLPF------------FMLAHSTGGLIALKAAPRLSNRIERMVLTAPFVGLGGQKTSPENIRRVAALAAFTGFGQITLNKDEALKRFEGNPLTTDALRFARNQRLFVDHPELALGPPTARWLYESQKA 234
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Match: A0A3B0VQU3_9ZZZZ (Lysophospholipase L2 n=2 Tax=root TaxID=1 RepID=A0A3B0VQU3_9ZZZZ) HSP 1 Score: 85.1 bits (209), Expect = 1.820e-14 Identity = 79/292 (27.05%), Postives = 117/292 (40.07%), Query Frame = 2
Query: 431 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGH-----RSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVSVL 1291
F+ G +GA GV + Y + E S + +V++ G E KY E L D +S Y YDH GQGLSGRL D + F +YV DL +F + V V H+ +L ++AHSMGG +A+ ++E P + GM+L +PML NT N + + T L G P PA+A + + +TH R L + L + P+F WL ++ K+ G L + +L
Sbjct: 70 FTTQFKTGTMLGAGGVAIHYA-------KREISGEQAALVIVDGRTEYTTKYAELFYDLRDMPWSFYIYDHRGQGLSGRL----LRDYQKGDVERFSNYVADLKEFIQTV----VKKKPHK------------------------------------RLFILAHSMGGTIAIIYSIENPGILSGMILCSPMLQINTAPYPNELARLLTAGITDLGGGGFYVFGGGPYN-PAKAFVG-NDLTHSAARFALNKKLLHKFPADELGSPTFKWLYESFEGMKKANAGAGKLRMPIL 308 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1071.962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1071.962.1 >prot_S-firma_F_contig1071.962.1 ID=prot_S-firma_F_contig1071.962.1|Name=mRNA_S-firma_F_contig1071.962.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=415bp MGPLRGAIAVAALSIFCDRSSYAFTAFASRTKSAYVRAAAAASTDPVSLSback to top mRNA from alignment at S-firma_F_contig1071:375..4351- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1071.962.1 ID=mRNA_S-firma_F_contig1071.962.1|Name=mRNA_S-firma_F_contig1071.962.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3977bp|location=Sequence derived from alignment at S-firma_F_contig1071:375..4351- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1071:375..4351- >mRNA_S-firma_F_contig1071.962.1 ID=mRNA_S-firma_F_contig1071.962.1|Name=mRNA_S-firma_F_contig1071.962.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2490bp|location=Sequence derived from alignment at S-firma_F_contig1071:375..4351- (Sphaerotrichia firma ET2_F female)back to top |